RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 FAM90A14PP0C7W9 464 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 FAM90A24PP0C7X0 464 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 SLC2A5P22732 501 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 ERVK11-1P61568 191 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 EFNB1P98172 346 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 CXorf66Q5JRM2 361 aaPredicted RBP9.07□□□□□ -0.96
RNF4-216ENST00000511859 ZNF684Q5T5D7 378 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 ZNF691Q5VV52 312 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 ZNF429Q86V71 674 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 OR8J1Q8NGP2 316 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 CNIH3Q8TBE1 160 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 AMELYQ99218 206 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 APOL4Q9BPW4 351 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 LINC00527Q9UJ94 153 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 UBE2J1Q9Y385 318 aaPredicted RBP9.07□□□□□ -0.96
RNF4-216ENST00000511859 HERC2O95714 4834 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 RBMY1BA6NDE4 496 aaKnown RBP9.06□□□□□ -0.96
RNF4-216ENST00000511859 RBMY1EA6NEQ0 496 aaKnown RBP9.06□□□□□ -0.96
RNF4-216ENST00000511859 CCDC182A6NF36 153 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 LY6LH3BQJ8 138 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 BUB1B-PAK6H3BSN5 160 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 SELENOFO60613 162 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 MMP23AO75900 390 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 APOL3O95236 402 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 RPLP1P05386 114 aaKnown RBP9.06□□□□□ -0.96
RNF4-216ENST00000511859 LYNP07948 512 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 HCKP08631 526 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 RBMY1DP0C7P1 496 aaKnown RBP9.06□□□□□ -0.96
RNF4-216ENST00000511859 MPZP25189 248 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 GSTT1P30711 240 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 HCCSP53701 268 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 PRRX1P54821 245 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 PSMA6P60900 246 aaKnown RBP9.06□□□□□ -0.96
RNF4-216ENST00000511859 FHL3Q13643 280 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 EDDM3AQ14507 147 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 SMN1Q16637 294 aaKnown RBP9.06□□□□□ -0.96
RNF4-216ENST00000511859 TPTE2P1Q5T6R2 138 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 AADACL4Q5VUY2 407 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 SLC35E3Q7Z769 313 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 C5orf56Q8N8D9 126 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 RNFT2Q96EX2 444 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 TEAD3Q99594 435 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 SEBOXQ9HB31 216 aaPredicted RBP9.06□□□□□ -0.96
RNF4-216ENST00000511859 AMBNQ9NP70 447 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 ENPP5Q9UJA9 477 aa9.06□□□□□ -0.96
RNF4-216ENST00000511859 H0YJX3 145 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 AP4M1O00189 453 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 TOR1AO14656 332 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 PRODHO43272 600 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 ELANEP08246 267 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 GABRB1P18505 474 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 SNRPGP62308 76 aaKnown RBP9.05□□□□□ -0.96
RNF4-216ENST00000511859 FOXE3Q13461 319 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 HLA-DRB5Q30154 266 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 NXNL2Q5VZ03 156 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 HEPN1Q6WQI6 88 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 C8orf59Q8N0T1 100 aaPredicted RBP9.05□□□□□ -0.96
RNF4-216ENST00000511859 RNF152Q8N8N0 203 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 ZNF454Q8N9F8 522 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 SETD9Q8NE22 299 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 RHOXF1Q8NHV9 184 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 OTOSQ8NHW6 89 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 IL17DQ8TAD2 202 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 THEM6Q8WUY1 208 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 APH1BQ8WW43 257 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 CNBD2Q96M20 576 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 TTTY10Q9BZA0 68 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 GAL3ST2Q9H3Q3 398 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 PCDHB16Q9NRJ7 776 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 CLN6Q9NWW5 311 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 GLS2Q9UI32 602 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.05□□□□□ -0.96
RNF4-216ENST00000511859 PIGLQ9Y2B2 252 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 KMT2AQ03164 3969 aa9.05□□□□□ -0.96
RNF4-216ENST00000511859 TMEM82A0PJX8 343 aa9.04□□□□□ -0.96
RNF4-216ENST00000511859 PQLC2LA1A4F0 135 aa9.04□□□□□ -0.96
RNF4-216ENST00000511859 WBP4O75554 376 aaKnown RBP9.04□□□□□ -0.96
RNF4-216ENST00000511859 MYF6P23409 242 aa9.04□□□□□ -0.96
RNF4-216ENST00000511859 CD34P28906 385 aa9.04□□□□□ -0.96
RNF4-216ENST00000511859 ERP29P30040 261 aaKnown RBP9.04□□□□□ -0.96
RNF4-216ENST00000511859 HSPA13P48723 471 aa9.04□□□□□ -0.96
RNF4-216ENST00000511859 ISL1P61371 349 aa9.04□□□□□ -0.96
RNF4-216ENST00000511859 IL24Q13007 206 aa9.04□□□□□ -0.96
RNF4-216ENST00000511859 GPR50Q13585 617 aa9.04□□□□□ -0.96
RNF4-216ENST00000511859 GRK1Q15835 563 aa9.04□□□□□ -0.96
RNF4-216ENST00000511859 SLC35D3Q5M8T2 416 aa9.04□□□□□ -0.96
RNF4-216ENST00000511859 CLVS2Q5SYC1 327 aa9.04□□□□□ -0.96
RNF4-216ENST00000511859 TRAPPC6BQ86SZ2 158 aa9.04□□□□□ -0.96
RNF4-216ENST00000511859 GID4Q8IVV7 300 aa9.04□□□□□ -0.96
RNF4-216ENST00000511859 BATF2Q8N1L9 274 aa9.04□□□□□ -0.96
RNF4-216ENST00000511859 TPRX1Q8N7U7 411 aa9.04□□□□□ -0.96
RNF4-216ENST00000511859 OR11H1Q8NG94 326 aa9.04□□□□□ -0.96
RNF4-216ENST00000511859 C4orf3Q8WVX3 66 aa9.04□□□□□ -0.96
RNF4-216ENST00000511859 TRUB1Q8WWH5 349 aaKnown RBP9.04□□□□□ -0.96
RNF4-216ENST00000511859 TBX5Q99593 518 aa9.04□□□□□ -0.96
RNF4-216ENST00000511859 ZNF184Q99676 751 aaPredicted RBP9.04□□□□□ -0.96
RNF4-216ENST00000511859 PKIBQ9C010 78 aa9.04□□□□□ -0.96
RNF4-216ENST00000511859 HECTD4Q9Y4D8 3996 aa9.03□□□□□ -0.96
RNF4-216ENST00000511859 MPZL2O60487 215 aa9.03□□□□□ -0.96
RNF4-216ENST00000511859 IGLV3-1P01715 115 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms