RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 HILPDAQ9Y5L2 63 aa11.62□□□□□ -0.55
HMGCS1-203ENST00000507004 A0A087X0M5 115 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 LOC100130705A0A1B0GUX0 176 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 A0A1B0GX30 115 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 ODAMA1E959 279 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 M0QZK8 103 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 TOR1AO14656 332 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 RAB3AP20336 220 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 MNDAP41218 407 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 IL13RA2Q14627 380 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 KISS1Q15726 138 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 CCDC58Q4VC31 144 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 PLA1AQ53H76 456 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 KRBOX4Q5JUW0 171 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 CCBE1Q6UXH8 406 aaPredicted RBP11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 REC114Q7Z4M0 266 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 LHFPL3Q86UP9 236 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 OR4P4Q8NGL7 312 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 TSEN15Q8WW01 171 aaKnown RBP11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 STMN2Q93045 179 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 JAM3Q9BX67 310 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 BARHL1Q9BZE3 327 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 WNT10AQ9GZT5 417 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 IL36RNQ9UBH0 155 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 FOXJ3Q9UPW0 622 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 MYRFQ9Y2G1 1151 aa11.61□□□□□ -0.55
HMGCS1-203ENST00000507004 IGKV1-12A0A0C4DH73 117 aa11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 ZFPL1O95159 310 aa11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 IGKV1D-12P01611 117 aa11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 CDK2P24941 298 aa11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 PAX6P26367 422 aa11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 VDAC2P45880 294 aaPredicted RBP11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 RAB13P51153 203 aa11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 SNU13P55769 128 aaKnown RBP11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 PAX5Q02548 391 aa11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 MED21Q13503 144 aa11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 ZNF691Q5VV52 312 aa11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 TMPRSS11AQ6ZMR5 421 aa11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 PQLC1Q8N2U9 271 aa11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 ZNF555Q8NEP9 628 aa11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 OR51A4Q8NGJ6 313 aa11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 OR10AC1Q8NH08 325 aa11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 GPR148Q8TDV2 347 aa11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 RFT1Q96AA3 541 aa11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 S100A14Q9HCY8 104 aa11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 C8orf4Q9NR00 106 aa11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 PAK1IP1Q9NWT1 392 aaPredicted RBP11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 AMMECR1Q9Y4X0 333 aaPredicted RBP11.6□□□□□ -0.55
HMGCS1-203ENST00000507004 NOTCH1P46531 2555 aa11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 SLC33A1O00400 549 aaPredicted RBP11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 EBAG9O00559 213 aa11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 IGLV1-47P01700 117 aa11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 DCKP27707 260 aa11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 C21orf33P30042 268 aaPredicted RBP11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 ZP1P60852 638 aa11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 SCN1BQ07699 218 aa11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 AESQ08117 197 aa11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 HLA-DRB5Q30154 266 aa11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 LDLRAD2Q5SZI1 272 aa11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 KPRPQ5T749 579 aaPredicted RBP11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 Q6P435 159 aa11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 RPL22L1Q6P5R6 122 aaKnown RBP11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 SLC16A12Q6ZSM3 486 aa11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 TMEM219Q86XT9 240 aa11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 OR10A7Q8NGE5 316 aa11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 OR5D18Q8NGL1 313 aa11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 OR9G1Q8NH87 305 aa11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 GPER1Q99527 375 aa11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 FGF20Q9NP95 211 aaPredicted RBP11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 FAM118AQ9NWS6 357 aa11.59□□□□□ -0.55
HMGCS1-203ENST00000507004 KBTBD11-OT1A0A1B0GTJ5 212 aa11.58□□□□□ -0.56
HMGCS1-203ENST00000507004 MEX3AA1L020 520 aaKnown RBP11.58□□□□□ -0.56
HMGCS1-203ENST00000507004 OR2F2O95006 317 aa11.58□□□□□ -0.56
HMGCS1-203ENST00000507004 GLIPR1P48060 266 aa11.58□□□□□ -0.56
HMGCS1-203ENST00000507004 PPP3R1P63098 170 aa11.58□□□□□ -0.56
HMGCS1-203ENST00000507004 SAMD5Q5TGI4 173 aa11.58□□□□□ -0.56
HMGCS1-203ENST00000507004 PRAMEF5Q5TYX0 476 aa11.58□□□□□ -0.56
HMGCS1-203ENST00000507004 ZNF529Q6P280 563 aa11.58□□□□□ -0.56
HMGCS1-203ENST00000507004 C11orf44Q8N8P7 122 aa11.58□□□□□ -0.56
HMGCS1-203ENST00000507004 Q8NFD4 153 aa11.58□□□□□ -0.56
HMGCS1-203ENST00000507004 OR51T1Q8NGJ9 327 aa11.58□□□□□ -0.56
HMGCS1-203ENST00000507004 OR52I1Q8NGK6 324 aa11.58□□□□□ -0.56
HMGCS1-203ENST00000507004 WIPF2Q8TF74 440 aaPredicted RBP11.58□□□□□ -0.56
HMGCS1-203ENST00000507004 SPACA5Q96QH8 159 aa11.58□□□□□ -0.56
HMGCS1-203ENST00000507004 ZNF649Q9BS31 505 aa11.58□□□□□ -0.56
HMGCS1-203ENST00000507004 ISG20L2Q9H9L3 353 aaKnown RBP11.58□□□□□ -0.56
HMGCS1-203ENST00000507004 KIAA2026Q5HYC2 2103 aa11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 H0YJX3 145 aa11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 BUB1B-PAK6H3BSN5 160 aa11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 ZNF780AO75290 641 aaPredicted RBP11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 FAM106CPP0CH98 169 aa11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 CALCBP10092 127 aa11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 CDK5R1Q15078 307 aa11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 RSU1Q15404 277 aa11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 ZSCAN26Q16670 478 aa11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 BEAN1Q3B7T3 259 aa11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 PAN3Q58A45 887 aaKnown RBP11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 TPTE2P1Q5T6R2 138 aa11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 LINC00596Q86U02 117 aa11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 THNSL2Q86YJ6 484 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms