RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 RIMS4Q9H426 269 aaPredicted RBP12.25□□□□□ -0.45
AP003555.1-202ENST00000511013 PLK3Q9H4B4 646 aa12.25□□□□□ -0.45
AP003555.1-202ENST00000511013 CALHM2Q9HA72 323 aa12.25□□□□□ -0.45
AP003555.1-202ENST00000511013 RCL1Q9Y2P8 373 aaKnown RBP12.25□□□□□ -0.45
AP003555.1-202ENST00000511013 UBE2J1Q9Y385 318 aaPredicted RBP12.25□□□□□ -0.45
AP003555.1-202ENST00000511013 KPTNQ9Y664 436 aa12.25□□□□□ -0.45
AP003555.1-202ENST00000511013 TNRC6AQ8NDV7 1962 aaKnown RBP12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 KIR2DS1A0A191URI9 304 aa12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 DUXBA0A1W2PPF3 345 aa12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 C21orf140B9A014 251 aa12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 NDUFA2O43678 99 aa12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 NAPSAO96009 420 aa12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 SPP1P10451 314 aa12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 CCNOP22674 350 aa12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 CD80P33681 288 aa12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 KIR2DS4P43632 304 aa12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 PLP2Q04941 152 aa12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 KIR2DS1Q14954 304 aa12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 IGSF11Q5DX21 431 aa12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 LINC00596Q86U02 117 aa12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 TUSC5Q8IXB3 177 aa12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 SLC35G3Q8N808 338 aa12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 OR52M1Q8NGK5 317 aa12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 WNT2BQ93097 391 aa12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 SLAMF9Q96A28 289 aa12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 TP53RKQ96S44 253 aa12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 SPACA1Q9HBV2 294 aa12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 PRDM6Q9NQX0 595 aa12.24□□□□□ -0.45
AP003555.1-202ENST00000511013 A0A096LPE4 126 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 PIGBOS1A0A0B4J2F0 54 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 A0A1W2PPZ6 126 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 AGPAT2O15120 278 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 F12P00748 615 aaPredicted RBP12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 HLA-HP01893 362 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 OR8U9P0C7N5 309 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 RFC3P40938 356 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 HAAOP46952 286 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 CAMLGP49069 296 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 GPM6AP51674 278 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 UCP2P55851 309 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 DAZAP2Q15038 168 aaPredicted RBP12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 RNPS1Q15287 305 aaKnown RBP12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 TMEM164Q5U3C3 297 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 MEX3BQ6ZN04 569 aaKnown RBP12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 Q6ZPA2 131 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 ZNF695Q8IW36 515 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 KDF1Q8NAX2 398 aaPredicted RBP12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 DMBX1Q8NFW5 382 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 OR8U1Q8NH10 309 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 GTF3AQ92664 365 aaKnown RBP12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 APH1AQ96BI3 265 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 TMEM56Q96MV1 263 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 WFDC1Q9HC57 220 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 TMEM56-RWDD3S4R434 201 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 USP34Q70CQ2 3546 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 PCSK5Q92824 1860 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 ZNF732B4DXR9 585 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 GLI4P10075 376 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 GNRHRP30968 328 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 SNCAP37840 140 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 OR1C1Q15619 314 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 SPIN3Q5JUX0 258 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 C9orf135Q5VTT2 229 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 BSCL2Q96G97 398 aaPredicted RBP12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 SIGLEC12Q96PQ1 595 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 SLC25A31Q9H0C2 315 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 SMOC1Q9H4F8 434 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 SMCO4Q9NRQ5 59 aa12.23□□□□□ -0.45
AP003555.1-202ENST00000511013 FREM1Q5H8C1 2179 aa12.22□□□□□ -0.45
AP003555.1-202ENST00000511013 KMT2EQ8IZD2 1858 aa12.22□□□□□ -0.45
AP003555.1-202ENST00000511013 C9orf172C9J069 976 aa12.22□□□□□ -0.45
AP003555.1-202ENST00000511013 SS18L1O75177 396 aaPredicted RBP12.22□□□□□ -0.45
AP003555.1-202ENST00000511013 NKX2-1P43699 371 aaPredicted RBP12.22□□□□□ -0.45
AP003555.1-202ENST00000511013 KCNJ3P48549 501 aa12.22□□□□□ -0.45
AP003555.1-202ENST00000511013 RAB1AP62820 205 aa12.22□□□□□ -0.45
AP003555.1-202ENST00000511013 PLGLB1Q02325 96 aa12.22□□□□□ -0.45
AP003555.1-202ENST00000511013 TBC1D26Q86UD7 250 aa12.22□□□□□ -0.45
AP003555.1-202ENST00000511013 MCEMP1Q8IX19 187 aa12.22□□□□□ -0.45
AP003555.1-202ENST00000511013 NEK7Q8TDX7 302 aa12.22□□□□□ -0.45
AP003555.1-202ENST00000511013 HPSE2Q8WWQ2 592 aa12.22□□□□□ -0.45
AP003555.1-202ENST00000511013 TTTY12Q9BZ98 90 aa12.22□□□□□ -0.45
AP003555.1-202ENST00000511013 C19orf12Q9NSK7 152 aa12.22□□□□□ -0.45
AP003555.1-202ENST00000511013 CACFD1Q9UGQ2 172 aa12.22□□□□□ -0.45
AP003555.1-202ENST00000511013 MPC1Q9Y5U8 109 aa12.22□□□□□ -0.45
AP003555.1-202ENST00000511013 NKX2-6A6NCS4 301 aa12.21□□□□□ -0.45
AP003555.1-202ENST00000511013 FAM166BA8MTA8 275 aa12.21□□□□□ -0.45
AP003555.1-202ENST00000511013 FAM157AC9JC47 383 aa12.21□□□□□ -0.45
AP003555.1-202ENST00000511013 TUSC2O75896 110 aa12.21□□□□□ -0.45
AP003555.1-202ENST00000511013 MMP9P14780 707 aa12.21□□□□□ -0.45
AP003555.1-202ENST00000511013 ITGA3P26006 1051 aa12.21□□□□□ -0.45
AP003555.1-202ENST00000511013 S100GP29377 79 aa12.21□□□□□ -0.45
AP003555.1-202ENST00000511013 ZNF616Q08AN1 781 aa12.21□□□□□ -0.45
AP003555.1-202ENST00000511013 MIDNQ504T8 468 aa12.21□□□□□ -0.45
AP003555.1-202ENST00000511013 AVPI1Q5T686 147 aa12.21□□□□□ -0.45
AP003555.1-202ENST00000511013 CLEC9AQ6UXN8 241 aa12.21□□□□□ -0.45
AP003555.1-202ENST00000511013 SELENOHQ8IZQ5 122 aaKnown RBP12.21□□□□□ -0.45
AP003555.1-202ENST00000511013 OR2C3Q8N628 320 aa12.21□□□□□ -0.45
AP003555.1-202ENST00000511013 SECTM1Q8WVN6 248 aa12.21□□□□□ -0.45
AP003555.1-202ENST00000511013 POM121L2Q96KW2 1035 aa12.21□□□□□ -0.45
AP003555.1-202ENST00000511013 GUCD1Q96NT3 240 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms