RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 PMELP40967 661 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 CYB561P49447 251 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 THBS3P49746 956 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 FAM3AP98173 230 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 ARFRP1Q13795 201 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 RGNQ15493 299 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 FAM183BPQ6ZVS7 135 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 FAM231DQ6ZW35 169 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 S100A7AQ86SG5 101 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 LGI3Q8N145 548 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 STK40Q8N2I9 435 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 GPR32P1Q8NGA4 272 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 OR4C13Q8NGP0 309 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 OR4S2Q8NH73 311 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 C16orf78Q8WTQ4 265 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 SDHCQ99643 169 aaPredicted RBP4.57□□□□□ -1.68
BRCA1-224ENST00000497488 PITX2Q99697 317 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 SLC29A3Q9BZD2 475 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 EDA2RQ9HAV5 297 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 F11RQ9Y624 299 aaKnown RBP4.57□□□□□ -1.68
BRCA1-224ENST00000497488 A0A0G2JMZ2 1700 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 PLXNB2O15031 1838 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 TRAV8-6A0A0B4J262 113 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 A0A0J9YXV3 536 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 A0A1B0GUA9 196 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 LOC105371267A0A1B0GV96 52 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 GATBO75879 557 aaKnown RBP4.56□□□□□ -1.68
BRCA1-224ENST00000497488 TCN2P20062 427 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 PSMB9P28065 219 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 RPL12P30050 165 aaKnown RBP4.56□□□□□ -1.68
BRCA1-224ENST00000497488 CD79BP40259 229 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 P2RX1P51575 399 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 SLC25A1P53007 311 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 ARG2P78540 354 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 INCA1Q0VD86 236 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 TAF1AQ15573 450 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-224ENST00000497488 ALX1Q15699 326 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 ZNF585BQ52M93 769 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 LRRC10Q5BKY1 277 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 HHATQ5VTY9 493 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 HACD4Q5VWC8 232 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 LAMTOR1Q6IAA8 161 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 XKRXQ6PP77 449 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 ZNF493Q6ZR52 646 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 MOB1BQ7L9L4 216 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 HSD17B13Q7Z5P4 300 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-224ENST00000497488 UBAC2Q8NBM4 344 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 ANKRD9Q96BM1 317 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-224ENST00000497488 RPUSD4Q96CM3 377 aaKnown RBP4.56□□□□□ -1.68
BRCA1-224ENST00000497488 SMIM12Q96EX1 92 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 TMA16Q96EY4 203 aaKnown RBP4.56□□□□□ -1.68
BRCA1-224ENST00000497488 SMARCD1Q96GM5 515 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 METTL26Q96S19 204 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 FAAP24Q9BTP7 215 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 TLNRD1Q9H1K6 362 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 TMPRSS5Q9H3S3 457 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 PTGES2Q9H7Z7 377 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 FARSAQ9Y285 508 aaKnown RBP4.56□□□□□ -1.68
BRCA1-224ENST00000497488 ARL2BPQ9Y2Y0 163 aa4.56□□□□□ -1.68
BRCA1-224ENST00000497488 MYH8P13535 1937 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 CIB4A0PJX0 185 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 RBFOX3A6NFN3 312 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 METTL15A6NJ78 407 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 SHISA9B4DS77 424 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 STX10O60499 249 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 IGLV2-11P01706 119 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 TNNC2P02585 160 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 AMBPP02760 352 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 RAB3AP20336 220 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 GDF1P27539 372 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 PYCR1P32322 319 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 CDKN2DP55273 166 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 TCL1AP56279 114 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 TAS2R46P59540 309 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 PRDX1Q06830 199 aaKnown RBP4.55□□□□□ -1.68
BRCA1-224ENST00000497488 SPA17Q15506 151 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 COA6Q5JTJ3 125 aaKnown RBP4.55□□□□□ -1.68
BRCA1-224ENST00000497488 CASC10Q5T4H9 136 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 KDM4DQ6B0I6 523 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 UGT2A3Q6UWM9 527 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 NCCRP1Q6ZVX7 275 aaPredicted RBP4.55□□□□□ -1.68
BRCA1-224ENST00000497488 H2AFVQ71UI9 128 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 COX18Q8N8Q8 333 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 OR10G9Q8NGN4 311 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 PPCDCQ96CD2 204 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 VSIG2Q96IQ7 327 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 PGLYRP2Q96PD5 576 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 SMIM14Q96QK8 99 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 OR2M4Q96R27 311 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 LITAFQ99732 161 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 ULBP1Q9BZM6 244 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 SLCO1B3Q9NPD5 702 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 C8orf4Q9NR00 106 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 ZNF226Q9NYT6 803 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 NYAP2Q9P242 653 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 SIGLEC7Q9Y286 467 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 ARL5AQ9Y689 179 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 MGAMO43451 1857 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 PARP14Q460N5 1801 aa4.55□□□□□ -1.68
BRCA1-224ENST00000497488 CACNA1IQ9P0X4 2223 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms