RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 SNX5Q9Y5X3 404 aa7.85□□□□□ -1.15
NEDD9-210ENST00000505589 V9GYS6 101 aa7.85□□□□□ -1.15
NEDD9-210ENST00000505589 LOC110117498-PIK3R3F6TDL0 507 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 SH2D1BO14796 132 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 HAND1O96004 215 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 IGLV1-47P01700 117 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 RPSAP08865 295 aaKnown RBP7.84□□□□□ -1.15
NEDD9-210ENST00000505589 CD24P25063 80 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 CD34P28906 385 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 CDX1P47902 265 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-210ENST00000505589 CRISP1P54107 249 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 ATP1B3P54709 279 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 RAB25P57735 213 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 ZNF146Q15072 292 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 HLA-DRB5Q30154 266 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 CXorf66Q5JRM2 361 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-210ENST00000505589 SPIN3Q5JUX0 258 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 FAM27D1Q5T7N8 215 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 ETV3LQ6ZN32 361 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 SLC35E3Q7Z769 313 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 ELMOD2Q8IZ81 293 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 DRAM1Q8N682 238 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 OR14K1Q8NGZ2 314 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 TRMT10AQ8TBZ6 339 aaKnown RBP7.84□□□□□ -1.15
NEDD9-210ENST00000505589 EMG1Q92979 244 aaKnown RBP7.84□□□□□ -1.15
NEDD9-210ENST00000505589 RPEQ96AT9 228 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 CHCHD6Q9BRQ6 235 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 RHOFQ9HBH0 211 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 SLC25A19Q9HC21 320 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 H2AFY2Q9P0M6 372 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-210ENST00000505589 IKZF2Q9UKS7 526 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 GTF2A1LQ9UNN4 478 aa7.84□□□□□ -1.15
NEDD9-210ENST00000505589 ZNF256Q9Y2P7 627 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-210ENST00000505589 FAM230AA0A1W2PPH8 454 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 FAM90A18PA6NE21 464 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 FAM90A16PA6NEW6 464 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 FAM90A20PA6NIJ5 464 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 FAM90A9PA6NNJ1 464 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 FAM90A12PA8MX19 464 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 FAM90A5PA8MXJ8 464 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 SEC14L6B5MCN3 397 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 AP4M1O00189 453 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 TNFAIP8O95379 198 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 IGHG2P01859 326 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 AMY1AP04745 511 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 AMY2AP04746 511 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 ELANEP08246 267 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 FAM90A15PP0C7V4 464 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 FAM90A13PP0C7W8 464 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 FAM90A14PP0C7W9 464 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 FAM90A24PP0C7X0 464 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 CDK2P24941 298 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 RAB7AP51149 207 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 P2RX3P56373 397 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 ISL1P61371 349 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 HES1Q14469 280 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 GINS1Q14691 196 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 PTGES3Q15185 160 aaKnown RBP7.83□□□□□ -1.16
NEDD9-210ENST00000505589 NKAPLQ5M9Q1 402 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 TPTE2P1Q5T6R2 138 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 BCL2L15Q5TBC7 163 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 LCNL1Q6ZST4 164 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 ANGPTL5Q86XS5 388 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 CPOQ8IVL8 374 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 FAM58AQ8N1B3 248 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 OR9G1Q8NH87 305 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 HAVCR2Q8TDQ0 301 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 FBLIM1Q8WUP2 373 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 RCHY1Q96PM5 261 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 ASCL2Q99929 193 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 NEK6Q9HC98 313 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 IMPAD1Q9NX62 359 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 MTCH1Q9NZJ7 389 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 OR6C3Q9NZP0 311 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 OR52A1Q9UKL2 312 aa7.83□□□□□ -1.16
NEDD9-210ENST00000505589 A0A087X0M5 115 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 LCE6AA0A183 80 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 A0A1B0GX30 115 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 TMEM82A0PJX8 343 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 MAGEA13PA6NCF6 341 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 ZNF729A6NN14 1252 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-210ENST00000505589 CCRL2O00421 344 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 MPZL2O60487 215 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 TTRP02766 147 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 TMEM11P17152 192 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 JUNBP17275 347 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-210ENST00000505589 C21orf33P30042 268 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-210ENST00000505589 PTGFRP43088 359 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 RBP2P50120 134 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 ZNF91Q05481 1191 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 KCTD21Q4G0X4 260 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 C12orf73Q69YU5 71 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 C10orf99Q6UWK7 81 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 SLC16A12Q6ZSM3 486 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 Q6ZSR3 168 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 ZNF429Q86V71 674 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 OR8H3Q8N146 312 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 STPG2Q8N412 459 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 IQCF1Q8N6M8 205 aa7.82□□□□□ -1.16
NEDD9-210ENST00000505589 DNAAF1Q8NEP3 725 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms