RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 PIGLQ9Y2B2 252 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 F5P12259 2224 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 SHISA8B8ZZ34 492 aa14.82□□□□□ -0.04
SQSTM1-211ENST00000506690 SRPXP78539 464 aa14.82□□□□□ -0.04
SQSTM1-211ENST00000506690 BAXQ07812 192 aa14.82□□□□□ -0.04
SQSTM1-211ENST00000506690 MYBPHQ13203 477 aa14.82□□□□□ -0.04
SQSTM1-211ENST00000506690 RAB30Q15771 203 aa14.82□□□□□ -0.04
SQSTM1-211ENST00000506690 HIST3H3Q16695 136 aa14.82□□□□□ -0.04
SQSTM1-211ENST00000506690 CARD17Q5XLA6 110 aa14.82□□□□□ -0.04
SQSTM1-211ENST00000506690 SRD5A3Q9H8P0 318 aa14.82□□□□□ -0.04
SQSTM1-211ENST00000506690 C3orf85A0A1B0GTC6 90 aa14.82□□□□□ -0.04
SQSTM1-211ENST00000506690 FAM221AA4D161 298 aa14.82□□□□□ -0.04
SQSTM1-211ENST00000506690 CST7O76096 145 aa14.82□□□□□ -0.04
SQSTM1-211ENST00000506690 SUMO3P55854 103 aaPredicted RBP14.82□□□□□ -0.04
SQSTM1-211ENST00000506690 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.82□□□□□ -0.04
SQSTM1-211ENST00000506690 ZNF880Q6PDB4 577 aa14.82□□□□□ -0.04
SQSTM1-211ENST00000506690 CTDSP1Q9GZU7 261 aa14.82□□□□□ -0.04
SQSTM1-211ENST00000506690 TMEM222Q9H0R3 208 aa14.82□□□□□ -0.04
SQSTM1-211ENST00000506690 CEP290O15078 2479 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 SPTY2D1-AS1A0A0U1RR47 76 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 ETV2O00321 342 aaPredicted RBP14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 MPPED1O15442 326 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 MDKP21741 143 aaPredicted RBP14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 TAS2R30P59541 319 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 COL10A1Q03692 680 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 ADPRHL1Q8NDY3 354 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 DYRK2Q92630 601 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 C10orf35Q96D05 121 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 ZNF160Q9HCG1 818 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 GNG13Q9P2W3 67 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 PTRH2Q9Y3E5 179 aaKnown RBP14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 SHISA7A6NL88 538 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 DFFBO76075 338 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 TMEM50AO95807 157 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 SFTPCP11686 197 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 GFERP55789 205 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 VAMP2P63027 116 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 CXorf66Q5JRM2 361 aaPredicted RBP14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 H1FOOQ8IZA3 346 aaPredicted RBP14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 TMEM123Q8N131 208 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 NAXEQ8NCW5 288 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 TMEM56Q96MV1 263 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 SPIN2AQ99865 258 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 SPIN2BQ9BPZ2 258 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 MAGT1Q9H0U3 335 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 METTL9Q9H1A3 318 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 TMEM56-RWDD3S4R434 201 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 EXPH5Q8NEV8 1989 aa14.81□□□□□ -0.04
SQSTM1-211ENST00000506690 H3BMH7 237 aa14.8□□□□□ -0.04
SQSTM1-211ENST00000506690 BCL2P10415 239 aa14.8□□□□□ -0.04
SQSTM1-211ENST00000506690 RNF4P78317 190 aa14.8□□□□□ -0.04
SQSTM1-211ENST00000506690 C16orf47Q6ZP98 133 aaPredicted RBP14.8□□□□□ -0.04
SQSTM1-211ENST00000506690 LANCL3Q6ZV70 420 aa14.8□□□□□ -0.04
SQSTM1-211ENST00000506690 SLC25A26Q70HW3 274 aa14.8□□□□□ -0.04
SQSTM1-211ENST00000506690 TMEM217Q8N7C4 229 aa14.8□□□□□ -0.04
SQSTM1-211ENST00000506690 PYGO2Q9BRQ0 406 aa14.8□□□□□ -0.04
SQSTM1-211ENST00000506690 SZT2Q5T011 3432 aa14.8□□□□□ -0.04
SQSTM1-211ENST00000506690 ANGPTL7O43827 346 aa14.8□□□□□ -0.04
SQSTM1-211ENST00000506690 MMP9P14780 707 aa14.8□□□□□ -0.04
SQSTM1-211ENST00000506690 AADACP22760 399 aa14.8□□□□□ -0.04
SQSTM1-211ENST00000506690 MTCP1P56278 107 aa14.8□□□□□ -0.04
SQSTM1-211ENST00000506690 FBXW4P57775 412 aa14.8□□□□□ -0.04
SQSTM1-211ENST00000506690 MAML2Q8IZL2 1156 aaPredicted RBP14.8□□□□□ -0.04
SQSTM1-211ENST00000506690 CA5BP1Q8WTZ4 195 aa14.8□□□□□ -0.04
SQSTM1-211ENST00000506690 ATP5SQ99766 215 aa14.8□□□□□ -0.04
SQSTM1-211ENST00000506690 ATG101Q9BSB4 218 aa14.8□□□□□ -0.04
SQSTM1-211ENST00000506690 ZNF705GA8MUZ8 300 aaPredicted RBP14.79□□□□□ -0.04
SQSTM1-211ENST00000506690 F5H5K5 113 aa14.79□□□□□ -0.04
SQSTM1-211ENST00000506690 TK1P04183 234 aa14.79□□□□□ -0.04
SQSTM1-211ENST00000506690 PDLIM4P50479 330 aa14.79□□□□□ -0.04
SQSTM1-211ENST00000506690 ID3Q02535 119 aa14.79□□□□□ -0.04
SQSTM1-211ENST00000506690 RAB35Q15286 201 aa14.79□□□□□ -0.04
SQSTM1-211ENST00000506690 IL22RA1Q8N6P7 574 aa14.79□□□□□ -0.04
SQSTM1-211ENST00000506690 ADGRG7Q96K78 797 aa14.79□□□□□ -0.04
SQSTM1-211ENST00000506690 SIGLEC12Q96PQ1 595 aa14.79□□□□□ -0.04
SQSTM1-211ENST00000506690 HIST1H2AAQ96QV6 131 aa14.79□□□□□ -0.04
SQSTM1-211ENST00000506690 ZNF286AQ9HBT8 521 aa14.79□□□□□ -0.04
SQSTM1-211ENST00000506690 VAX2Q9UIW0 290 aa14.79□□□□□ -0.04
SQSTM1-211ENST00000506690 RTTNQ86VV8 2226 aa14.79□□□□□ -0.04
SQSTM1-211ENST00000506690 PCDH15Q96QU1 1955 aa14.79□□□□□ -0.04
SQSTM1-211ENST00000506690 CLEC18AA5D8T8 446 aa14.78□□□□□ -0.04
SQSTM1-211ENST00000506690 HERV-K104P61576 105 aa14.78□□□□□ -0.04
SQSTM1-211ENST00000506690 DLX2Q07687 328 aaPredicted RBP14.78□□□□□ -0.04
SQSTM1-211ENST00000506690 EXT1Q16394 746 aa14.78□□□□□ -0.04
SQSTM1-211ENST00000506690 RSPO1Q2MKA7 263 aaPredicted RBP14.78□□□□□ -0.04
SQSTM1-211ENST00000506690 MPV17LQ2QL34 196 aa14.78□□□□□ -0.04
SQSTM1-211ENST00000506690 C20orf196Q8IYI0 205 aa14.78□□□□□ -0.04
SQSTM1-211ENST00000506690 PRSS58Q8IYP2 241 aa14.78□□□□□ -0.04
SQSTM1-211ENST00000506690 CLEC18CQ8NCF0 446 aa14.78□□□□□ -0.04
SQSTM1-211ENST00000506690 SNHG12Q9BXW3 62 aa14.78□□□□□ -0.04
SQSTM1-211ENST00000506690 TPSD1Q9BZJ3 242 aa14.78□□□□□ -0.04
SQSTM1-211ENST00000506690 ZNF814B7Z6K7 855 aa14.78□□□□□ -0.04
SQSTM1-211ENST00000506690 SPRY1O43609 319 aaPredicted RBP14.78□□□□□ -0.04
SQSTM1-211ENST00000506690 PFN1P07737 140 aaKnown RBP14.78□□□□□ -0.04
SQSTM1-211ENST00000506690 ZNF154Q13106 437 aa14.78□□□□□ -0.04
SQSTM1-211ENST00000506690 HNF4GQ14541 408 aa14.78□□□□□ -0.04
SQSTM1-211ENST00000506690 SELENOHQ8IZQ5 122 aaKnown RBP14.78□□□□□ -0.04
SQSTM1-211ENST00000506690 FAM185AQ8N0U4 392 aa14.78□□□□□ -0.04
SQSTM1-211ENST00000506690 P2RX4Q99571 388 aa14.78□□□□□ -0.04
SQSTM1-211ENST00000506690 CHRNA10Q9GZZ6 450 aa14.78□□□□□ -0.04
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