RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 MYO1DO94832 1006 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 GABRA1P14867 456 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 CTLA4P16410 223 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 PRTN3P24158 256 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 CNTFRP26992 372 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 S100A2P29034 98 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 LGALS7P47929 136 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 ZNF83P51522 516 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 ACTL10Q5JWF8 245 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 RESP18Q5W5W9 173 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 DRAXINQ8NBI3 349 aaPredicted RBP1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 MITD1Q8WV92 249 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 OLFM3Q96PB7 478 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 LINC01587Q99440 93 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 COPS4Q9BT78 406 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 DIABLOQ9NR28 239 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 STMN3Q9NZ72 180 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 DNAJC27Q9NZQ0 273 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 NAGKQ9UJ70 344 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 BZW2Q9Y6E2 419 aaKnown RBP1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 U3KQK5 164 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 DOCK6Q96HP0 2047 aa1.62□□□□□ -2.15
TOPBP1-204ENST00000505804 GSTTP1A0A1W2PQM5 241 aa1.62□□□□□ -2.15
TOPBP1-204ENST00000505804 H3BP45 60 aa1.62□□□□□ -2.15
TOPBP1-204ENST00000505804 IGKV5-2P06315 115 aa1.62□□□□□ -2.15
TOPBP1-204ENST00000505804 CECR9P0C854 216 aa1.62□□□□□ -2.15
TOPBP1-204ENST00000505804 CASP8Q14790 479 aa1.62□□□□□ -2.15
TOPBP1-204ENST00000505804 BCL2A1Q16548 175 aa1.62□□□□□ -2.15
TOPBP1-204ENST00000505804 FAHD1Q6P587 224 aa1.62□□□□□ -2.15
TOPBP1-204ENST00000505804 TCF24Q7RTU0 167 aa1.62□□□□□ -2.15
TOPBP1-204ENST00000505804 FAM58AQ8N1B3 248 aa1.62□□□□□ -2.15
TOPBP1-204ENST00000505804 SYS1Q8N2H4 156 aa1.62□□□□□ -2.15
TOPBP1-204ENST00000505804 ZNF738Q8NE65 137 aa1.62□□□□□ -2.15
TOPBP1-204ENST00000505804 OR52K1Q8NGK4 314 aa1.62□□□□□ -2.15
TOPBP1-204ENST00000505804 CDKL2Q92772 493 aa1.62□□□□□ -2.15
TOPBP1-204ENST00000505804 PYURFQ96I23 114 aa1.62□□□□□ -2.15
TOPBP1-204ENST00000505804 NAP1L5Q96NT1 182 aaPredicted RBP1.62□□□□□ -2.15
TOPBP1-204ENST00000505804 CIB1Q99828 191 aa1.62□□□□□ -2.15
TOPBP1-204ENST00000505804 SLC25A31Q9H0C2 315 aa1.62□□□□□ -2.15
TOPBP1-204ENST00000505804 PGPA6NDG6 321 aa1.61□□□□□ -2.15
TOPBP1-204ENST00000505804 M0QXV9 152 aa1.61□□□□□ -2.15
TOPBP1-204ENST00000505804 SPOPO43791 374 aa1.61□□□□□ -2.15
TOPBP1-204ENST00000505804 VAPBO95292 243 aa1.61□□□□□ -2.15
TOPBP1-204ENST00000505804 CSTAP01040 98 aa1.61□□□□□ -2.15
TOPBP1-204ENST00000505804 PDYNP01213 254 aa1.61□□□□□ -2.15
TOPBP1-204ENST00000505804 CBR1P16152 277 aa1.61□□□□□ -2.15
TOPBP1-204ENST00000505804 RAB38P57729 211 aa1.61□□□□□ -2.15
TOPBP1-204ENST00000505804 NXNL2Q5VZ03 156 aa1.61□□□□□ -2.15
TOPBP1-204ENST00000505804 LYZL2Q7Z4W2 148 aa1.61□□□□□ -2.15
TOPBP1-204ENST00000505804 MSRB3Q8IXL7 192 aa1.61□□□□□ -2.15
TOPBP1-204ENST00000505804 HS3ST5Q8IZT8 346 aa1.61□□□□□ -2.15
TOPBP1-204ENST00000505804 NELFBQ8WX92 580 aa1.61□□□□□ -2.15
TOPBP1-204ENST00000505804 RAD51AP1Q96B01 352 aa1.61□□□□□ -2.15
TOPBP1-204ENST00000505804 C20orf166-AS1Q96NR2 134 aa1.61□□□□□ -2.15
TOPBP1-204ENST00000505804 TSSK6Q9BXA6 273 aa1.61□□□□□ -2.15
TOPBP1-204ENST00000505804 OR5V1Q9UGF6 321 aa1.61□□□□□ -2.15
TOPBP1-204ENST00000505804 CHTOPQ9Y3Y2 248 aaKnown RBP1.61□□□□□ -2.15
TOPBP1-204ENST00000505804 FADS3Q9Y5Q0 445 aa1.61□□□□□ -2.15
TOPBP1-204ENST00000505804 YLPM1P49750 1951 aaKnown RBP1.6□□□□□ -2.15
TOPBP1-204ENST00000505804 TRAV8-3A0A0A6YYJ7 113 aa1.6□□□□□ -2.15
TOPBP1-204ENST00000505804 E7EWF7 191 aa1.6□□□□□ -2.15
TOPBP1-204ENST00000505804 ZNF22P17026 224 aaPredicted RBP1.6□□□□□ -2.15
TOPBP1-204ENST00000505804 BGNP21810 368 aa1.6□□□□□ -2.15
TOPBP1-204ENST00000505804 RAB25P57735 213 aa1.6□□□□□ -2.15
TOPBP1-204ENST00000505804 DSTNP60981 165 aa1.6□□□□□ -2.15
TOPBP1-204ENST00000505804 C2orf80Q0P641 193 aa1.6□□□□□ -2.15
TOPBP1-204ENST00000505804 ZNF181Q2M3W8 571 aa1.6□□□□□ -2.15
TOPBP1-204ENST00000505804 OR10D4PQ8NGN7 298 aa1.6□□□□□ -2.15
TOPBP1-204ENST00000505804 LMX1AQ8TE12 382 aa1.6□□□□□ -2.15
TOPBP1-204ENST00000505804 OR2D2Q9H210 308 aa1.6□□□□□ -2.15
TOPBP1-204ENST00000505804 MRPL16Q9NX20 251 aaKnown RBP1.6□□□□□ -2.15
TOPBP1-204ENST00000505804 SAMHD1Q9Y3Z3 626 aaKnown RBP1.6□□□□□ -2.15
TOPBP1-204ENST00000505804 ATRNO75882 1429 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 CACNA1SQ13698 1873 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 OR5H14A6NHG9 310 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 ZMPSTE24O75844 475 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 OPN1SWP03999 348 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 GIMD1P0DJR0 217 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 ELK4P28324 431 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 RANBP1P43487 201 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 GCLMP48507 274 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 DNASE1L1P49184 302 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 XIAPP98170 497 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 GOLGA7BQ2TAP0 167 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 ELP2Q6IA86 826 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 LAIR2Q6ISS4 152 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 SPNS3Q6ZMD2 512 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 OR8G5Q8NG78 346 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 LGALS14Q8TCE9 139 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 CPB2Q96IY4 423 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 OR8B2Q96RD0 313 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 HINT2Q9BX68 163 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 RMND1Q9NWS8 449 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 CYB5R1Q9UHQ9 305 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 LCTP09848 1927 aa1.59□□□□□ -2.15
TOPBP1-204ENST00000505804 SHANK3Q9BYB0 1731 aa1.59□□□□□ -2.16
TOPBP1-204ENST00000505804 TRBV24-1A0A075B6N3 115 aa1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 IGHV1-45A0A0A0MS14 117 aa1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 IGHV2-26A0A0B4J1V2 119 aa1.58□□□□□ -2.16
TOPBP1-204ENST00000505804 A0A1B0GTI1 187 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms