RNA–Protein interactions for RNA: ENST00000498189.1

BBS9-215, Transcript of Bardet-Biedl syndrome 9, human

TSL 2

Gene BBS9, Length 614 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS9-215	ENST00000498189	C19orf18	Q8NEA5	215 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	OR51L1	Q8NGJ5	315 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	OR8D4	Q8NGM9	314 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	OR4Q3	Q8NH05	313 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	PPP1R35	Q8TAP8	253 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	CANT1	Q8WVQ1	401 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	TRUB1	Q8WWH5	349 aa	Known RBP	5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	C22orf15	Q8WYQ4	148 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	ST8SIA4	Q92187	359 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	CPNE2	Q96FN4	548 aa	Predicted RBP	5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	DUS3L	Q96G46	650 aa	Known RBP	5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	RNF170	Q96K19	258 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	CCDC140	Q96MF4	163 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	CNN2	Q99439	309 aa	Known RBP	5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	NIPSNAP1	Q9BPW8	284 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	DCTN5	Q9BTE1	182 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	ADI1	Q9BV57	179 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	MRPS26	Q9BYN8	205 aa	Known RBP	5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	RANBP3	Q9H6Z4	567 aa	Predicted RBP	5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	RHOF	Q9HBH0	211 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	ESM1	Q9NQ30	184 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	NLK	Q9UBE8	527 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	SLC25A10	Q9UBX3	287 aa	Predicted RBP	5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	NUFIP1	Q9UHK0	495 aa	Known RBP	5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	RPH3AL	Q9UNE2	315 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	COPS3	Q9UNS2	423 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	SLC7A11	Q9UPY5	501 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	MYRF	Q9Y2G1	1151 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	PCDHGB1	Q9Y5G3	927 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189	ORC6	Q9Y5N6	252 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189		X6R8D5	127 aa		5.74	□□□□□ -1.49
BBS9-215	ENST00000498189		A0A075B6Q4	140 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	CENPVL3	A0A0U1RRI6	287 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189		A0A1W2PQ09	198 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	TCRBV3S1	A0A5B6	114 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189		G3V2T6	193 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	ZNF701	M0R085	212 aa	Predicted RBP	5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	CDIPT	O14735	213 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	HOXA3	O43365	443 aa	Predicted RBP	5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	FKBP6	O75344	327 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	NRAS	P01111	189 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	RBP4	P02753	201 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	ALDOB	P05062	364 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	S100A8	P05109	93 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	GYPB	P06028	91 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	LINC00614	P0C842	121 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	IGHV4-38-2	P0DP08	117 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	MMP9	P14780	707 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	GPX4	P36969	197 aa	Predicted RBP	5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	DEFA6	Q01524	100 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	SLC34A1	Q06495	639 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	DBP	Q10586	325 aa	Predicted RBP	5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	ALKBH1	Q13686	389 aa	Known RBP	5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	OXA1L	Q15070	435 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	PNLIPRP3	Q17RR3	467 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	DEFB112	Q30KQ8	113 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	MOGAT2	Q3SYC2	334 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	SPRN	Q5BIV9	151 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	STUM	Q69YW2	141 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	ZNF788	Q6ZQV5	615 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	PLEKHG7	Q6ZR37	379 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	MEPCE	Q7L2J0	689 aa	Known RBP	5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	FAM220A	Q7Z4H9	259 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	CPO	Q8IVL8	374 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189		Q8N1Y9	231 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	MAFIP	Q8WZ33	124 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	PIGC	Q92535	297 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	FOXRED1	Q96CU9	486 aa	Predicted RBP	5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	TEAD3	Q99594	435 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	PKP2	Q99959	881 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	PARD6G	Q9BYG4	376 aa	Predicted RBP	5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	SIRPD	Q9H106	197 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	GAL3ST2	Q9H3Q3	398 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	PLEKHA1	Q9HB21	404 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	SEBOX	Q9HB31	216 aa	Predicted RBP	5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	ING3	Q9NXR8	418 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	ONECUT1	Q9UBC0	465 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	NKX1-2	Q9UD57	310 aa	Predicted RBP	5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	CLEC2D	Q9UHP7	191 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189	PITPNC1	Q9UKF7	332 aa		5.73	□□□□□ -1.49
BBS9-215	ENST00000498189		A4D1N5	150 aa		5.72	□□□□□ -1.49
BBS9-215	ENST00000498189	ANKRD61	A6NGH8	418 aa		5.72	□□□□□ -1.49
BBS9-215	ENST00000498189	RFPL4A	A6NLU0	287 aa		5.72	□□□□□ -1.49
BBS9-215	ENST00000498189	OR2AT4	A6NND4	320 aa		5.72	□□□□□ -1.49
BBS9-215	ENST00000498189	ZNF850	A8MQ14	1090 aa		5.72	□□□□□ -1.49
BBS9-215	ENST00000498189	ZNF732	B4DXR9	585 aa		5.72	□□□□□ -1.49
BBS9-215	ENST00000498189	RFPL4AL1	F8VTS6	287 aa		5.72	□□□□□ -1.49
BBS9-215	ENST00000498189	RNASEK-C17orf49	H0YIS7	233 aa		5.72	□□□□□ -1.49
BBS9-215	ENST00000498189		J3QT63	122 aa		5.72	□□□□□ -1.49
BBS9-215	ENST00000498189	HSPA12A	O43301	675 aa		5.72	□□□□□ -1.49
BBS9-215	ENST00000498189	KCNAB3	O43448	404 aa		5.72	□□□□□ -1.49
BBS9-215	ENST00000498189	MITF	O75030	526 aa	Predicted RBP	5.72	□□□□□ -1.49
BBS9-215	ENST00000498189	IFNA6	P05013	189 aa		5.72	□□□□□ -1.49
BBS9-215	ENST00000498189	MELTF	P08582	738 aa		5.72	□□□□□ -1.49
BBS9-215	ENST00000498189	OR2T7	P0C7T2	308 aa		5.72	□□□□□ -1.49
BBS9-215	ENST00000498189	ZNF735	P0CB33	412 aa		5.72	□□□□□ -1.49
BBS9-215	ENST00000498189	SLC2A1	P11166	492 aa		5.72	□□□□□ -1.49
BBS9-215	ENST00000498189	EGR1	P18146	543 aa		5.72	□□□□□ -1.49
BBS9-215	ENST00000498189	RPS27	P42677	84 aa	Known RBP	5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 71 ms