RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 TREM2Q9NZC2 230 aa5.79□□□□□ -1.48
TOPBP1-203ENST00000503464 ZNF222Q9UK12 451 aa5.79□□□□□ -1.48
TOPBP1-203ENST00000503464 FLVCR2Q9UPI3 526 aa5.79□□□□□ -1.48
TOPBP1-203ENST00000503464 PLEKHA6Q9Y2H5 1048 aa5.79□□□□□ -1.48
TOPBP1-203ENST00000503464 DCHS2Q6V1P9 2916 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 KIAA2026Q5HYC2 2103 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 CHD6Q8TD26 2715 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 A0A1B0GW55 424 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 FUOMA2VDF0 154 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 CLEC18AA5D8T8 446 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 NAP1L6A6NFF2 107 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 OR2AT4A6NND4 320 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 B9A039 149 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 PRSS44E7EML9 344 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 HS3ST1O14792 307 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 DEGS1O15121 323 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 ZNF737O75373 536 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 FCN3O75636 299 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 NDUFB6O95139 128 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 ZNF205O95201 554 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 RAB3DO95716 219 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 CYB5R3P00387 301 aaPredicted RBP5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 KNG1P01042 644 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 PMP2P02689 132 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 HPXP02790 462 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 SOD3P08294 240 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 DUX4L2P0CJ85 424 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 DUX4L3P0CJ86 424 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 DUX4L4P0CJ87 422 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 DUX4L5P0CJ88 424 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 DUX4L6P0CJ89 424 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 DUX4L7P0CJ90 424 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 PSG2P11465 335 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 ZNF44P15621 663 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 GLRA1P23415 457 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 DTYMKP23919 212 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 CBX5P45973 191 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 OR3A1P47881 315 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 BCAP31P51572 246 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 RAB25P57735 213 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 ARL6IP1Q15041 203 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 TESK1Q15569 626 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 FAM209AQ5JX71 171 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 VAX1Q5SQQ9 334 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 SHEQ5VZ18 495 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 ZNF880Q6PDB4 577 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 DUX4L9Q6RFH8 374 aaPredicted RBP5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 CLEC18BQ6UXF7 455 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 C17orf107Q6ZR85 190 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 BTN2A1Q7KYR7 527 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 MUC15Q8N387 334 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 CLEC18CQ8NCF0 446 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 BEST4Q8NFU0 473 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 OR5T2Q8NGG2 359 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 OR51S1Q8NGJ8 323 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 OR4K15Q8NH41 348 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 CREB3L1Q96BA8 519 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 COQ2Q96H96 371 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 DIRC2Q96SL1 478 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 CMSS1Q9BQ75 279 aaKnown RBP5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 ST6GALNAC5Q9BVH7 336 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 C20orf85Q9H1P6 137 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 DPAGT1Q9H3H5 408 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 Q9N2K0 584 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 IFT46Q9NQC8 304 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 NUDT15Q9NV35 164 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 ZNF701Q9NV72 531 aaPredicted RBP5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 MCUBQ9NWR8 336 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 SLC2A8Q9NY64 477 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 RASL12Q9NYN1 266 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 DUX4Q9UBX2 424 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 OR14J1Q9UGF5 321 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 ZNF221Q9UK13 617 aa5.78□□□□□ -1.48
TOPBP1-203ENST00000503464 FAM208BQ5VWN6 2430 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 TRAV6A0A075B6T7 132 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 TRBV6-6A0A0A6YYG2 114 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 TRAV39A0A0B4J263 110 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 IGKV1-6A0A0C4DH72 117 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 RFPL4AA6NLU0 287 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 A6NNC1 897 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 CENPXA8MT69 81 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 MCRIP1C9JLW8 97 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 RFPL4AL1F8VTS6 287 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 SDCBPO00560 298 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 ARPC1BO15143 372 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 TPD52L2O43399 206 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 AMY2AP04746 511 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 CSN2P05814 226 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 GLAP06280 429 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 VSIG10L2P0DP72 767 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 SELLP14151 372 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 TBPP20226 339 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 PPOXP50336 477 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 MECP2P51608 486 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 COL10A1Q03692 680 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 CD300CQ08708 224 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 ATXN7L3Q14CW9 347 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 HERPUD1Q15011 391 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 CARTPTQ16568 116 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 TATDN3Q17R31 274 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms