RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 IDH3GP51553 393 aaPredicted RBP2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 RAP1GDS1P52306 607 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 AP2S1P53680 142 aaPredicted RBP2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 SNRPD1P62314 119 aaKnown RBP2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 FAM3AP98173 230 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 ZNF763Q0D2J5 394 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 SLC10A1Q14973 349 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 SLC9A3R2Q15599 337 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 PRSS8Q16651 343 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 CEACAM21Q3KPI0 293 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 SPIN3Q5JUX0 258 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 SLC35E4Q6ICL7 350 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 OR2T5Q6IEZ7 315 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 FAM53AQ6NSI3 398 aaPredicted RBP2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 GDPGP1Q6ZNW5 385 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 NOTCH2NLQ7Z3S9 236 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 ZNF571Q7Z3V5 609 aaPredicted RBP2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 SKA3Q8IX90 412 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 RIMKLAQ8IXN7 391 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 KLHDC8BQ8IXV7 354 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 ZADH2Q8N4Q0 377 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 METTL13Q8N6R0 699 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 OR1M1Q8NGA1 313 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 OR4F15Q8NGB8 312 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 OR4K17Q8NGC6 315 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 OR2T29Q8NH02 315 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 ZNF519Q8TB69 540 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 FAM45AQ8TCE6 357 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 NEK7Q8TDX7 302 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 CASTOR1Q8WTX7 329 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 RAB8BQ92930 207 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 TMEM230Q96A57 120 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 NTAN1Q96AB6 310 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 TESCQ96BS2 214 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 RBP7Q96R05 134 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 P2RX4Q99571 388 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 ARV1Q9H2C2 271 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 PARLQ9H300 379 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 RPF2Q9H7B2 306 aaKnown RBP2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 ZNF442Q9H7R0 627 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 AMBNQ9NP70 447 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 SLC2A9Q9NRM0 540 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 PLCXD1Q9NUJ7 323 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 EXD2Q9NVH0 621 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 GID8Q9NWU2 228 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 TP53TG1Q9Y2A0 90 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 ZNF257Q9Y2Q1 563 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 ALG5Q9Y673 324 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 STAB2Q8WWQ8 2551 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 PMS2P5A8MQ11 134 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 K7N7A8 449 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 TNFRSF11BO00300 401 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 GLSO94925 669 aaPredicted RBP2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 RENP00797 406 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 IFNA14P01570 189 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 EIF4EP06730 217 aaKnown RBP2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 GNAO1P09471 354 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 H2AFZP0C0S5 128 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 HIST1H1EP10412 219 aaKnown RBP2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 LAMP1P11279 417 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 CBR1P16152 277 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 AQP1P29972 269 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 IL2RGP31785 369 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 PFN2P35080 140 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 RPA3P35244 121 aaPredicted RBP2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 MYCNOSP40205 109 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 PMELP40967 661 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 PPICP45877 212 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 TMEM33P57088 247 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 OR4D2P58180 307 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 SLC35A1P78382 337 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 IL5RAQ01344 420 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 ZNF266Q14584 549 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 LTB4RQ15722 352 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 ATP6AP1Q15904 470 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 MICAQ29983 383 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 C11orf71Q6IPW1 123 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 LRRN1Q6UXK5 716 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 Q6ZTC4 211 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 FAM19A5Q7Z5A7 132 aaPredicted RBP2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 THOC6Q86W42 341 aaKnown RBP2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 C10orf107Q8IVU9 208 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 SLC30A8Q8IWU4 369 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 CPNE9Q8IYJ1 553 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 AQP11Q8NBQ7 271 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 OR13G1Q8NGZ3 307 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 HAVCR2Q8TDQ0 301 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 ANKRD9Q96BM1 317 aaPredicted RBP2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 MRAP2Q96G30 205 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 SNF8Q96H20 258 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 FAM19A4Q96LR4 140 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 SDHCQ99643 169 aaPredicted RBP2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 HOPXQ9BPY8 73 aaPredicted RBP2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 UBXN6Q9BZV1 441 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 SELENOIQ9C0D9 397 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 COA1Q9GZY4 146 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 SPANXB1Q9NS25 103 aaPredicted RBP2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 TAS2R7Q9NYW3 318 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 XCL2Q9UBD3 114 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms