RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 PEBP1P30086 187 aaKnown RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 DCTDP32321 178 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 SPCS2Q15005 226 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 ACOT7LQ6ZUV0 252 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 CCDC190Q86UF4 302 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 TCTEX1D1Q8N7M0 179 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 OR8G5Q8NG78 346 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 OR10A7Q8NGE5 316 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 HGDQ93099 445 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 OR2V2Q96R30 315 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 FAAP24Q9BTP7 215 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 MSRB2Q9Y3D2 182 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 TRAV30A0A087WSZ9 112 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 C3orf85A0A1B0GTC6 90 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 KCNAB3O43448 404 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 SCO1O75880 301 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 GYPAP02724 150 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 RAB5AP20339 215 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 RPS10P46783 165 aaKnown RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 GPNMBQ14956 572 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 FAM209BQ5JX69 171 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 MMD2Q8IY49 270 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 ZNF486Q96H40 463 aaPredicted RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 AUNIPQ9H7T9 357 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 MSL2Q9HCI7 577 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 SLC7A10Q9NS82 523 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 RFPL4AA6NLU0 287 aa3.71□□□□□ -1.81
VCAN-209ENST00000513016 RFPL4AL1F8VTS6 287 aa3.71□□□□□ -1.81
VCAN-209ENST00000513016 RECKO95980 971 aa3.71□□□□□ -1.81
VCAN-209ENST00000513016 HMGA2P52926 109 aa3.71□□□□□ -1.81
VCAN-209ENST00000513016 LCN15Q6UWW0 184 aa3.71□□□□□ -1.81
VCAN-209ENST00000513016 LINC01560Q8TB33 94 aa3.71□□□□□ -1.81
VCAN-209ENST00000513016 SCARB1Q8WTV0 552 aa3.71□□□□□ -1.81
VCAN-209ENST00000513016 TCRBV5S2A0A599 114 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 OR2A4O95047 310 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 HIST1H1BP16401 226 aaKnown RBP3.71□□□□□ -1.82
VCAN-209ENST00000513016 GLRXP35754 106 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 LIMK1P53667 647 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 COL10A1Q03692 680 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 NRN1LQ496H8 165 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 DERL3Q96Q80 235 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 OR2A7Q96R45 310 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 RNF122Q9H9V4 155 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 NTN4Q9HB63 628 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 IDI2-AS1Q9NZ38 188 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 ZNF629Q9UEG4 869 aaPredicted RBP3.71□□□□□ -1.82
VCAN-209ENST00000513016 NAGKQ9UJ70 344 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 RALYQ9UKM9 306 aaKnown RBP3.71□□□□□ -1.82
VCAN-209ENST00000513016 WASHC3Q9Y3C0 194 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 MRPS18CQ9Y3D5 142 aaKnown RBP3.71□□□□□ -1.82
VCAN-209ENST00000513016 LOXHD1Q8IVV2 1947 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 DCTN6O00399 190 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 ACSM4P0C7M7 580 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 PMELP40967 661 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 CLDN20P56880 219 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 SLC38A11Q08AI6 406 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 UNQ5815/PRO19632Q6UWF5 114 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 LIAT1Q6ZQX7 453 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 WFDC3Q8IUB2 231 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 STARD4Q96DR4 205 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 MOGAT1Q96PD6 335 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 METTL26Q96S19 204 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 CCL13Q99616 98 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 NPAS1Q99742 590 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 PKIBQ9C010 78 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 ASCL3Q9NQ33 180 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 TECRQ9NZ01 308 aaKnown RBP3.71□□□□□ -1.82
VCAN-209ENST00000513016 UBR3Q6ZT12 1888 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 ZNF727A8MUV8 499 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 J3QKU1 62 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 PLPP2O43688 288 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 SYNGR1O43759 233 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 OR4E1P0C645 316 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 TSPOP30536 169 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 TBR1Q16650 682 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 MAMSTRQ6ZN01 415 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 C20orf204Q6ZNR8 217 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 ARHGAP5-AS1Q96IT6 56 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 ADGRL4Q9HBW9 690 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 STARD10Q9Y365 291 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 MAGEB4O15481 346 aaPredicted RBP3.71□□□□□ -1.82
VCAN-209ENST00000513016 CHST1O43916 411 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 TGFAP01135 160 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 TRAPPC2P0DI81 140 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 TRAPPC2BP0DI82 140 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 GLI4P10075 376 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 BCL3P20749 454 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 RPS19P39019 145 aaKnown RBP3.71□□□□□ -1.82
VCAN-209ENST00000513016 EXOSC2Q13868 293 aaKnown RBP3.71□□□□□ -1.82
VCAN-209ENST00000513016 SURF2Q15527 256 aaPredicted RBP3.71□□□□□ -1.82
VCAN-209ENST00000513016 RHOUQ7L0Q8 258 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 RTN4RL2Q86UN3 420 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 PXT1Q8NFP0 134 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 PRSS50Q9UI38 385 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 IGHV3OR15-7A0A075B7D8 119 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 RPL36A-HNRNPH2H7BZ11 118 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 GPANK1O95872 356 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 ERGP11308 486 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 AMTP48728 403 aa3.71□□□□□ -1.82
VCAN-209ENST00000513016 ATP5G2Q06055 141 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms