RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 GLT8D1Q68CQ7 371 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 Q6P435 159 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 FIP1L1Q6UN15 594 aaKnown RBP7.1□□□□□ -1.27
SNCA-211ENST00000508895 GLIPR1L1Q6UWM5 242 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 C17orf107Q6ZR85 190 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 ZNF561Q8N587 486 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 ASCC1Q8N9N2 400 aaKnown RBP7.1□□□□□ -1.27
SNCA-211ENST00000508895 TMEM104Q8NE00 496 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 OR51T1Q8NGJ9 327 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 OR6M1Q8NGM8 313 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 OR13F1Q8NGS4 319 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 TBC1D15Q8TC07 691 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 FAM216AQ8WUB2 273 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 LHX4Q969G2 390 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 CYYR1Q96J86 154 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 DCTN5Q9BTE1 182 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 CENPOQ9BU64 300 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 SUCNR1Q9BXA5 334 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 MS4A7Q9GZW8 240 aaPredicted RBP7.1□□□□□ -1.27
SNCA-211ENST00000508895 SLITRK2Q9H156 845 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 RHOFQ9HBH0 211 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 EXOSC4Q9NPD3 245 aaKnown RBP7.1□□□□□ -1.27
SNCA-211ENST00000508895 SIRT7Q9NRC8 400 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 TNFRSF19Q9NS68 423 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 C19orf12Q9NSK7 152 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 GSTK1Q9Y2Q3 226 aa7.1□□□□□ -1.27
SNCA-211ENST00000508895 AK6Q9Y3D8 172 aaKnown RBP7.1□□□□□ -1.27
SNCA-211ENST00000508895 TRAV1-2A0A0B4J238 106 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 A0A0U1RQK1 487 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 LOC100506127A0A0U1RQW1 187 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 SMIM30A4D0T7 59 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 K7N7A8 449 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 SIRPB1O00241 398 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 SLC33A1O00400 549 aaPredicted RBP7.09□□□□□ -1.27
SNCA-211ENST00000508895 SLC17A2O00624 439 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 TOX4O94842 621 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 TK1P04183 234 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 PPIAL4GP0DN37 164 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 NDUFB7P17568 137 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 OMGP23515 440 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 PRTN3P24158 256 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 MYL9P24844 172 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 HTR2CP28335 458 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 TGFBR1P36897 503 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 ALDH3B2P48448 385 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 BMXP51813 675 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 QRFPP83859 136 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 RELBQ01201 579 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 SRSF4Q08170 494 aaKnown RBP7.09□□□□□ -1.27
SNCA-211ENST00000508895 BAMBIQ13145 260 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 UNC119Q13432 240 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 IL13RA2Q14627 380 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 PDCD1Q15116 288 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 METTL11BQ5VVY1 283 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 BTNL3Q6UXE8 466 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 SLC16A12Q6ZSM3 486 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 TCF23Q7RTU1 214 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 VMO1Q7Z5L0 202 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 OR8H2Q8N162 312 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 C11orf42Q8N5U0 333 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 OR4S1Q8NGB4 309 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 C8orf46Q8TAG6 207 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 FAM46BQ96A09 425 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 SLC25A28Q96A46 364 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 MED30Q96HR3 178 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 Q96M66 194 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 CHST6Q9GZX3 395 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 METTL9Q9H1A3 318 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 PPA2Q9H2U2 334 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 PRDM13Q9H4Q3 707 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 SEBOXQ9HB31 216 aaPredicted RBP7.09□□□□□ -1.27
SNCA-211ENST00000508895 SSR3Q9UNL2 185 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 ING4Q9UNL4 249 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 MGAM2Q2M2H8 2515 aa7.09□□□□□ -1.27
SNCA-211ENST00000508895 A0A0B4J203 849 aa7.08□□□□□ -1.28
SNCA-211ENST00000508895 TRAV24A0A0B4J272 114 aa7.08□□□□□ -1.28
SNCA-211ENST00000508895 IGHV1-69DA0A0B4J2H0 117 aa7.08□□□□□ -1.28
SNCA-211ENST00000508895 GEMIN2O14893 280 aaKnown RBP7.08□□□□□ -1.28
SNCA-211ENST00000508895 HOXA3O43365 443 aaPredicted RBP7.08□□□□□ -1.28
SNCA-211ENST00000508895 KCNAB3O43448 404 aa7.08□□□□□ -1.28
SNCA-211ENST00000508895 ZNF780AO75290 641 aaPredicted RBP7.08□□□□□ -1.28
SNCA-211ENST00000508895 BPNT1O95861 308 aa7.08□□□□□ -1.28
SNCA-211ENST00000508895 IGHV1-69P01742 117 aa7.08□□□□□ -1.28
SNCA-211ENST00000508895 TFAP2AP05549 437 aa7.08□□□□□ -1.28
SNCA-211ENST00000508895 CHRM2P08172 466 aa7.08□□□□□ -1.28
SNCA-211ENST00000508895 MELTFP08582 738 aa7.08□□□□□ -1.28
SNCA-211ENST00000508895 VSIG8P0DPA2 414 aa7.08□□□□□ -1.28
SNCA-211ENST00000508895 MGMTP16455 207 aa7.08□□□□□ -1.28
SNCA-211ENST00000508895 RAB3BP20337 219 aa7.08□□□□□ -1.28
SNCA-211ENST00000508895 FPR2P25090 351 aa7.08□□□□□ -1.28
SNCA-211ENST00000508895 LMO1P25800 156 aa7.08□□□□□ -1.28
SNCA-211ENST00000508895 COMPP49747 757 aaPredicted RBP7.08□□□□□ -1.28
SNCA-211ENST00000508895 CAPZA1P52907 286 aa7.08□□□□□ -1.28
SNCA-211ENST00000508895 CLDN12P56749 244 aa7.08□□□□□ -1.28
SNCA-211ENST00000508895 KRTAP10-3P60369 221 aa7.08□□□□□ -1.28
SNCA-211ENST00000508895 ACTG1P63261 375 aa7.08□□□□□ -1.28
SNCA-211ENST00000508895 ZNF273Q14593 569 aa7.08□□□□□ -1.28
SNCA-211ENST00000508895 ATXN7L3Q14CW9 347 aaPredicted RBP7.08□□□□□ -1.28
SNCA-211ENST00000508895 P2RY14Q15391 338 aa7.08□□□□□ -1.28
SNCA-211ENST00000508895 C11orf91Q3C1V1 193 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms