RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 OR2W3Q7Z3T1 314 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 LINC00596Q86U02 117 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 ZNRF1Q8ND25 227 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 KCNG3Q8TAE7 436 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 PPP1R35Q8TAP8 253 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 C1orf159Q96HA4 380 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 BCL7BQ9BQE9 202 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 TMEM59Q9BXS4 323 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 SELENOIQ9C0D9 397 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 DCSTAMPQ9H295 470 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 LIN7BQ9HAP6 207 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 SEBOXQ9HB31 216 aaPredicted RBP8.32□□□□□ -1.08
NUP54-203ENST00000504173 SLC25A10Q9UBX3 287 aaPredicted RBP8.32□□□□□ -1.08
NUP54-203ENST00000504173 OR5V1Q9UGF6 321 aa8.32□□□□□ -1.08
NUP54-203ENST00000504173 TMEM272A0A1B0GTI8 110 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 TMEM82A0PJX8 343 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 TK1P04183 234 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 MSMBP08118 114 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 ZFP36P26651 326 aaKnown RBP8.31□□□□□ -1.08
NUP54-203ENST00000504173 QRFPP83859 136 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 SRSF2Q01130 221 aaKnown RBP8.31□□□□□ -1.08
NUP54-203ENST00000504173 UNC119Q13432 240 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 BLMHQ13867 455 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 GRK1Q15835 563 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 MPV17LQ2QL34 196 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 Q6P435 159 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 C12orf54Q6X4T0 127 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 GLCCI1Q86VQ1 547 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 CROCCP3Q8IVE0 287 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 FGFRL1Q8N441 504 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 CHST4Q8NCG5 386 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 NDNFQ8TB73 568 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 H1FXQ92522 213 aaKnown RBP8.31□□□□□ -1.08
NUP54-203ENST00000504173 ISOC1Q96CN7 298 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 MSI2Q96DH6 328 aaKnown RBP8.31□□□□□ -1.08
NUP54-203ENST00000504173 SNX22Q96L94 193 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 Q96M66 194 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 URM1Q9BTM9 101 aaKnown RBP8.31□□□□□ -1.08
NUP54-203ENST00000504173 BEX2Q9BXY8 128 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 CHST6Q9GZX3 395 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 FAM234AQ9H0X4 552 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 CEPT1Q9Y6K0 416 aa8.31□□□□□ -1.08
NUP54-203ENST00000504173 MALRD1Q5VYJ5 2156 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 LOC105371242A0A075B767 164 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 TRAV20A0A0B4J274 112 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 FAM90A10PA6NDY2 464 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 FAM90A18PA6NE21 464 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 FAM90A16PA6NEW6 464 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 FAM90A20PA6NIJ5 464 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 FAM90A8PA6NJQ4 464 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 FAM90A7PA6NKC0 464 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 FAM90A22PA8MWA6 464 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 FAM90A12PA8MX19 464 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 FAM90A5PA8MXJ8 464 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 FAM90A23PA8MXZ1 464 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 K7N7A8 449 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 SLC33A1O00400 549 aaPredicted RBP8.3□□□□□ -1.08
NUP54-203ENST00000504173 HSPB6O14558 160 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 LDLRAD4O15165 306 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 GPR37O15354 613 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 ZNF737O75373 536 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 FCN3O75636 299 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 ECDO95905 644 aaPredicted RBP8.3□□□□□ -1.08
NUP54-203ENST00000504173 TGFAP01135 160 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 FAM90A15PP0C7V4 464 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 FAM90A13PP0C7W8 464 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 FAM90A14PP0C7W9 464 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 FAM90A24PP0C7X0 464 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 SNRPBP14678 240 aaKnown RBP8.3□□□□□ -1.08
NUP54-203ENST00000504173 LMO1P25800 156 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 OR3A1P47881 315 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 RPS27AP62979 156 aaKnown RBP8.3□□□□□ -1.08
NUP54-203ENST00000504173 EDDM3AQ14507 147 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 PAN3Q58A45 887 aaKnown RBP8.3□□□□□ -1.08
NUP54-203ENST00000504173 ATAD3CQ5T2N8 411 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 CD276Q5ZPR3 534 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 METAP1DQ6UB28 335 aaPredicted RBP8.3□□□□□ -1.08
NUP54-203ENST00000504173 C17orf107Q6ZR85 190 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 BTN2A1Q7KYR7 527 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 GDPD3Q7L5L3 318 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 OR8H2Q8N162 312 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 SUMF2Q8NBJ7 301 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 OR5D13Q8NGL4 314 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 LGALS14Q8TCE9 139 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 NEK7Q8TDX7 302 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 SLC25A46Q96AG3 418 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 TMEM186Q96B77 213 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 PPA2Q9H2U2 334 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 IFT22Q9H7X7 185 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 ZNF581Q9P0T4 197 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 FBLN5Q9UBX5 448 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 RAB22AQ9UL26 194 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 YLPM1P49750 1951 aaKnown RBP8.3□□□□□ -1.08
NUP54-203ENST00000504173 VWFP04275 2813 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 DOCK11Q5JSL3 2073 aa8.3□□□□□ -1.08
NUP54-203ENST00000504173 TRAV24A0A0B4J272 114 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 IGHV2-70DA0A0C4DH43 119 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 C22orf46C9J442 243 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 H3BMQ9 156 aa8.29□□□□□ -1.08
NUP54-203ENST00000504173 H3BUI4 141 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms