RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 LINC00312Q9Y6C7 94 aa13.12□□□□□ -0.31
PDLIM5-216ENST00000511767 TRAV24A0A0B4J272 114 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 PNMA8CA0A1B0GUJ8 204 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 MYL12BO14950 172 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 GPR137BO60478 399 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 HTR3BO95264 441 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 IGHV1-8P0DP01 117 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 ZNF44P15621 663 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 OMGP23515 440 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 COX7A1P24310 79 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 OR3A4PP47883 348 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 GLIPR1P48060 266 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 P2RX3P56373 397 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 PPP3R1P63098 170 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 BDH1Q02338 343 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 ZNF782Q6ZMW2 699 aaPredicted RBP13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 LYPD6Q86Y78 171 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 OR11H6Q8NGC7 330 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 OR10K1Q8NGX5 313 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 CPNE2Q96FN4 548 aaPredicted RBP13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 ZNF714Q96N38 554 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 OR14A2Q96R54 314 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 ANKRD60Q9BZ19 345 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 FOXJ3Q9UPW0 622 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 LSM2Q9Y333 95 aaKnown RBP13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 UBE2J1Q9Y385 318 aaPredicted RBP13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 TPRKBQ9Y3C4 175 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 MMP24Q9Y5R2 645 aa13.11□□□□□ -0.31
PDLIM5-216ENST00000511767 FUOMA2VDF0 154 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 MAGEA13PA6NCF6 341 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 MMP23AO75900 390 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 NDUFA7O95182 113 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 PAHP00439 452 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 CRYBA1P05813 215 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 CSN2P05814 226 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 CGB3P0DN86 165 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 CGB7P0DN87 165 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 PAX6P26367 422 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 GP2P55259 537 aaKnown RBP13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 GPR50Q13585 617 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 RSU1Q15404 277 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 SPHARQ15513 63 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 LDLRAD2Q5SZI1 272 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 DDI2Q5TDH0 399 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 CDH26Q8IXH8 852 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 PIFOQ8TCI5 191 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 COQ2Q96H96 371 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 DERL3Q96Q80 235 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 ZNF184Q99676 751 aaPredicted RBP13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 SSX3Q99909 188 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 MND1Q9BWT6 205 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 METTL9Q9H1A3 318 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 PPA2Q9H2U2 334 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 VCX3BQ9H321 246 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 NCOR1P1Q9H4R4 102 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 IL36GQ9NZH8 169 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 FBN3Q75N90 2809 aa13.1□□□□□ -0.31
PDLIM5-216ENST00000511767 HAX1O00165 279 aa13.09□□□□□ -0.31
PDLIM5-216ENST00000511767 MDKP21741 143 aaPredicted RBP13.09□□□□□ -0.31
PDLIM5-216ENST00000511767 LGALS4P56470 323 aa13.09□□□□□ -0.31
PDLIM5-216ENST00000511767 RPL15P61313 204 aaKnown RBP13.09□□□□□ -0.31
PDLIM5-216ENST00000511767 IL13RA2Q14627 380 aa13.09□□□□□ -0.31
PDLIM5-216ENST00000511767 AANATQ16613 207 aa13.09□□□□□ -0.31
PDLIM5-216ENST00000511767 LHFPL4Q7Z7J7 247 aa13.09□□□□□ -0.31
PDLIM5-216ENST00000511767 MS4A15Q8N5U1 240 aa13.09□□□□□ -0.31
PDLIM5-216ENST00000511767 OR13D1Q8NGV5 346 aa13.09□□□□□ -0.31
PDLIM5-216ENST00000511767 TAS2R3Q9NYW6 316 aa13.09□□□□□ -0.31
PDLIM5-216ENST00000511767 CKLFQ9UBR5 152 aa13.09□□□□□ -0.31
PDLIM5-216ENST00000511767 NBEAL1Q6ZS30 2694 aa13.08□□□□□ -0.31
PDLIM5-216ENST00000511767 ODAMA1E959 279 aa13.08□□□□□ -0.32
PDLIM5-216ENST00000511767 ODF3BA8MYP8 253 aa13.08□□□□□ -0.32
PDLIM5-216ENST00000511767 FSTP19883 344 aa13.08□□□□□ -0.32
PDLIM5-216ENST00000511767 CRHBPP24387 322 aa13.08□□□□□ -0.32
PDLIM5-216ENST00000511767 INSL4Q14641 139 aa13.08□□□□□ -0.32
PDLIM5-216ENST00000511767 PIGYQ3MUY2 71 aa13.08□□□□□ -0.32
PDLIM5-216ENST00000511767 ACSM3Q53FZ2 586 aa13.08□□□□□ -0.32
PDLIM5-216ENST00000511767 NHLRC3Q5JS37 347 aa13.08□□□□□ -0.32
PDLIM5-216ENST00000511767 KRBOX4Q5JUW0 171 aa13.08□□□□□ -0.32
PDLIM5-216ENST00000511767 ZNF626Q68DY1 528 aa13.08□□□□□ -0.32
PDLIM5-216ENST00000511767 IZUMO2Q6UXV1 221 aa13.08□□□□□ -0.32
PDLIM5-216ENST00000511767 DYNAPQ8N1N2 210 aa13.08□□□□□ -0.32
PDLIM5-216ENST00000511767 OR5R1Q8NH85 324 aa13.08□□□□□ -0.32
PDLIM5-216ENST00000511767 MALSU1Q96EH3 234 aa13.08□□□□□ -0.32
PDLIM5-216ENST00000511767 FAM192AQ9GZU8 254 aa13.08□□□□□ -0.32
PDLIM5-216ENST00000511767 VPREB3Q9UKI3 123 aa13.08□□□□□ -0.32
PDLIM5-216ENST00000511767 ST3GAL6Q9Y274 331 aa13.08□□□□□ -0.32
PDLIM5-216ENST00000511767 SESN1Q9Y6P5 492 aa13.08□□□□□ -0.32
PDLIM5-216ENST00000511767 TRGV10A0A0A0MS01 117 aa13.07□□□□□ -0.32
PDLIM5-216ENST00000511767 A0A1B0GUS0 222 aa13.07□□□□□ -0.32
PDLIM5-216ENST00000511767 ZNF780AO75290 641 aaPredicted RBP13.07□□□□□ -0.32
PDLIM5-216ENST00000511767 ATP6V1G2O95670 118 aa13.07□□□□□ -0.32
PDLIM5-216ENST00000511767 MAS1P04201 325 aa13.07□□□□□ -0.32
PDLIM5-216ENST00000511767 ARG1P05089 322 aa13.07□□□□□ -0.32
PDLIM5-216ENST00000511767 CD37P11049 281 aa13.07□□□□□ -0.32
PDLIM5-216ENST00000511767 RAG2P55895 527 aa13.07□□□□□ -0.32
PDLIM5-216ENST00000511767 TPBGQ13641 420 aa13.07□□□□□ -0.32
PDLIM5-216ENST00000511767 C17orf58Q2M2W7 97 aa13.07□□□□□ -0.32
PDLIM5-216ENST00000511767 HEPN1Q6WQI6 88 aa13.07□□□□□ -0.32
PDLIM5-216ENST00000511767 GDPGP1Q6ZNW5 385 aa13.07□□□□□ -0.32
PDLIM5-216ENST00000511767 OSR2Q8N2R0 312 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms