RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 FAM185AQ8N0U4 392 aa13.21□□□□□ -0.29
SSBP1-214ENST00000498107 FGFRL1Q8N441 504 aa13.21□□□□□ -0.29
SSBP1-214ENST00000498107 YIPF6Q96EC8 236 aa13.21□□□□□ -0.29
SSBP1-214ENST00000498107 C1orf147Q96MC9 270 aaPredicted RBP13.21□□□□□ -0.29
SSBP1-214ENST00000498107 ZFHX3Q15911 3703 aa13.21□□□□□ -0.29
SSBP1-214ENST00000498107 FN1P02751 2386 aaKnown RBP13.21□□□□□ -0.3
SSBP1-214ENST00000498107 A0A0G2JK05 382 aa13.2□□□□□ -0.3
SSBP1-214ENST00000498107 hCG_1809904A0A1W2PP81 198 aa13.2□□□□□ -0.3
SSBP1-214ENST00000498107 A0A1W2PPE2 198 aa13.2□□□□□ -0.3
SSBP1-214ENST00000498107 A0A1W2PR64 198 aa13.2□□□□□ -0.3
SSBP1-214ENST00000498107 A0A1W2PRV1 198 aa13.2□□□□□ -0.3
SSBP1-214ENST00000498107 SLC33A1O00400 549 aaPredicted RBP13.2□□□□□ -0.3
SSBP1-214ENST00000498107 PSPNO60542 156 aa13.2□□□□□ -0.3
SSBP1-214ENST00000498107 SRD5A1P18405 259 aa13.2□□□□□ -0.3
SSBP1-214ENST00000498107 CFPP27918 469 aa13.2□□□□□ -0.3
SSBP1-214ENST00000498107 EDDM3BP56851 147 aa13.2□□□□□ -0.3
SSBP1-214ENST00000498107 MEF2CQ06413 473 aaPredicted RBP13.2□□□□□ -0.3
SSBP1-214ENST00000498107 PAN3Q58A45 887 aaKnown RBP13.2□□□□□ -0.3
SSBP1-214ENST00000498107 C1orf122Q6ZSJ8 110 aa13.2□□□□□ -0.3
SSBP1-214ENST00000498107 OR2W3Q7Z3T1 314 aa13.2□□□□□ -0.3
SSBP1-214ENST00000498107 OR13F1Q8NGS4 319 aa13.2□□□□□ -0.3
SSBP1-214ENST00000498107 GFI1Q99684 422 aa13.2□□□□□ -0.3
SSBP1-214ENST00000498107 SELENOIQ9C0D9 397 aa13.2□□□□□ -0.3
SSBP1-214ENST00000498107 ONECUT1Q9UBC0 465 aa13.2□□□□□ -0.3
SSBP1-214ENST00000498107 STEAP1Q9UHE8 339 aa13.2□□□□□ -0.3
SSBP1-214ENST00000498107 A0A1W2PP11 408 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 hADV38S2A0JD32 116 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 IFITM5A6NNB3 132 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 M0R1W7 72 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 GEMIN2O14893 280 aaKnown RBP13.19□□□□□ -0.3
SSBP1-214ENST00000498107 TOX4O94842 621 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 OR3A1P47881 315 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 P2RX3P56373 397 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 ARF6P62330 175 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 EDDM3AQ14507 147 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 FAM189A2Q15884 450 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 TAF9Q16594 264 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 OR4S1Q8NGB4 309 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 SLC25A28Q96A46 364 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 UPRTQ96BW1 309 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 WDFY2Q96P53 400 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 URM1Q9BTM9 101 aaKnown RBP13.19□□□□□ -0.3
SSBP1-214ENST00000498107 TMEM59Q9BXS4 323 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 BARHL1Q9BZE3 327 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 CHST6Q9GZX3 395 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 PPA2Q9H2U2 334 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 BANF2Q9H503 90 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 OPN4Q9UHM6 478 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 NF1P21359 2839 aa13.19□□□□□ -0.3
SSBP1-214ENST00000498107 TRAV24A0A0B4J272 114 aa13.18□□□□□ -0.3
SSBP1-214ENST00000498107 SHISA3A0PJX4 238 aa13.18□□□□□ -0.3
SSBP1-214ENST00000498107 NOTOA8MTQ0 251 aa13.18□□□□□ -0.3
SSBP1-214ENST00000498107 AIPO00170 330 aa13.18□□□□□ -0.3
SSBP1-214ENST00000498107 MPIG6BO95866 241 aa13.18□□□□□ -0.3
SSBP1-214ENST00000498107 AVPP01185 164 aa13.18□□□□□ -0.3
SSBP1-214ENST00000498107 GLAP06280 429 aa13.18□□□□□ -0.3
SSBP1-214ENST00000498107 FAM157CP0CG43 387 aa13.18□□□□□ -0.3
SSBP1-214ENST00000498107 VSIG8P0DPA2 414 aa13.18□□□□□ -0.3
SSBP1-214ENST00000498107 RBM39Q14498 530 aaKnown RBP13.18□□□□□ -0.3
SSBP1-214ENST00000498107 PDCD1Q15116 288 aa13.18□□□□□ -0.3
SSBP1-214ENST00000498107 ATAD3CQ5T2N8 411 aa13.18□□□□□ -0.3
SSBP1-214ENST00000498107 TMEM104Q8NE00 496 aa13.18□□□□□ -0.3
SSBP1-214ENST00000498107 OR4M1Q8NGD0 313 aa13.18□□□□□ -0.3
SSBP1-214ENST00000498107 FAM46BQ96A09 425 aa13.18□□□□□ -0.3
SSBP1-214ENST00000498107 FAM3DQ96BQ1 224 aa13.18□□□□□ -0.3
SSBP1-214ENST00000498107 Q96M66 194 aa13.18□□□□□ -0.3
SSBP1-214ENST00000498107 PCGF1Q9BSM1 259 aa13.18□□□□□ -0.3
SSBP1-214ENST00000498107 CENPOQ9BU64 300 aa13.18□□□□□ -0.3
SSBP1-214ENST00000498107 DPCDQ9BVM2 203 aaPredicted RBP13.18□□□□□ -0.3
SSBP1-214ENST00000498107 C19orf12Q9NSK7 152 aa13.18□□□□□ -0.3
SSBP1-214ENST00000498107 TMEM14DPA8MWL7 114 aa13.17□□□□□ -0.3
SSBP1-214ENST00000498107 MCRIP1C9JLW8 97 aa13.17□□□□□ -0.3
SSBP1-214ENST00000498107 TMEM127O75204 238 aa13.17□□□□□ -0.3
SSBP1-214ENST00000498107 SDC2P34741 201 aa13.17□□□□□ -0.3
SSBP1-214ENST00000498107 OR10A3P58181 314 aa13.17□□□□□ -0.3
SSBP1-214ENST00000498107 BPIFB3P59826 476 aa13.17□□□□□ -0.3
SSBP1-214ENST00000498107 RPS27AP62979 156 aaKnown RBP13.17□□□□□ -0.3
SSBP1-214ENST00000498107 PAX5Q02548 391 aa13.17□□□□□ -0.3
SSBP1-214ENST00000498107 P2RY14Q15391 338 aa13.17□□□□□ -0.3
SSBP1-214ENST00000498107 KRBOX4Q5JUW0 171 aa13.17□□□□□ -0.3
SSBP1-214ENST00000498107 HES5Q5TA89 166 aa13.17□□□□□ -0.3
SSBP1-214ENST00000498107 TMEM200BQ69YZ2 307 aa13.17□□□□□ -0.3
SSBP1-214ENST00000498107 C1orf229Q6ZS94 237 aaPredicted RBP13.17□□□□□ -0.3
SSBP1-214ENST00000498107 IL17RELQ6ZVW7 336 aa13.17□□□□□ -0.3
SSBP1-214ENST00000498107 GPR141Q7Z602 305 aa13.17□□□□□ -0.3
SSBP1-214ENST00000498107 CROCCP3Q8IVE0 287 aa13.17□□□□□ -0.3
SSBP1-214ENST00000498107 SUMF2Q8NBJ7 301 aa13.17□□□□□ -0.3
SSBP1-214ENST00000498107 OR51D1Q8NGF3 324 aa13.17□□□□□ -0.3
SSBP1-214ENST00000498107 FUNDC2Q9BWH2 189 aa13.17□□□□□ -0.3
SSBP1-214ENST00000498107 SIRPDQ9H106 197 aa13.17□□□□□ -0.3
SSBP1-214ENST00000498107 NCOR1P1Q9H4R4 102 aa13.17□□□□□ -0.3
SSBP1-214ENST00000498107 METTL8Q9H825 291 aaKnown RBP13.17□□□□□ -0.3
SSBP1-214ENST00000498107 FBLN5Q9UBX5 448 aa13.17□□□□□ -0.3
SSBP1-214ENST00000498107 LINC00312Q9Y6C7 94 aa13.17□□□□□ -0.3
SSBP1-214ENST00000498107 TRGV10A0A0A0MS01 117 aa13.16□□□□□ -0.3
SSBP1-214ENST00000498107 MMP9P14780 707 aa13.16□□□□□ -0.3
SSBP1-214ENST00000498107 FUT3P21217 361 aa13.16□□□□□ -0.3
SSBP1-214ENST00000498107 QRFPP83859 136 aa13.16□□□□□ -0.3
SSBP1-214ENST00000498107 AESQ08117 197 aa13.16□□□□□ -0.3
SSBP1-214ENST00000498107 ATXN7L3Q14CW9 347 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms