RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 SH3BGRL3Q9H299 93 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 CD207Q9UJ71 328 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 PITPNC1Q9UKF7 332 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 NXT1Q9UKK6 140 aaKnown RBP4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 B3GALT1Q9Y5Z6 326 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 TMEM56-RWDD3S4R434 201 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 CACNA1CQ13936 2221 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 FREM3P0C091 2139 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 SPTBP11277 2137 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 TRBV24-1A0A075B6N3 115 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 IGKV1D-8A0A087WSZ0 117 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 IGHV1OR21-1A0A087WYE8 117 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 A0A1B0GU03 582 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 LOC102723971A0A1B0GUV8 181 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 C17orf51A8MQB3 221 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 ZNF724A8MTY0 619 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 DVL1O14640 695 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 GEMIN2O14893 280 aaKnown RBP4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 CYB5BO43169 146 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 HIST1H2BKO60814 126 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 PIAS2O75928 621 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 YIF1AO95070 293 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 CYB5R3P00387 301 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 NRASP01111 189 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 PPYP01298 95 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 HIST1H2BJP06899 126 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 CST2P09228 141 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 FUT3P21217 361 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 FGF7P21781 194 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 VDAC1P21796 283 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 HIST1H2BOP23527 126 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 HIST1H2BBP33778 126 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 CD200P41217 278 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 RND2P52198 227 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 CLDN15P56746 228 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 HIST1H2BDP58876 126 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 TAS2R30P59541 319 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 HIST1H2BCP62807 126 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 DLX2Q07687 328 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 CHAF1BQ13112 559 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 PMS2P11Q13670 270 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 ENDOGQ14249 297 aaKnown RBP4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 HNF4GQ14541 408 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 ICAM4Q14773 271 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 ELOBQ15370 118 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 HAGHQ16775 308 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 HIST2H2BEQ16778 126 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 SP6Q3SY56 376 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 PHLDA2Q53GA4 152 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 PYY3Q5JQD4 70 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 TMEM31Q5JXX7 168 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 FAM27BQ5VT28 67 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 C1orf189Q5VU69 101 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR2T2Q6IF00 324 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 RHBDD2Q6NTF9 364 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 SLC25A24Q6NUK1 477 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 SPSB3Q6PJ21 355 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 FBXO46Q6PJ61 603 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 WDR74Q6RFH5 385 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 ZNF574Q6ZN55 896 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 LANCL3Q6ZV70 420 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 RNF144BQ7Z419 303 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 C1QL2Q7Z5L3 287 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 RTN4RL2Q86UN3 420 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 SAXO1Q8IYX7 474 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 HIST3H2BBQ8N257 126 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 TMEM252Q8N6L7 170 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 SLC35G3Q8N808 338 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 FADS6Q8N9I5 356 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 ZFP62Q8NB50 900 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 TSTD1Q8NFU3 115 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 CADM4Q8NFZ8 388 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR52M1Q8NGK5 317 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR5L1Q8NGL2 311 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR5D13Q8NGL4 314 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 AKR7LQ8NHP1 331 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 CLDND2Q8NHS1 167 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 POC1BQ8TC44 478 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 RNASEH2CQ8TDP1 164 aaKnown RBP4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 Q8WTZ3 238 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 HIST1H2BHQ93079 126 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 RAB24Q969Q5 203 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 PINX1Q96BK5 328 aaKnown RBP4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 ZNF501Q96CX3 271 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 SPACA9Q96E40 222 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 FBXO17Q96EF6 278 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 LIN37Q96GY3 246 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 REEP6Q96HR9 211 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 RCC1LQ96I51 464 aaKnown RBP4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 RAB40CQ96S21 281 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 HIST1H2BNQ99877 126 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 HIST1H2BMQ99879 126 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 PSMG3Q9BT73 122 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 FAAP24Q9BTP7 215 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 SF3B5Q9BWJ5 86 aaKnown RBP4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 PARD6GQ9BYG4 376 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 ULBP2Q9BZM5 246 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 RIMS4Q9H426 269 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms