RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 STHQ8IWL8 128 aa4.96□□□□□ -1.61
SCLT1-207ENST00000506233 UEVLDQ8IX04 471 aa4.96□□□□□ -1.61
SCLT1-207ENST00000506233 TMEM229BQ8NBD8 167 aa4.96□□□□□ -1.61
SCLT1-207ENST00000506233 LILRB4Q8NHJ6 448 aa4.96□□□□□ -1.61
SCLT1-207ENST00000506233 ALX4Q9H161 411 aaPredicted RBP4.96□□□□□ -1.61
SCLT1-207ENST00000506233 OPN4Q9UHM6 478 aa4.96□□□□□ -1.61
SCLT1-207ENST00000506233 ZNF724A8MTY0 619 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 SULT2B1O00204 365 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 PFDN1O60925 122 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 TNFSF15O95150 251 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 CCL2P13500 99 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 ZNF35P13682 527 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 ZNF32P17041 273 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 CDSNQ15517 529 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 GABRG1Q8N1C3 465 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 RBMXL3Q8N7X1 1067 aaKnown RBP4.96□□□□□ -1.62
SCLT1-207ENST00000506233 OR51S1Q8NGJ8 323 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 OR2V1Q8NHB1 315 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 CHMP1AQ9HD42 196 aaPredicted RBP4.96□□□□□ -1.62
SCLT1-207ENST00000506233 NUBP2Q9Y5Y2 271 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 TMEM14AQ9Y6G1 99 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 PDZD2O15018 2839 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 OR5H14A6NHG9 310 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 DHRS3O75911 302 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 HPGDP15428 266 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 IGHV1-2P23083 117 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 CCKARP32238 428 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 EIF2B2P49770 351 aaKnown RBP4.96□□□□□ -1.62
SCLT1-207ENST00000506233 RIDAP52758 137 aaKnown RBP4.96□□□□□ -1.62
SCLT1-207ENST00000506233 SRSF3P84103 164 aaKnown RBP4.96□□□□□ -1.62
SCLT1-207ENST00000506233 TMEM41BQ5BJD5 291 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 FNDC9Q8TBE3 224 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 CITED1Q99966 193 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 HES4Q9HCC6 221 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 MTCH1Q9NZJ7 389 aa4.96□□□□□ -1.62
SCLT1-207ENST00000506233 TRBV6-7A0A0A0MS04 114 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 ARGFXA6NJG6 315 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.95□□□□□ -1.62
SCLT1-207ENST00000506233 NUDT14O95848 222 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 IL5P05113 134 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 MSR1P21757 451 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 PRDX2P32119 198 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 KISS1Q15726 138 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 ZNF544Q6NX49 715 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 TFAP2EQ6VUC0 442 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 FJX1Q86VR8 437 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 RAB43Q86YS6 212 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 LHFPL5Q8TAF8 219 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 NUDCD2Q8WVJ2 157 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 PNPLA2Q96AD5 504 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 ARHGAP5-AS1Q96IT6 56 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 MXRA5Q9NR99 2828 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 PAQR5Q9NXK6 330 aaPredicted RBP4.95□□□□□ -1.62
SCLT1-207ENST00000506233 CISD1Q9NZ45 108 aaKnown RBP4.95□□□□□ -1.62
SCLT1-207ENST00000506233 IL36GQ9NZH8 169 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 ONECUT1Q9UBC0 465 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 C19orf25Q9UFG5 118 aaPredicted RBP4.95□□□□□ -1.62
SCLT1-207ENST00000506233 LEUTXA8MZ59 168 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 NPIPA5E9PKD4 350 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 RRHO14718 337 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 IGLV1-44P01699 117 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 CSN3P07498 182 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 TACSTD2P09758 323 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 SPINK2P20155 84 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 FKBP2P26885 142 aaKnown RBP4.95□□□□□ -1.62
SCLT1-207ENST00000506233 PTGER4P35408 488 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 PTGFRP43088 359 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 DUSP3P51452 185 aaPredicted RBP4.95□□□□□ -1.62
SCLT1-207ENST00000506233 ART1P52961 327 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 ERVS71-1P61550 626 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 SUMO2P61956 95 aaKnown RBP4.95□□□□□ -1.62
SCLT1-207ENST00000506233 ANKRD55Q3KP44 614 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 IGFL3Q6UXB1 125 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 Q6ZWC4 215 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 DEFB124Q8NES8 71 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 OR6M1Q8NGM8 313 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 OR13C3Q8NGS6 347 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 SULT4A1Q9BR01 284 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 FXYD6Q9H0Q3 95 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 DPAGT1Q9H3H5 408 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 STMN3Q9NZ72 180 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 NPIPA1Q9UND3 350 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 CSMD3Q7Z407 3707 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 HELTA6NFD8 242 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 INMT-MINDY4F8WBC2 141 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 CCNKO75909 580 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 NAPSAO96009 420 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 PSMB1P20618 241 aaKnown RBP4.95□□□□□ -1.62
SCLT1-207ENST00000506233 CHATP28329 748 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 PIGYQ3MUY2 71 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 C11orf87Q6NUJ2 197 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 Q6P435 159 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 SLC25A42Q86VD7 318 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 FAM173AQ9BQD7 235 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 ZNF436Q9C0F3 470 aaPredicted RBP4.95□□□□□ -1.62
SCLT1-207ENST00000506233 CST11Q9H112 138 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 TLNRD1Q9H1K6 362 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 OR51J1Q9H342 316 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 TMEM231Q9H6L2 316 aa4.95□□□□□ -1.62
SCLT1-207ENST00000506233 TPSG1Q9NRR2 321 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms