RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 RTTNQ86VV8 2226 aa7.15□□□□□ -1.27
SF3A1-210ENST00000498259 TRAV38-1A0A0B4J264 116 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 TMEM82A0PJX8 343 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 TMEM30CPA0ZSE6 113 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 HMX3A6NHT5 357 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 SRRM5B3KS81 715 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 TRDCB7Z8K6 153 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 M0QYG6 137 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 ARPC1BO15143 372 aaKnown RBP7.14□□□□□ -1.27
SF3A1-210ENST00000498259 NDUFA2O43678 99 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 SSNA1O43805 119 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 ZG16O60844 167 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 OR2H2O95918 312 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 NAPSAO96009 420 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 PMP2P02689 132 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 CSN2P05814 226 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 HNRNPCP07910 306 aaKnown RBP eCLIP7.14□□□□□ -1.27
SF3A1-210ENST00000498259 OR5H8P0DN80 308 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 DSPP15924 2871 aaKnown RBP7.14□□□□□ -1.27
SF3A1-210ENST00000498259 SPNP16150 400 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 PRDX2P32119 198 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 BTCP35070 178 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 PPOXP50336 477 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 HERV-K104P61576 105 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 SEC61A1P61619 476 aaKnown RBP7.14□□□□□ -1.27
SF3A1-210ENST00000498259 TFF3Q07654 80 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 MPPED2Q15777 294 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 HFEQ30201 348 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 C4orf46Q504U0 113 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 TMEM255AQ5JRV8 349 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 C6orf183Q5T699 404 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 PRAMEF6Q5VXH4 476 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 CD276Q5ZPR3 534 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 SLC35E4Q6ICL7 350 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 OR52W1Q6IF63 320 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 LIN54Q6MZP7 749 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 DHRS11Q6UWP2 260 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 OVCH2Q7RTZ1 564 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 MOGAT3Q86VF5 341 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 C11orf53Q8IXP5 236 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 CADM3Q8N126 398 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 ZNF561Q8N587 486 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 GVQW1Q8N7I0 195 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 ZNF565Q8N9K5 539 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 OR4S1Q8NGB4 309 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 OR4A4PQ8NGN8 299 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 ITLN1Q8WWA0 313 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 ASB13Q8WXK3 278 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 RDH5Q92781 318 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 UPRTQ96BW1 309 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 VRK1Q99986 396 aaPredicted RBP7.14□□□□□ -1.27
SF3A1-210ENST00000498259 TMEM204Q9BSN7 226 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 TINAGL1Q9GZM7 467 aaPredicted RBP7.14□□□□□ -1.27
SF3A1-210ENST00000498259 FAM234AQ9H0X4 552 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 DNTTIP1Q9H147 329 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 CLEC4MQ9H2X3 399 aaPredicted RBP7.14□□□□□ -1.27
SF3A1-210ENST00000498259 OR51J1Q9H342 316 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 TMEM165Q9HC07 324 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 CHD8Q9HCK8 2581 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 GCM1Q9NP62 436 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 CRIM1Q9NZV1 1036 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 OR14J1Q9UGF5 321 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 OPN4Q9UHM6 478 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 TRAPPC2LQ9UL33 140 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 PCDHB10Q9UN67 800 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 WIPI2Q9Y4P8 454 aa7.14□□□□□ -1.27
SF3A1-210ENST00000498259 KLF2Q9Y5W3 355 aaPredicted RBP7.14□□□□□ -1.27
SF3A1-210ENST00000498259 C7orf66A4D0T2 115 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 WIPF3A6NGB9 483 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 NKX6-3A6NJ46 265 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 RFPL4AA6NLU0 287 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 OR2AT4A6NND4 320 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 E7EQL1 145 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 RFPL4AL1F8VTS6 287 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 F8VVB4 439 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 F8VWA3 439 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 SLC33A1O00400 549 aaPredicted RBP7.13□□□□□ -1.27
SF3A1-210ENST00000498259 MGST3O14880 152 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 CCNKO75909 580 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 FSTL3O95633 263 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 LHBP01229 141 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 ANXA3P12429 323 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 GZMHP20718 246 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 DUSP1P28562 367 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 RRAS2P62070 204 aaPredicted RBP7.13□□□□□ -1.27
SF3A1-210ENST00000498259 PAX5Q02548 391 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 CBX3Q13185 183 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 DAZAP2Q15038 168 aaPredicted RBP7.13□□□□□ -1.27
SF3A1-210ENST00000498259 IGFBP7Q16270 282 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 Q6P435 159 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 GLDNQ6ZMI3 551 aaPredicted RBP7.13□□□□□ -1.27
SF3A1-210ENST00000498259 SLC36A1Q7Z2H8 476 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 OR10J5Q8NHC4 309 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 FAM216AQ8WUB2 273 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 GIMAP1Q8WWP7 306 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 ZNF486Q96H40 463 aaPredicted RBP7.13□□□□□ -1.27
SF3A1-210ENST00000498259 SNX22Q96L94 193 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 ZNF488Q96MN9 340 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 SLC6A7Q99884 636 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 NCOR1P1Q9H4R4 102 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms