RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 C17orf107Q6ZR85 190 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 GDPD3Q7L5L3 318 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 VMO1Q7Z5L0 202 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 FAM185AQ8N0U4 392 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 BPIFB2Q8N4F0 458 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 JAGN1Q8N5M9 183 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 NKAIN3Q8N8D7 197 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 CHST4Q8NCG5 386 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 Q8NFD4 153 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 OR4M1Q8NGD0 313 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 PPP1R35Q8TAP8 253 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 C22orf15Q8WYQ4 148 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 PHYHIPQ92561 330 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 TBX15Q96SF7 602 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 SUCNR1Q9BXA5 334 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 SIRPDQ9H106 197 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 SLITRK2Q9H156 845 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 MMP27Q9H306 513 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 RNF167Q9H6Y7 350 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 METTL8Q9H825 291 aaKnown RBP5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 PLGRKTQ9HBL7 147 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 C19orf12Q9NSK7 152 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 TXNL4BQ9NX01 149 aaKnown RBP5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 IL36GQ9NZH8 169 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 ZNF69Q9UC07 566 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 NAV3Q8IVL0 2385 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 SVEP1Q4LDE5 3571 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 DOCK11Q5JSL3 2073 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 NF1P21359 2839 aa5.89□□□□□ -1.47
PDLIM5-215ENST00000511586 WNK2Q9Y3S1 2297 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 IGHV3OR16-10A0A075B7F0 116 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 TRAV40A0A0B4J280 105 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 IGHV1-69DA0A0B4J2H0 117 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 A0A0G2JK05 382 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 CENPVL3A0A0U1RRI6 287 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 TRDV1A0A1B0GX56 115 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 hCG_1809904A0A1W2PP81 198 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 A0A1W2PPE2 198 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 A0A1W2PR64 198 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 A0A1W2PRV1 198 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 TMEM82A0PJX8 343 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 SIRPB1O00241 398 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 MGST3O14880 152 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 PSPNO60542 156 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 ARL6IP5O75915 188 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 CDRT1O95170 752 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 IL1AP01583 271 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 IGHV1-69P01742 117 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 UCHL1P09936 223 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 IGHV4-38-2P0DP08 117 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 GTF2F2P13984 249 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 SRMP19623 302 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 GALP22466 123 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 FGF9P31371 208 aaPredicted RBP5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 RORCP51449 518 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 EDDM3BP56851 147 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 FABP5Q01469 135 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 MXD1Q05195 221 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 MEF2CQ06413 473 aaPredicted RBP5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 IL13RA2Q14627 380 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 GRK1Q15835 563 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 HSD17B12Q53GQ0 312 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 FAM27D1Q5T7N8 215 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 GLT8D1Q68CQ7 371 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 Q6P435 159 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 C16orf87Q6PH81 154 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 CD200R1LQ6Q8B3 271 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 METAP1DQ6UB28 335 aaPredicted RBP5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 RBMS3Q6XE24 437 aaKnown RBP5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 TMEM91Q6ZNR0 172 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 LINC00299Q6ZSB3 139 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 C9orf139Q6ZV77 190 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 BCL6BQ8N143 479 aaPredicted RBP5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 OSR2Q8N2R0 312 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 Q8N7P7 452 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 OR4S1Q8NGB4 309 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 OR51T1Q8NGJ9 327 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 OR10K1Q8NGX5 313 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 LHX4Q969G2 390 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 BORCS5Q969J3 196 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 FOXRED1Q96CU9 486 aaPredicted RBP5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 JMJD8Q96S16 334 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 NKX3-1Q99801 234 aaPredicted RBP5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 SLC6A7Q99884 636 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 UQCC2Q9BRT2 126 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 WDR12Q9GZL7 423 aaKnown RBP5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 SLIRPQ9GZT3 109 aaKnown RBP5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 CHST6Q9GZX3 395 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 PPIL3Q9H2H8 161 aaKnown RBP5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 GHRLQ9UBU3 117 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 MRPS28Q9Y2Q9 187 aaKnown RBP5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 SF3B6Q9Y3B4 125 aaKnown RBP5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 A3GALT2U3KPV4 340 aa5.88□□□□□ -1.47
PDLIM5-215ENST00000511586 JMJD1CQ15652 2540 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 hADV38S2A0JD32 116 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 FUOMA2VDF0 154 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 SLC33A1O00400 549 aaPredicted RBP5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 CSN2P05814 226 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 SERPINA2P20848 420 aa5.87□□□□□ -1.47
PDLIM5-215ENST00000511586 PRTN3P24158 256 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms