RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 PRSS29PA6NIE9 313 aa9.49□□□□□ -0.89
LSM6-204ENST00000504181 SIRPB1O00241 398 aa9.49□□□□□ -0.89
LSM6-204ENST00000504181 HSD17B6O14756 317 aa9.49□□□□□ -0.89
LSM6-204ENST00000504181 ATP6V0E1O15342 81 aa9.49□□□□□ -0.89
LSM6-204ENST00000504181 HSPB1P04792 205 aaKnown RBP9.49□□□□□ -0.89
LSM6-204ENST00000504181 TFAP2AP05549 437 aa9.49□□□□□ -0.89
LSM6-204ENST00000504181 SLC2A2P11168 524 aaPredicted RBP9.49□□□□□ -0.89
LSM6-204ENST00000504181 CRMP1Q14194 572 aa9.49□□□□□ -0.89
LSM6-204ENST00000504181 C17orf58Q2M2W7 97 aa9.49□□□□□ -0.89
LSM6-204ENST00000504181 LCN12Q6JVE5 192 aa9.49□□□□□ -0.89
LSM6-204ENST00000504181 OR2T12Q8NG77 320 aa9.49□□□□□ -0.89
LSM6-204ENST00000504181 OR8J3Q8NGG0 315 aa9.49□□□□□ -0.89
LSM6-204ENST00000504181 FLYWCH2Q96CP2 140 aaKnown RBP9.49□□□□□ -0.89
LSM6-204ENST00000504181 PKIBQ9C010 78 aa9.49□□□□□ -0.89
LSM6-204ENST00000504181 EGLN3Q9H6Z9 239 aa9.49□□□□□ -0.89
LSM6-204ENST00000504181 SRD5A3Q9H8P0 318 aa9.49□□□□□ -0.89
LSM6-204ENST00000504181 GPR84Q9NQS5 396 aa9.49□□□□□ -0.89
LSM6-204ENST00000504181 GMPR2Q9P2T1 348 aaKnown RBP9.49□□□□□ -0.89
LSM6-204ENST00000504181 A0A0U1RQV5 110 aa9.48□□□□□ -0.89
LSM6-204ENST00000504181 FXYD1O00168 92 aa9.48□□□□□ -0.89
LSM6-204ENST00000504181 TPPPO94811 219 aa9.48□□□□□ -0.89
LSM6-204ENST00000504181 DIRAS1O95057 198 aa9.48□□□□□ -0.89
LSM6-204ENST00000504181 CALCBP10092 127 aa9.48□□□□□ -0.89
LSM6-204ENST00000504181 F2RL1P55085 397 aa9.48□□□□□ -0.89
LSM6-204ENST00000504181 MFGE8Q08431 387 aaPredicted RBP9.48□□□□□ -0.89
LSM6-204ENST00000504181 CLVS2Q5SYC1 327 aa9.48□□□□□ -0.89
LSM6-204ENST00000504181 OR52L1Q8NGH7 329 aa9.48□□□□□ -0.89
LSM6-204ENST00000504181 OR51E1Q8TCB6 317 aa9.48□□□□□ -0.89
LSM6-204ENST00000504181 HAVCR2Q8TDQ0 301 aa9.48□□□□□ -0.89
LSM6-204ENST00000504181 THEM6Q8WUY1 208 aa9.48□□□□□ -0.89
LSM6-204ENST00000504181 PHLDA1Q8WV24 401 aaPredicted RBP9.48□□□□□ -0.89
LSM6-204ENST00000504181 NEURL2Q9BR09 285 aa9.48□□□□□ -0.89
LSM6-204ENST00000504181 CADM1Q9BY67 442 aaKnown RBP9.48□□□□□ -0.89
LSM6-204ENST00000504181 PARP11Q9NR21 331 aa9.48□□□□□ -0.89
LSM6-204ENST00000504181 TAS2R1Q9NYW7 299 aa9.48□□□□□ -0.89
LSM6-204ENST00000504181 PSG11Q9UQ72 335 aa9.48□□□□□ -0.89
LSM6-204ENST00000504181 TRAV41A0A0B4J266 112 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 A0A1W2PPE3 182 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 FAM230AA0A1W2PPH8 454 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 TMEM120BA0PK00 339 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 ODAMA1E959 279 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 FAM90A10PA6NDY2 464 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 A6NIN4 97 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 ZNF729A6NN14 1252 aaPredicted RBP9.47□□□□□ -0.89
LSM6-204ENST00000504181 XRCC3O43542 346 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 MOSP00540 346 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 LYNP07948 512 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 ATP6V1B1P15313 513 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 H2AFXP16104 143 aaPredicted RBP9.47□□□□□ -0.89
LSM6-204ENST00000504181 ZNF816Q0VGE8 651 aaPredicted RBP9.47□□□□□ -0.89
LSM6-204ENST00000504181 GALEQ14376 348 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 LTC4SQ16873 150 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 LINC01590Q5TEZ4 76 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 SHFQ7M4L6 423 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 LYG2Q86SG7 212 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 OR10X1Q8NGY0 326 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.47□□□□□ -0.89
LSM6-204ENST00000504181 FUZQ9BT04 418 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 NMNAT2Q9BZQ4 307 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 PLEKHA1Q9HB21 404 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 ETAA1Q9NY74 926 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 COPS3Q9UNS2 423 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 FBXO7Q9Y3I1 522 aa9.47□□□□□ -0.89
LSM6-204ENST00000504181 FAM32AQ9Y421 112 aaKnown RBP9.47□□□□□ -0.89
LSM6-204ENST00000504181 FUOMA2VDF0 154 aa9.46□□□□□ -0.9
LSM6-204ENST00000504181 DLGAP1O14490 977 aa9.46□□□□□ -0.9
LSM6-204ENST00000504181 GAPDHP04406 335 aaKnown RBP9.46□□□□□ -0.9
LSM6-204ENST00000504181 CD7P09564 240 aa9.46□□□□□ -0.9
LSM6-204ENST00000504181 TNFRSF9Q07011 255 aa9.46□□□□□ -0.9
LSM6-204ENST00000504181 BNIP1Q12981 228 aa9.46□□□□□ -0.9
LSM6-204ENST00000504181 ENTHD1Q8IYW4 607 aa9.46□□□□□ -0.9
LSM6-204ENST00000504181 Q8N402 240 aa9.46□□□□□ -0.9
LSM6-204ENST00000504181 TEAD3Q99594 435 aa9.46□□□□□ -0.9
LSM6-204ENST00000504181 SLC25A19Q9HC21 320 aa9.46□□□□□ -0.9
LSM6-204ENST00000504181 RBFOX1Q9NWB1 397 aaKnown RBP9.46□□□□□ -0.9
LSM6-204ENST00000504181 A0A1W2PN81 502 aa9.45□□□□□ -0.9
LSM6-204ENST00000504181 ZNF736B4DX44 427 aaPredicted RBP9.45□□□□□ -0.9
LSM6-204ENST00000504181 SOX15O60248 233 aa9.45□□□□□ -0.9
LSM6-204ENST00000504181 DHRS3O75911 302 aa9.45□□□□□ -0.9
LSM6-204ENST00000504181 PRKACAP17612 351 aa9.45□□□□□ -0.9
LSM6-204ENST00000504181 RHCEP18577 417 aa9.45□□□□□ -0.9
LSM6-204ENST00000504181 GSTT1P30711 240 aa9.45□□□□□ -0.9
LSM6-204ENST00000504181 CHRNA7P36544 502 aa9.45□□□□□ -0.9
LSM6-204ENST00000504181 GSSP48637 474 aa9.45□□□□□ -0.9
LSM6-204ENST00000504181 BLVRAP53004 296 aa9.45□□□□□ -0.9
LSM6-204ENST00000504181 ECSCRQ19T08 205 aa9.45□□□□□ -0.9
LSM6-204ENST00000504181 TMEM42Q69YG0 159 aa9.45□□□□□ -0.9
LSM6-204ENST00000504181 SLC25A26Q70HW3 274 aa9.45□□□□□ -0.9
LSM6-204ENST00000504181 ZCCHC4Q9H5U6 513 aa9.45□□□□□ -0.9
LSM6-204ENST00000504181 MED20Q9H944 212 aa9.45□□□□□ -0.9
LSM6-204ENST00000504181 SEBOXQ9HB31 216 aaPredicted RBP9.45□□□□□ -0.9
LSM6-204ENST00000504181 FAM206AQ9NX38 181 aa9.45□□□□□ -0.9
LSM6-204ENST00000504181 NDE1Q9NXR1 346 aa9.45□□□□□ -0.9
LSM6-204ENST00000504181 NDUFAF4Q9P032 175 aa9.45□□□□□ -0.9
LSM6-204ENST00000504181 MRM2Q9UI43 246 aaKnown RBP9.45□□□□□ -0.9
LSM6-204ENST00000504181 IGKV1-27A0A075B6S5 117 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 KBTBD11-OT1A0A1B0GTJ5 212 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 OR11H12B2RN74 326 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 CXCR6O00574 342 aa9.44□□□□□ -0.9
LSM6-204ENST00000504181 ENTPD6O75354 484 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms