RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 SSR3Q9UNL2 185 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 TET2Q6N021 2002 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-222ENST00000506018 hADV38S2A0JD32 116 aa8.49□□□□□ -1.05
NR1I3-222ENST00000506018 CCDC160A6NGH7 325 aa8.49□□□□□ -1.05
NR1I3-222ENST00000506018 RBP4P02753 201 aa8.49□□□□□ -1.05
NR1I3-222ENST00000506018 GTF2A1P52655 376 aaPredicted RBP8.49□□□□□ -1.05
NR1I3-222ENST00000506018 TMBIM6P55061 237 aa8.49□□□□□ -1.05
NR1I3-222ENST00000506018 MTCP1P56278 107 aa8.49□□□□□ -1.05
NR1I3-222ENST00000506018 UTS2BQ765I0 119 aa8.49□□□□□ -1.05
NR1I3-222ENST00000506018 OR8H2Q8N162 312 aa8.49□□□□□ -1.05
NR1I3-222ENST00000506018 BATF2Q8N1L9 274 aa8.49□□□□□ -1.05
NR1I3-222ENST00000506018 PRSS35Q8N3Z0 413 aa8.49□□□□□ -1.05
NR1I3-222ENST00000506018 PNKDQ8N490 385 aa8.49□□□□□ -1.05
NR1I3-222ENST00000506018 OR4C13Q8NGP0 309 aa8.49□□□□□ -1.05
NR1I3-222ENST00000506018 GPR148Q8TDV2 347 aa8.49□□□□□ -1.05
NR1I3-222ENST00000506018 RAB2BQ8WUD1 216 aa8.49□□□□□ -1.05
NR1I3-222ENST00000506018 SPSB1Q96BD6 273 aa8.49□□□□□ -1.05
NR1I3-222ENST00000506018 FOXRED1Q96CU9 486 aaPredicted RBP8.49□□□□□ -1.05
NR1I3-222ENST00000506018 SNX22Q96L94 193 aa8.49□□□□□ -1.05
NR1I3-222ENST00000506018 FAM192AQ9GZU8 254 aa8.49□□□□□ -1.05
NR1I3-222ENST00000506018 MEGF9Q9H1U4 602 aa8.49□□□□□ -1.05
NR1I3-222ENST00000506018 MMP27Q9H306 513 aa8.49□□□□□ -1.05
NR1I3-222ENST00000506018 ABCB10Q9NRK6 738 aa8.49□□□□□ -1.05
NR1I3-222ENST00000506018 FRRS1LQ9P0K9 344 aa8.49□□□□□ -1.05
NR1I3-222ENST00000506018 STUB1Q9UNE7 303 aa8.49□□□□□ -1.05
NR1I3-222ENST00000506018 TBL2Q9Y4P3 447 aaKnown RBP8.49□□□□□ -1.05
NR1I3-222ENST00000506018 PNMA8CA0A1B0GUJ8 204 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 FUOMA2VDF0 154 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 OR4C45A6NMZ5 311 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 C17orf98A8MV24 154 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 E9PI62 339 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 ZNF701M0R085 212 aaPredicted RBP8.48□□□□□ -1.05
NR1I3-222ENST00000506018 AIREO43918 545 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 ARL6IP5O75915 188 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 ZFPL1O95159 310 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 HAND1O96004 215 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 LALBAP00709 142 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 ZNF728P0DKX0 622 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 CCL3L1P16619 93 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 ATF1P18846 271 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 COX7A1P24310 79 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 AZGP1P25311 298 aaKnown RBP8.48□□□□□ -1.05
NR1I3-222ENST00000506018 POU3F4P49335 361 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 PROK1P58294 105 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 NANOS3P60323 173 aaKnown RBP8.48□□□□□ -1.05
NR1I3-222ENST00000506018 MEF2CQ06413 473 aaPredicted RBP8.48□□□□□ -1.05
NR1I3-222ENST00000506018 ZNF273Q14593 569 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 C2orf68Q2NKX9 166 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 SPIN3Q5JUX0 258 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 SATL1Q86VE3 508 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 ANKRD13BQ86YJ7 626 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 CLVS1Q8IUQ0 354 aaPredicted RBP8.48□□□□□ -1.05
NR1I3-222ENST00000506018 FAM58AQ8N1B3 248 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 ZFP41Q8N8Y5 198 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 OR13C3Q8NGS6 347 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 OR2T6Q8NHC8 308 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 RPS4Y2Q8TD47 263 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 YIPF6Q96EC8 236 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 CPNE2Q96FN4 548 aaPredicted RBP8.48□□□□□ -1.05
NR1I3-222ENST00000506018 ZNF714Q96N38 554 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 TMED9Q9BVK6 235 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 FUNDC2Q9BWH2 189 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 NPFFR1Q9GZQ6 430 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 RANBP3Q9H6Z4 567 aaPredicted RBP8.48□□□□□ -1.05
NR1I3-222ENST00000506018 SEBOXQ9HB31 216 aaPredicted RBP8.48□□□□□ -1.05
NR1I3-222ENST00000506018 RHOFQ9HBH0 211 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 EXOSC4Q9NPD3 245 aaKnown RBP8.48□□□□□ -1.05
NR1I3-222ENST00000506018 MTCH1Q9NZJ7 389 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 FBLN5Q9UBX5 448 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 PITPNC1Q9UKF7 332 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 PKD1L1Q8TDX9 2849 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 WNK1Q9H4A3 2382 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 TRDV1A0A1B0GX56 115 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 ARG1P05089 322 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 GABRR1P24046 479 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 RANBP1P43487 201 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 KIR3DL2P43630 455 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 SRSF4Q08170 494 aaKnown RBP8.48□□□□□ -1.05
NR1I3-222ENST00000506018 EDDM3AQ14507 147 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 GRK1Q15835 563 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 LY6EQ16553 131 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 Q499Y3 187 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 GPR107Q5VW38 600 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 HCP5Q6MZN7 132 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 ZNF782Q6ZMW2 699 aaPredicted RBP8.48□□□□□ -1.05
NR1I3-222ENST00000506018 Q6ZTK2 550 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 TRAPPC6BQ86SZ2 158 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 RDH10Q8IZV5 341 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 TSEN15Q8WW01 171 aaKnown RBP8.48□□□□□ -1.05
NR1I3-222ENST00000506018 FGGYQ96C11 551 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 DGCR14Q96DF8 476 aaKnown RBP8.48□□□□□ -1.05
NR1I3-222ENST00000506018 MALSU1Q96EH3 234 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 PGLYRP3Q96LB9 341 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 PDCD1LG2Q9BQ51 273 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 CKLFQ9UBR5 152 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 DHDHQ9UQ10 334 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 LINC00312Q9Y6C7 94 aa8.48□□□□□ -1.05
NR1I3-222ENST00000506018 KIAA2026Q5HYC2 2103 aa8.47□□□□□ -1.05
NR1I3-222ENST00000506018 TRRAPQ9Y4A5 3859 aa8.47□□□□□ -1.05
NR1I3-222ENST00000506018 IGKV1-27A0A075B6S5 117 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms