RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 CCR6P51684 374 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 CAPZA1P52907 286 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 CAV3P56539 151 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 RAB2AP61019 212 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 ERVS71-1P61550 626 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 CCL8P80075 99 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 DGCR2P98153 550 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 DEFA6Q01524 100 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 HNF4GQ14541 408 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 ZNF124Q15973 351 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 CR1LQ2VPA4 569 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 MESTQ5EB52 335 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 ACSM5Q6NUN0 579 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 ZNF774Q6NX45 483 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 CEACAM19Q7Z692 300 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 MEX3DQ86XN8 651 aaKnown RBP6.8□□□□□ -1.32
SCN1A-207ENST00000507401 C1QL4Q86Z23 238 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 GLB1L2Q8IW92 636 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 TMEM185AQ8NFB2 350 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 ZNF671Q8TAW3 534 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 ABHD4Q8TB40 342 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 SLC25A40Q8TBP6 338 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 RNF141Q8WVD5 230 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 SPRYD4Q8WW59 207 aaPredicted RBP6.8□□□□□ -1.32
SCN1A-207ENST00000507401 ZNF649Q9BS31 505 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 PAPOLGQ9BWT3 736 aaKnown RBP6.8□□□□□ -1.32
SCN1A-207ENST00000507401 OR2J1Q9GZK6 312 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 MS4A7Q9GZW8 240 aaPredicted RBP6.8□□□□□ -1.32
SCN1A-207ENST00000507401 SLITRK2Q9H156 845 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 NIT2Q9NQR4 276 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 DECR2Q9NUI1 292 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 ZDHHC8Q9ULC8 765 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 FXYD6-FXYD2A0A087WZ82 144 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 IGHV1-69-2A0A0G2JMI3 117 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 DAPL1A0PJW8 107 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 RNF212BA8MTL3 300 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 LGALS8O00214 317 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 ARPC1BO15143 372 aaKnown RBP6.79□□□□□ -1.32
SCN1A-207ENST00000507401 PHF1O43189 567 aaPredicted RBP6.79□□□□□ -1.32
SCN1A-207ENST00000507401 PPIHO43447 177 aaKnown RBP6.79□□□□□ -1.32
SCN1A-207ENST00000507401 SLC16A7O60669 478 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 NCR1O76036 304 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 NGFP01138 241 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 MT-ND4P03905 459 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 CD55P08174 381 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 CD3GP09693 182 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 SPP1P10451 314 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 TPT1P13693 172 aaKnown RBP6.79□□□□□ -1.32
SCN1A-207ENST00000507401 CTLA4P16410 223 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 CRABP1P29762 137 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 FXYD6P3P58550 94 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 ACTBP60709 375 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 LMO4P61968 165 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 PPP1CBP62140 327 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 ACTG1P63261 375 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 BLOC1S1P78537 153 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 CYCSP99999 105 aaKnown RBP6.79□□□□□ -1.32
SCN1A-207ENST00000507401 PDZK1IP1Q13113 114 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 GLT8D1Q68CQ7 371 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 DMKNQ6E0U4 476 aaPredicted RBP6.79□□□□□ -1.32
SCN1A-207ENST00000507401 FAHD2BQ6P2I3 314 aaPredicted RBP6.79□□□□□ -1.32
SCN1A-207ENST00000507401 DNM1P34Q6PK57 102 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 ATRAIDQ6UW56 229 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 MEPCEQ7L2J0 689 aaKnown RBP6.79□□□□□ -1.32
SCN1A-207ENST00000507401 DCXRQ7Z4W1 244 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 ZNF546Q86UE3 836 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 KLBQ86Z14 1044 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 SERPINA12Q8IW75 414 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 PUSL1Q8N0Z8 303 aaKnown RBP6.79□□□□□ -1.32
SCN1A-207ENST00000507401 INO80EQ8NBZ0 244 aaPredicted RBP6.79□□□□□ -1.32
SCN1A-207ENST00000507401 NPEPL1Q8NDH3 523 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 GJC3Q8NFK1 279 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 OR52L1Q8NGH7 329 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 CLDND2Q8NHS1 167 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 TNFAIP8L1Q8WVP5 186 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 RAB1CQ92928 201 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 FAHD2AQ96GK7 314 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 ALG8Q9BVK2 526 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 FXYD6Q9H0Q3 95 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 SYT4Q9H2B2 425 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 OR51B6Q9H340 312 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 TMEM100Q9NV29 134 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 MIOXQ9UGB7 285 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 IER3IP1Q9Y5U9 82 aa6.79□□□□□ -1.32
SCN1A-207ENST00000507401 STAB1Q9NY15 2570 aa6.78□□□□□ -1.32
SCN1A-207ENST00000507401 A0A0A6YYH2 397 aa6.78□□□□□ -1.32
SCN1A-207ENST00000507401 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.78□□□□□ -1.32
SCN1A-207ENST00000507401 OR6C6A6NF89 314 aa6.78□□□□□ -1.32
SCN1A-207ENST00000507401 A6NJ64 397 aa6.78□□□□□ -1.32
SCN1A-207ENST00000507401 H7C1C5 153 aa6.78□□□□□ -1.32
SCN1A-207ENST00000507401 TMPRSS2O15393 492 aa6.78□□□□□ -1.32
SCN1A-207ENST00000507401 OGG1O15527 345 aa6.78□□□□□ -1.32
SCN1A-207ENST00000507401 TGOLN2O43493 480 aa6.78□□□□□ -1.32
SCN1A-207ENST00000507401 CDC14BO60729 498 aa6.78□□□□□ -1.32
SCN1A-207ENST00000507401 RBBP9O75884 186 aa6.78□□□□□ -1.32
SCN1A-207ENST00000507401 ABHD16AO95870 558 aa6.78□□□□□ -1.32
SCN1A-207ENST00000507401 IGHV1-46P01743 117 aa6.78□□□□□ -1.32
SCN1A-207ENST00000507401 CRYBA1P05813 215 aa6.78□□□□□ -1.32
SCN1A-207ENST00000507401 FCER2P06734 321 aa6.78□□□□□ -1.32
SCN1A-207ENST00000507401 MSMBP08118 114 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms