RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 SIRPB1O00241 398 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 SLC33A1O00400 549 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 RGS10O43665 173 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 MMP23AO75900 390 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 CDRT1O95170 752 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 OR2H2O95918 312 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 TK1P04183 234 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 PPIAL4GP0DN37 164 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 JUNBP17275 347 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 PRKACBP22694 351 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 CPT2P23786 658 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 SRP14P37108 136 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 MTCP1P56278 107 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 BDH1Q02338 343 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 PLA2G7Q13093 441 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 TPBGQ13641 420 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 ZNF146Q15072 292 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 SPHARQ15513 63 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 DEFB112Q30KQ8 113 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 YIF1BQ5BJH7 314 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 ARMCX4Q5H9R4 360 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 DDI2Q5TDH0 399 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 LIPKQ5VXJ0 399 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 TMEM200BQ69YZ2 307 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 FAM53AQ6NSI3 398 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 UNQ9370/PRO34162Q6UXP9 181 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 PRSS48Q7RTY5 328 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 SLC36A1Q7Z2H8 476 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 NR2C2APQ86WQ0 139 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 FAM58AQ8N1B3 248 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 DYNAPQ8N1N2 210 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 KIR3DL3Q8N743 410 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 PLPPR1Q8TBJ4 325 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 TNFAIP8L1Q8WVP5 186 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 H1FXQ92522 213 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 PCGF1Q9BSM1 259 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 MND1Q9BWT6 205 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 ACOT13Q9NPJ3 140 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 RASL12Q9NYN1 266 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 ZNRD1Q9P1U0 126 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 ONECUT1Q9UBC0 465 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 NUP50Q9UKX7 468 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 SLC7A11Q9UPY5 501 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 RNF114Q9Y508 228 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 PRKDCP78527 4128 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 A0A0A6YYD4 124 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 IGHV1-69DA0A0B4J2H0 117 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 A0A1W2PRD5 423 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 A0A1W2PRF3 423 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 A0A1W2PRM7 423 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 DENRO43583 198 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 NDUFB3O43676 98 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 NDUFA2O43678 99 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 IGHV1-69P01742 117 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 ALDOBP05062 364 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 HCKP08631 526 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 RPSAP08865 295 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 UCHL1P09936 223 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 CD37P11049 281 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 NDUFB7P17568 137 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 RAB3AP20336 220 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 HNF1AP20823 631 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 TGFBR2P37173 567 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 HSPA13P48723 471 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 BMXP51813 675 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 ATP1B3P54709 279 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 TAS2R43P59537 309 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 GABARAPL2P60520 117 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 UBA52P62987 128 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 FABP5Q01469 135 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 MLLT11Q13015 90 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 EDDM3AQ14507 147 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 KCNJ8Q15842 424 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 SIGIRRQ6IA17 410 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 BTNL3Q6UXE8 466 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 C5orf24Q7Z6I8 188 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 SERPINA12Q8IW75 414 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 MKXQ8IYA7 352 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 SAXO1Q8IYX7 474 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 FAM185AQ8N0U4 392 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 SPARTQ8N0X7 666 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 OR8H2Q8N162 312 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 PRR18Q8N4B5 295 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 TMEM104Q8NE00 496 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 PXT1Q8NFP0 134 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 HAVCR2Q8TDQ0 301 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 DYRK2Q92630 601 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 LHX4Q969G2 390 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 MUL1Q969V5 352 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 FOXRED1Q96CU9 486 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 MRPL48Q96GC5 212 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 MRI1Q9BV20 369 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 TMED9Q9BVK6 235 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 C19orf24Q9BVV8 132 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 PPA2Q9H2U2 334 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 PRDM13Q9H4Q3 707 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 CNTD2Q9H8S5 307 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 UNKLQ9H9P5 680 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 KPTNQ9Y664 436 aa5.87□□□□□ -1.47
TOPBP1-207ENST00000509162 TRAV39A0A0B4J263 110 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms