RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 LINC00470Q9BZP3 86 aa2.88□□□□□ -1.95
MDM2-220ENST00000496959 RACGAP1Q9H0H5 632 aa2.88□□□□□ -1.95
MDM2-220ENST00000496959 C1orf198Q9H425 327 aa2.88□□□□□ -1.95
MDM2-220ENST00000496959 ARMC7Q9H6L4 198 aa2.88□□□□□ -1.95
MDM2-220ENST00000496959 CACYBPQ9HB71 228 aaKnown RBP2.88□□□□□ -1.95
MDM2-220ENST00000496959 C1orf109Q9NX04 203 aa2.88□□□□□ -1.95
MDM2-220ENST00000496959 TREM2Q9NZC2 230 aa2.88□□□□□ -1.95
MDM2-220ENST00000496959 RASD1Q9Y272 281 aa2.88□□□□□ -1.95
MDM2-220ENST00000496959 SNX24Q9Y343 169 aa2.88□□□□□ -1.95
MDM2-220ENST00000496959 ANK3Q12955 4377 aaKnown RBP2.88□□□□□ -1.95
MDM2-220ENST00000496959 DSPPQ9NZW4 1301 aa2.88□□□□□ -1.95
MDM2-220ENST00000496959 CLDN25C9JDP6 229 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 RPL36A-HNRNPH2H7BZ11 118 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 SCAMP2O15127 329 aaKnown RBP2.87□□□□□ -1.95
MDM2-220ENST00000496959 SSX5O60225 188 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 SEC22BO75396 215 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 LY6HO94772 140 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 MPZL1O95297 269 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 H6PDO95479 791 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 PTHP01270 115 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 CRYBA1P05813 215 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 ADRA2AP08913 450 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 SNRPAP09012 282 aaKnown RBP2.87□□□□□ -1.95
MDM2-220ENST00000496959 CECR9P0C854 216 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 UBTFL6P0CB48 400 aaPredicted RBP2.87□□□□□ -1.95
MDM2-220ENST00000496959 CBR1P16152 277 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 IGFBP3P17936 291 aaPredicted RBP2.87□□□□□ -1.95
MDM2-220ENST00000496959 PRPS1L1P21108 318 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 PTNP21246 168 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 PRTN3P24158 256 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 CCT3P49368 545 aaKnown RBP2.87□□□□□ -1.95
MDM2-220ENST00000496959 OR2B6P58173 313 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 BPIFB3P59826 476 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 COPZ1P61923 177 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 H3F3AP84243 136 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 SKP2Q13309 424 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 SNTB2Q13425 540 aaKnown RBP2.87□□□□□ -1.95
MDM2-220ENST00000496959 CHI3L2Q15782 390 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 PDZK1Q5T2W1 519 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 CCNJQ5T5M9 372 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 CBLN3Q6UW01 205 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 IGFL1Q6UW32 110 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 SYT10Q6XYQ8 523 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 C1orf174Q8IYL3 243 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 SLC35F6Q8N357 371 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 RIBC1Q8N443 379 aaPredicted RBP2.87□□□□□ -1.95
MDM2-220ENST00000496959 C15orf54Q8N8G6 183 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 NKAPP1Q8N9T2 125 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 FAM71CQ8NEG0 241 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 OR9K2Q8NGE7 335 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 OR52E4Q8NGH9 312 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 CLDND2Q8NHS1 167 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 CHCHD10Q8WYQ3 142 aaPredicted RBP2.87□□□□□ -1.95
MDM2-220ENST00000496959 OR5P2Q8WZ92 322 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 CDS1Q92903 461 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 RAB1CQ92928 201 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 TRIM44Q96DX7 344 aaPredicted RBP2.87□□□□□ -1.95
MDM2-220ENST00000496959 FCRL1Q96LA6 429 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 PPP3R2Q96LZ3 170 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 KCNA7Q96RP8 456 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 DOK1Q99704 481 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 DPH5Q9H2P9 285 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 RDH8Q9NYR8 311 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 SLC7A8Q9UHI5 535 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 ATP6V1HQ9UI12 483 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 POLR3HQ9Y535 204 aaPredicted RBP2.87□□□□□ -1.95
MDM2-220ENST00000496959 WNK1Q9H4A3 2382 aa2.87□□□□□ -1.95
MDM2-220ENST00000496959 CUBNO60494 3623 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 IGHV2OR16-5A0A0B4J2B6 119 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 A0A0G2JRQ6 117 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 EXOC1LA0A1B0GW35 172 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 ZNF99A8MXY4 864 aaPredicted RBP2.86□□□□□ -1.95
MDM2-220ENST00000496959 C9JVG2 144 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 KRTAP4-16G5E9R7 235 aaPredicted RBP2.86□□□□□ -1.95
MDM2-220ENST00000496959 H3BSA7 217 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 OR2T1O43869 369 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 MGRN1O60291 552 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 SPAG7O75391 227 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 ERLIN1O75477 346 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 PIAS1O75925 651 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 UBL3O95164 117 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 RAB36O95755 333 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 IGKV1-17P01599 117 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 GIPP09681 153 aaPredicted RBP2.86□□□□□ -1.95
MDM2-220ENST00000496959 PPIAL4GP0DN37 164 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 MYL2P10916 166 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 ZNF43P17038 809 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 CALB2P22676 271 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 CXCR1P25024 350 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 GLRXP35754 106 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 DNAJB13P59910 316 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 LRRC74AQ0VAA2 488 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 ATXN7L3Q14CW9 347 aaPredicted RBP2.86□□□□□ -1.95
MDM2-220ENST00000496959 TRIP10Q15642 601 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 TOMM34Q15785 309 aaPredicted RBP2.86□□□□□ -1.95
MDM2-220ENST00000496959 LY6EQ16553 131 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 ARHGAP11BQ3KRB8 267 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 CCDC153Q494R4 210 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 TIGITQ495A1 244 aa2.86□□□□□ -1.95
MDM2-220ENST00000496959 ATP6AP1LQ52LC2 224 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms