RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 LINC00596Q86U02 117 aa17.37■□□□□ 0.37
NEIL3-202ENST00000513321 ANKRD13BQ86YJ7 626 aa17.37■□□□□ 0.37
NEIL3-202ENST00000513321 OR4M1Q8NGD0 313 aa17.37■□□□□ 0.37
NEIL3-202ENST00000513321 TMPRSS13Q9BYE2 586 aa17.37■□□□□ 0.37
NEIL3-202ENST00000513321 NAA50Q9GZZ1 169 aaKnown RBP17.37■□□□□ 0.37
NEIL3-202ENST00000513321 MGST3O14880 152 aa17.36■□□□□ 0.37
NEIL3-202ENST00000513321 SLC2A2P11168 524 aaPredicted RBP17.36■□□□□ 0.37
NEIL3-202ENST00000513321 CFPP27918 469 aa17.36■□□□□ 0.37
NEIL3-202ENST00000513321 UNC119Q13432 240 aa17.36■□□□□ 0.37
NEIL3-202ENST00000513321 SLC16A12Q6ZSM3 486 aa17.36■□□□□ 0.37
NEIL3-202ENST00000513321 C8orf46Q8TAG6 207 aa17.36■□□□□ 0.37
NEIL3-202ENST00000513321 Q96M66 194 aa17.36■□□□□ 0.37
NEIL3-202ENST00000513321 PPA2Q9H2U2 334 aa17.36■□□□□ 0.37
NEIL3-202ENST00000513321 IFT22Q9H7X7 185 aa17.36■□□□□ 0.37
NEIL3-202ENST00000513321 C19orf12Q9NSK7 152 aa17.36■□□□□ 0.37
NEIL3-202ENST00000513321 TMEM160Q9NX00 188 aa17.36■□□□□ 0.37
NEIL3-202ENST00000513321 TRBV23-1A0A0A0MS06 115 aa17.35■□□□□ 0.37
NEIL3-202ENST00000513321 INAFM1C9JVW0 142 aa17.35■□□□□ 0.37
NEIL3-202ENST00000513321 HSPB6O14558 160 aa17.35■□□□□ 0.37
NEIL3-202ENST00000513321 AVPP01185 164 aa17.35■□□□□ 0.37
NEIL3-202ENST00000513321 EDDM3BP56851 147 aa17.35■□□□□ 0.37
NEIL3-202ENST00000513321 VBP1P61758 197 aa17.35■□□□□ 0.37
NEIL3-202ENST00000513321 NCS1P62166 190 aa17.35■□□□□ 0.37
NEIL3-202ENST00000513321 RPL31P62899 125 aaKnown RBP17.35■□□□□ 0.37
NEIL3-202ENST00000513321 EDDM3AQ14507 147 aa17.35■□□□□ 0.37
NEIL3-202ENST00000513321 PAN3Q58A45 887 aaKnown RBP17.35■□□□□ 0.37
NEIL3-202ENST00000513321 FAM120AOSQ5T036 256 aa17.35■□□□□ 0.37
NEIL3-202ENST00000513321 OR2W3Q7Z3T1 314 aa17.35■□□□□ 0.37
NEIL3-202ENST00000513321 MRI1Q9BV20 369 aa17.35■□□□□ 0.37
NEIL3-202ENST00000513321 TMEM59Q9BXS4 323 aa17.35■□□□□ 0.37
NEIL3-202ENST00000513321 WNK2Q9Y3S1 2297 aa17.35■□□□□ 0.37
NEIL3-202ENST00000513321 A0A0B4J203 849 aa17.34■□□□□ 0.37
NEIL3-202ENST00000513321 A0A1W2PQ09 198 aa17.34■□□□□ 0.37
NEIL3-202ENST00000513321 ARF6P62330 175 aa17.34■□□□□ 0.37
NEIL3-202ENST00000513321 RPS27AP62979 156 aaKnown RBP17.34■□□□□ 0.37
NEIL3-202ENST00000513321 ATAD3CQ5T2N8 411 aa17.34■□□□□ 0.37
NEIL3-202ENST00000513321 SFXN4Q6P4A7 337 aa17.34■□□□□ 0.37
NEIL3-202ENST00000513321 C1orf229Q6ZS94 237 aaPredicted RBP17.34■□□□□ 0.37
NEIL3-202ENST00000513321 FAM185AQ8N0U4 392 aa17.34■□□□□ 0.37
NEIL3-202ENST00000513321 BPIFB2Q8N4F0 458 aa17.34■□□□□ 0.37
NEIL3-202ENST00000513321 SUMF2Q8NBJ7 301 aa17.34■□□□□ 0.37
NEIL3-202ENST00000513321 LIN7BQ9HAP6 207 aa17.34■□□□□ 0.37
NEIL3-202ENST00000513321 FBLN5Q9UBX5 448 aa17.34■□□□□ 0.37
NEIL3-202ENST00000513321 OPN4Q9UHM6 478 aa17.34■□□□□ 0.37
NEIL3-202ENST00000513321 DAPK2Q9UIK4 370 aa17.34■□□□□ 0.37
NEIL3-202ENST00000513321 AUP1Q9Y679 476 aa17.34■□□□□ 0.37
NEIL3-202ENST00000513321 SONP18583 2426 aaKnown RBP17.34■□□□□ 0.37
NEIL3-202ENST00000513321 FAM90A10PA6NDY2 464 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 FAM90A18PA6NE21 464 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 FAM90A16PA6NEW6 464 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 FAM90A20PA6NIJ5 464 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 FAM90A8PA6NJQ4 464 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 FAM90A7PA6NKC0 464 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 FAM90A22PA8MWA6 464 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 FAM90A12PA8MX19 464 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 FAM90A5PA8MXJ8 464 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 FAM90A23PA8MXZ1 464 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 GABARAPO95166 117 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 FAM90A15PP0C7V4 464 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 FAM90A13PP0C7W8 464 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 FAM90A14PP0C7W9 464 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 FAM90A24PP0C7X0 464 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 RPS19P39019 145 aaKnown RBP17.33■□□□□ 0.37
NEIL3-202ENST00000513321 AESQ08117 197 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 CTF1Q16619 201 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 TMEM200BQ69YZ2 307 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 BRICD5Q6PL45 260 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 TPRX1Q8N7U7 411 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 POM121Q96HA1 1249 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 DMRTB1Q96MA1 342 aa17.33■□□□□ 0.37
NEIL3-202ENST00000513321 DPCDQ9BVM2 203 aaPredicted RBP17.33■□□□□ 0.37
NEIL3-202ENST00000513321 TMEM272A0A1B0GTI8 110 aa17.32■□□□□ 0.36
NEIL3-202ENST00000513321 LDLRAD4O15165 306 aa17.32■□□□□ 0.36
NEIL3-202ENST00000513321 CSN2P05814 226 aa17.32■□□□□ 0.36
NEIL3-202ENST00000513321 TM2D1Q9BX74 207 aa17.32■□□□□ 0.36
NEIL3-202ENST00000513321 LPAR5Q9H1C0 372 aa17.32■□□□□ 0.36
NEIL3-202ENST00000513321 SPACA1Q9HBV2 294 aa17.32■□□□□ 0.36
NEIL3-202ENST00000513321 ING3Q9NXR8 418 aa17.32■□□□□ 0.36
NEIL3-202ENST00000513321 ONECUT1Q9UBC0 465 aa17.32■□□□□ 0.36
NEIL3-202ENST00000513321 IL1AP01583 271 aa17.31■□□□□ 0.36
NEIL3-202ENST00000513321 ERP29P30040 261 aaKnown RBP17.31■□□□□ 0.36
NEIL3-202ENST00000513321 SERPINB10P48595 397 aa17.31■□□□□ 0.36
NEIL3-202ENST00000513321 P2RX3P56373 397 aa17.31■□□□□ 0.36
NEIL3-202ENST00000513321 MEF2CQ06413 473 aaPredicted RBP17.31■□□□□ 0.36
NEIL3-202ENST00000513321 PLA2G7Q13093 441 aa17.31■□□□□ 0.36
NEIL3-202ENST00000513321 ATXN7L3Q14CW9 347 aaPredicted RBP17.31■□□□□ 0.36
NEIL3-202ENST00000513321 SIGIRRQ6IA17 410 aa17.31■□□□□ 0.36
NEIL3-202ENST00000513321 IL17RELQ6ZVW7 336 aa17.31■□□□□ 0.36
NEIL3-202ENST00000513321 CLVS1Q8IUQ0 354 aaPredicted RBP17.31■□□□□ 0.36
NEIL3-202ENST00000513321 COQ2Q96H96 371 aa17.31■□□□□ 0.36
NEIL3-202ENST00000513321 NICN1Q9BSH3 213 aa17.31■□□□□ 0.36
NEIL3-202ENST00000513321 URM1Q9BTM9 101 aaKnown RBP17.31■□□□□ 0.36
NEIL3-202ENST00000513321 RCC2Q9P258 522 aaKnown RBP17.31■□□□□ 0.36
NEIL3-202ENST00000513321 RAB22AQ9UL26 194 aa17.31■□□□□ 0.36
NEIL3-202ENST00000513321 PEX16Q9Y5Y5 336 aa17.31■□□□□ 0.36
NEIL3-202ENST00000513321 MEX3AA1L020 520 aaKnown RBP17.31■□□□□ 0.36
NEIL3-202ENST00000513321 FUT3P21217 361 aa17.31■□□□□ 0.36
NEIL3-202ENST00000513321 GLIPR1P48060 266 aa17.31■□□□□ 0.36
NEIL3-202ENST00000513321 KRBOX4Q5JUW0 171 aa17.31■□□□□ 0.36
NEIL3-202ENST00000513321 IDNKQ5T6J7 187 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms