RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 CDK2P24941 298 aa5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 PTAFRP25105 342 aa5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 OTX1P32242 354 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 CSNK1A1P48729 337 aa5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 DNASE1L1P49184 302 aa5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 POU3F4P49335 361 aa5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 ECH1Q13011 328 aa5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 ARL6IP1Q15041 203 aa5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 TMEM176BQ3YBM2 270 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 HES5Q5TA89 166 aa5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 C16orf47Q6ZP98 133 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 NCCRP1Q6ZVX7 275 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 MYPOPQ86VE0 399 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 SIAH3Q8IW03 269 aa5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 SLC22A24Q8N4F4 322 aa5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 MED28Q9H204 178 aa5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 METTL17Q9H7H0 456 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 PROK2Q9HC23 129 aa5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 GPN1Q9HCN4 374 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 MYOZ1Q9NP98 299 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 TMEM138Q9NPI0 162 aa5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 MED29Q9NX70 200 aa5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 DKKL1Q9UK85 242 aa5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 RAB22AQ9UL26 194 aa5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 BOKQ9UMX3 212 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 LHFPL6Q9Y693 200 aa5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 NCOA6Q14686 2063 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-206ENST00000509857 CIB4A0PJX0 185 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 C17orf51A8MQB3 221 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 NPIPA2E9PIF3 369 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 NPIPA3F8WFD2 350 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 TNRC18O15417 2968 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 SYT7O43581 403 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 GMFGO60234 142 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 LRP3O75074 770 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 IGLV3-1P01715 115 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 TTRP02766 147 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 CD3GP09693 182 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 ACSM4P0C7M7 580 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 CCL3P10147 92 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 ANXA3P12429 323 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 CD59P13987 128 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 C4BPBP20851 252 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 CNR1P21554 472 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 S100A1P23297 94 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 PRSS3P35030 304 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 ALDH3B1P43353 468 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 MRPS15P82914 257 aaKnown RBP5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 GALK2Q01415 458 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 FMODQ06828 376 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 CD300CQ08708 224 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 CDK10Q15131 360 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 GSG1Q2KHT4 349 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 C2orf76Q3KRA6 126 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 ACER2Q5QJU3 275 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 RAET1LQ5VY80 246 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 RTL6Q6ICC9 239 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 SLC25A25Q6KCM7 469 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 UTS2BQ765I0 119 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 GLRX5Q86SX6 157 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 LUZP2Q86TE4 346 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 NAXDQ8IW45 347 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 C20orf196Q8IYI0 205 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 TMEM123Q8N131 208 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 SPICQ8N5J4 248 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 TMEM229BQ8NBD8 167 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 OR9K2Q8NGE7 335 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 OR51A4Q8NGJ6 313 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 OR10AC1Q8NH08 325 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 ZFAND1Q8TCF1 268 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 GPX8Q8TED1 209 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 CT55Q8WUE5 264 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 PP6455Q8WZ26 134 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 CPNE4Q96A23 557 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 TMEM45BQ96B21 275 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 CPNE2Q96FN4 548 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 WBP1Q96G27 269 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 RNF170Q96K19 258 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 ZFP3Q96NJ6 502 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 SLC25A21Q9BQT8 299 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 PBOV1Q9GZY1 135 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 OR51J1Q9H342 316 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 AKIRIN1Q9H9L7 192 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 RNF122Q9H9V4 155 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 ZNF160Q9HCG1 818 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 HRASLSQ9HDD0 168 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 NUDT15Q9NV35 164 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 ING4Q9UNL4 249 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 MRPS7Q9Y2R9 242 aaKnown RBP5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 POLR1DQ9Y2S0 133 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 NPTNQ9Y639 398 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 KIAA1549Q9HCM3 1950 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 AHCTF1Q8WYP5 2266 aa5.67□□□□□ -1.5
TRAPPC11-206ENST00000509857 PCNX2A6NKB5 2137 aa5.66□□□□□ -1.5
TRAPPC11-206ENST00000509857 IGKV1D-43A0A0B4J1Z2 117 aa5.66□□□□□ -1.5
TRAPPC11-206ENST00000509857 A0A1B0GTI1 187 aa5.66□□□□□ -1.5
TRAPPC11-206ENST00000509857 LINC00854A0A1B0GVQ3 168 aa5.66□□□□□ -1.5
TRAPPC11-206ENST00000509857 CA11O75493 328 aa5.66□□□□□ -1.5
TRAPPC11-206ENST00000509857 MTRF1O75570 445 aaKnown RBP5.66□□□□□ -1.5
TRAPPC11-206ENST00000509857 NDUFB6O95139 128 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms