RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 ZNF780AO75290 641 aaPredicted RBP14.91□□□□□ -0.02
NPHP4-210ENST00000506941 IFNA2P01563 188 aa14.91□□□□□ -0.02
NPHP4-210ENST00000506941 DLX6P56179 175 aa14.91□□□□□ -0.02
NPHP4-210ENST00000506941 RUSC1-AS1Q66K80 236 aa14.91□□□□□ -0.02
NPHP4-210ENST00000506941 GLT8D1Q68CQ7 371 aa14.91□□□□□ -0.02
NPHP4-210ENST00000506941 METAP1DQ6UB28 335 aaPredicted RBP14.91□□□□□ -0.02
NPHP4-210ENST00000506941 BRD3OSQ6XYD6 125 aa14.91□□□□□ -0.02
NPHP4-210ENST00000506941 C11orf42Q8N5U0 333 aa14.91□□□□□ -0.02
NPHP4-210ENST00000506941 LHX4Q969G2 390 aa14.91□□□□□ -0.02
NPHP4-210ENST00000506941 FOXRED1Q96CU9 486 aaPredicted RBP14.91□□□□□ -0.02
NPHP4-210ENST00000506941 KCNK15Q9H427 330 aa14.91□□□□□ -0.02
NPHP4-210ENST00000506941 BANF2Q9H503 90 aa14.91□□□□□ -0.02
NPHP4-210ENST00000506941 AK6Q9Y3D8 172 aaKnown RBP14.91□□□□□ -0.02
NPHP4-210ENST00000506941 A0A087WXM4 84 aa14.9□□□□□ -0.02
NPHP4-210ENST00000506941 HSPB6O14558 160 aa14.9□□□□□ -0.02
NPHP4-210ENST00000506941 SLC22A1O15245 554 aa14.9□□□□□ -0.02
NPHP4-210ENST00000506941 GTF2F2P13984 249 aa14.9□□□□□ -0.02
NPHP4-210ENST00000506941 GALP22466 123 aa14.9□□□□□ -0.02
NPHP4-210ENST00000506941 ERVFRD-1P60508 538 aa14.9□□□□□ -0.02
NPHP4-210ENST00000506941 SRSF2Q01130 221 aaKnown RBP14.9□□□□□ -0.02
NPHP4-210ENST00000506941 KLRD1Q13241 179 aa14.9□□□□□ -0.02
NPHP4-210ENST00000506941 GPR176Q14439 515 aa14.9□□□□□ -0.02
NPHP4-210ENST00000506941 ATXN7L3Q14CW9 347 aaPredicted RBP14.9□□□□□ -0.02
NPHP4-210ENST00000506941 GPR157Q5UAW9 335 aa14.9□□□□□ -0.02
NPHP4-210ENST00000506941 C22orf42Q6IC83 251 aa14.9□□□□□ -0.02
NPHP4-210ENST00000506941 C1orf122Q6ZSJ8 110 aa14.9□□□□□ -0.02
NPHP4-210ENST00000506941 PDZD9Q8IXQ8 264 aa14.9□□□□□ -0.02
NPHP4-210ENST00000506941 PPP1R35Q8TAP8 253 aa14.9□□□□□ -0.02
NPHP4-210ENST00000506941 TNFRSF14Q92956 283 aa14.9□□□□□ -0.02
NPHP4-210ENST00000506941 SLC25A28Q96A46 364 aa14.9□□□□□ -0.02
NPHP4-210ENST00000506941 COQ2Q96H96 371 aa14.9□□□□□ -0.02
NPHP4-210ENST00000506941 OCEL1Q9H607 264 aa14.9□□□□□ -0.02
NPHP4-210ENST00000506941 IFT22Q9H7X7 185 aa14.9□□□□□ -0.02
NPHP4-210ENST00000506941 UNKLQ9H9P5 680 aaKnown RBP14.9□□□□□ -0.02
NPHP4-210ENST00000506941 TRIM64CA6NLI5 447 aa14.89□□□□□ -0.03
NPHP4-210ENST00000506941 RNASEK-C17orf49H0YIS7 233 aa14.89□□□□□ -0.03
NPHP4-210ENST00000506941 CRTAPO75718 401 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-210ENST00000506941 CSN2P05814 226 aa14.89□□□□□ -0.03
NPHP4-210ENST00000506941 MGMTP16455 207 aa14.89□□□□□ -0.03
NPHP4-210ENST00000506941 HTR2CP28335 458 aa14.89□□□□□ -0.03
NPHP4-210ENST00000506941 ERP29P30040 261 aaKnown RBP14.89□□□□□ -0.03
NPHP4-210ENST00000506941 GLIPR1P48060 266 aa14.89□□□□□ -0.03
NPHP4-210ENST00000506941 P2RX3P56373 397 aa14.89□□□□□ -0.03
NPHP4-210ENST00000506941 MEF2CQ06413 473 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-210ENST00000506941 AESQ08117 197 aa14.89□□□□□ -0.03
NPHP4-210ENST00000506941 SCGB2A2Q13296 93 aa14.89□□□□□ -0.03
NPHP4-210ENST00000506941 TAF9Q16594 264 aa14.89□□□□□ -0.03
NPHP4-210ENST00000506941 PAN3Q58A45 887 aaKnown RBP14.89□□□□□ -0.03
NPHP4-210ENST00000506941 C9orf139Q6ZV77 190 aa14.89□□□□□ -0.03
NPHP4-210ENST00000506941 LINC00596Q86U02 117 aa14.89□□□□□ -0.03
NPHP4-210ENST00000506941 BPIFB2Q8N4F0 458 aa14.89□□□□□ -0.03
NPHP4-210ENST00000506941 FAM46BQ96A09 425 aa14.89□□□□□ -0.03
NPHP4-210ENST00000506941 ZNF48Q96MX3 618 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-210ENST00000506941 OR51E2Q9H255 320 aa14.89□□□□□ -0.03
NPHP4-210ENST00000506941 METTL8Q9H825 291 aaKnown RBP14.89□□□□□ -0.03
NPHP4-210ENST00000506941 PCDHB16Q9NRJ7 776 aa14.89□□□□□ -0.03
NPHP4-210ENST00000506941 STUB1Q9UNE7 303 aa14.89□□□□□ -0.03
NPHP4-210ENST00000506941 TRAV1-2A0A0B4J238 106 aa14.88□□□□□ -0.03
NPHP4-210ENST00000506941 IGHV1-69DA0A0B4J2H0 117 aa14.88□□□□□ -0.03
NPHP4-210ENST00000506941 SLC17A2O00624 439 aa14.88□□□□□ -0.03
NPHP4-210ENST00000506941 OR7C1O76099 320 aaPredicted RBP14.88□□□□□ -0.03
NPHP4-210ENST00000506941 IGHV1-69P01742 117 aa14.88□□□□□ -0.03
NPHP4-210ENST00000506941 VSIG8P0DPA2 414 aa14.88□□□□□ -0.03
NPHP4-210ENST00000506941 PRTN3P24158 256 aa14.88□□□□□ -0.03
NPHP4-210ENST00000506941 FGF9P31371 208 aaPredicted RBP14.88□□□□□ -0.03
NPHP4-210ENST00000506941 MPV17LQ2QL34 196 aa14.88□□□□□ -0.03
NPHP4-210ENST00000506941 OR10K2Q6IF99 312 aa14.88□□□□□ -0.03
NPHP4-210ENST00000506941 HCP5Q6MZN7 132 aa14.88□□□□□ -0.03
NPHP4-210ENST00000506941 SUMF2Q8NBJ7 301 aa14.88□□□□□ -0.03
NPHP4-210ENST00000506941 OR6M1Q8NGM8 313 aa14.88□□□□□ -0.03
NPHP4-210ENST00000506941 PLPPR1Q8TBJ4 325 aa14.88□□□□□ -0.03
NPHP4-210ENST00000506941 MRPS24Q96EL2 167 aaKnown RBP14.88□□□□□ -0.03
NPHP4-210ENST00000506941 CYYR1Q96J86 154 aa14.88□□□□□ -0.03
NPHP4-210ENST00000506941 Q96M66 194 aa14.88□□□□□ -0.03
NPHP4-210ENST00000506941 SELENOIQ9C0D9 397 aa14.88□□□□□ -0.03
NPHP4-210ENST00000506941 MS4A7Q9GZW8 240 aaPredicted RBP14.88□□□□□ -0.03
NPHP4-210ENST00000506941 TXNL4BQ9NX01 149 aaKnown RBP14.88□□□□□ -0.03
NPHP4-210ENST00000506941 ING3Q9NXR8 418 aa14.88□□□□□ -0.03
NPHP4-210ENST00000506941 GHRLQ9UBU3 117 aa14.88□□□□□ -0.03
NPHP4-210ENST00000506941 LINC00312Q9Y6C7 94 aa14.88□□□□□ -0.03
NPHP4-210ENST00000506941 A0A1W2PPH5 198 aa14.87□□□□□ -0.03
NPHP4-210ENST00000506941 hADV38S2A0JD32 116 aa14.87□□□□□ -0.03
NPHP4-210ENST00000506941 C17orf98A8MV24 154 aa14.87□□□□□ -0.03
NPHP4-210ENST00000506941 UBBP0CG47 229 aa14.87□□□□□ -0.03
NPHP4-210ENST00000506941 ZNF728P0DKX0 622 aa14.87□□□□□ -0.03
NPHP4-210ENST00000506941 GADD45AP24522 165 aa14.87□□□□□ -0.03
NPHP4-210ENST00000506941 FPR2P25090 351 aa14.87□□□□□ -0.03
NPHP4-210ENST00000506941 OR10A3P58181 314 aa14.87□□□□□ -0.03
NPHP4-210ENST00000506941 QRFPP83859 136 aa14.87□□□□□ -0.03
NPHP4-210ENST00000506941 UNC119Q13432 240 aa14.87□□□□□ -0.03
NPHP4-210ENST00000506941 BLMHQ13867 455 aa14.87□□□□□ -0.03
NPHP4-210ENST00000506941 P2RY14Q15391 338 aa14.87□□□□□ -0.03
NPHP4-210ENST00000506941 KRTAP21-3Q3LHN1 58 aa14.87□□□□□ -0.03
NPHP4-210ENST00000506941 KRBOX4Q5JUW0 171 aa14.87□□□□□ -0.03
NPHP4-210ENST00000506941 NR2C2APQ86WQ0 139 aa14.87□□□□□ -0.03
NPHP4-210ENST00000506941 DPCDQ9BVM2 203 aaPredicted RBP14.87□□□□□ -0.03
NPHP4-210ENST00000506941 PLGRKTQ9HBL7 147 aa14.87□□□□□ -0.03
NPHP4-210ENST00000506941 MDFIC2A0A1B0GVS7 189 aa14.86□□□□□ -0.03
NPHP4-210ENST00000506941 ODAMA1E959 279 aa14.86□□□□□ -0.03
NPHP4-210ENST00000506941 BPNT1O95861 308 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms