RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 ITLN1Q8WWA0 313 aa14.29□□□□□ -0.12
LMNA-216ENST00000496738 MRPS24Q96EL2 167 aaKnown RBP14.29□□□□□ -0.12
LMNA-216ENST00000496738 NUDT16L1Q9BRJ7 211 aaKnown RBP14.29□□□□□ -0.12
LMNA-216ENST00000496738 FAAP24Q9BTP7 215 aa14.29□□□□□ -0.12
LMNA-216ENST00000496738 MTFP1Q9UDX5 166 aa14.29□□□□□ -0.12
LMNA-216ENST00000496738 RAB14P61106 215 aa14.29□□□□□ -0.12
LMNA-216ENST00000496738 GRK1Q15835 563 aa14.29□□□□□ -0.12
LMNA-216ENST00000496738 SFRP4Q6FHJ7 346 aaPredicted RBP14.29□□□□□ -0.12
LMNA-216ENST00000496738 TEX261Q6UWH6 196 aa14.29□□□□□ -0.12
LMNA-216ENST00000496738 DNM1P46Q6ZS02 220 aa14.29□□□□□ -0.12
LMNA-216ENST00000496738 WDR13Q9H1Z4 485 aa14.29□□□□□ -0.12
LMNA-216ENST00000496738 CISD1Q9NZ45 108 aaKnown RBP14.29□□□□□ -0.12
LMNA-216ENST00000496738 TREM2Q9NZC2 230 aa14.29□□□□□ -0.12
LMNA-216ENST00000496738 U3KQ87 197 aa14.29□□□□□ -0.12
LMNA-216ENST00000496738 FAM240BA0A1B0GVZ2 78 aa14.28□□□□□ -0.12
LMNA-216ENST00000496738 HSPB6O14558 160 aa14.28□□□□□ -0.12
LMNA-216ENST00000496738 GLAP06280 429 aa14.28□□□□□ -0.12
LMNA-216ENST00000496738 HACD4Q5VWC8 232 aa14.28□□□□□ -0.12
LMNA-216ENST00000496738 WDR82Q6UXN9 313 aa14.28□□□□□ -0.12
LMNA-216ENST00000496738 Q8NFD4 153 aa14.28□□□□□ -0.12
LMNA-216ENST00000496738 MEGF10Q96KG7 1140 aa14.28□□□□□ -0.12
LMNA-216ENST00000496738 SULT4A1Q9BR01 284 aa14.28□□□□□ -0.12
LMNA-216ENST00000496738 HDHD3Q9BSH5 251 aaPredicted RBP14.28□□□□□ -0.12
LMNA-216ENST00000496738 PLCE1Q9P212 2302 aa14.28□□□□□ -0.12
LMNA-216ENST00000496738 NXPH2O95156 264 aa14.27□□□□□ -0.12
LMNA-216ENST00000496738 PGA5P0DJD9 388 aa14.27□□□□□ -0.12
LMNA-216ENST00000496738 LOXP28300 417 aaPredicted RBP14.27□□□□□ -0.12
LMNA-216ENST00000496738 CD200P41217 278 aa14.27□□□□□ -0.12
LMNA-216ENST00000496738 TNFAIP6P98066 277 aaPredicted RBP14.27□□□□□ -0.12
LMNA-216ENST00000496738 MOGAT3Q86VF5 341 aa14.27□□□□□ -0.12
LMNA-216ENST00000496738 RBPMSQ93062 196 aaKnown RBP14.27□□□□□ -0.12
LMNA-216ENST00000496738 NRIP2Q9BQI9 281 aa14.27□□□□□ -0.12
LMNA-216ENST00000496738 NLKQ9UBE8 527 aa14.27□□□□□ -0.12
LMNA-216ENST00000496738 UBE2QL1A1L167 161 aa14.27□□□□□ -0.13
LMNA-216ENST00000496738 MELTFP08582 738 aa14.27□□□□□ -0.13
LMNA-216ENST00000496738 GSTP1P09211 210 aaKnown RBP14.27□□□□□ -0.13
LMNA-216ENST00000496738 CHATP28329 748 aa14.27□□□□□ -0.13
LMNA-216ENST00000496738 BOLLQ8N9W6 283 aaKnown RBP14.27□□□□□ -0.13
LMNA-216ENST00000496738 CLRN3Q8NCR9 226 aa14.27□□□□□ -0.13
LMNA-216ENST00000496738 OR4S1Q8NGB4 309 aa14.27□□□□□ -0.13
LMNA-216ENST00000496738 SVIPQ8NHG7 77 aa14.27□□□□□ -0.13
LMNA-216ENST00000496738 MAFIPQ8WZ33 124 aa14.27□□□□□ -0.13
LMNA-216ENST00000496738 TLNRD1Q9H1K6 362 aa14.27□□□□□ -0.13
LMNA-216ENST00000496738 RPS10-NUDT3A0A1W2PQS6 291 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 ANKRD20A5PA0PJZ0 165 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 HLA-DMAP28067 261 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 ERVK11-1P61568 191 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 CCL8P80075 99 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 MZT1Q08AG7 82 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 CLLU1Q5K131 121 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 OR52W1Q6IF63 320 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 LRRC29Q8WV35 223 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 ZNF230Q9UIE0 474 aaPredicted RBP14.26□□□□□ -0.13
LMNA-216ENST00000496738 ICE1Q9Y2F5 2266 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 FAM221AA4D161 298 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 VSTM5A8MXK1 200 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 M0R233 179 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 TFF1P04155 84 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 CEBPDP49716 269 aaPredicted RBP14.26□□□□□ -0.13
LMNA-216ENST00000496738 RAB13P51153 203 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 PLET1Q6UQ28 207 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 POC1AQ8NBT0 407 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 TMEM68Q96MH6 324 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 HRASLSQ9HDD0 168 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 GSN-AS1Q9NRJ2 163 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 MCUBQ9NWR8 336 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 AK3Q9UIJ7 227 aa14.26□□□□□ -0.13
LMNA-216ENST00000496738 ANKHD1Q8IWZ3 2542 aaKnown RBP14.26□□□□□ -0.13
LMNA-216ENST00000496738 CHD3Q12873 2000 aaKnown RBP14.25□□□□□ -0.13
LMNA-216ENST00000496738 A0A0A6YYJ9 748 aa14.25□□□□□ -0.13
LMNA-216ENST00000496738 DBX1A6NMT0 343 aa14.25□□□□□ -0.13
LMNA-216ENST00000496738 SULT1C2O00338 296 aa14.25□□□□□ -0.13
LMNA-216ENST00000496738 PDCD6O75340 191 aa14.25□□□□□ -0.13
LMNA-216ENST00000496738 CD3DP04234 171 aa14.25□□□□□ -0.13
LMNA-216ENST00000496738 APOBEC3AP31941 199 aaPredicted RBP14.25□□□□□ -0.13
LMNA-216ENST00000496738 BTCP35070 178 aa14.25□□□□□ -0.13
LMNA-216ENST00000496738 BPIFB2Q8N4F0 458 aa14.25□□□□□ -0.13
LMNA-216ENST00000496738 OR14J1Q9UGF5 321 aa14.25□□□□□ -0.13
LMNA-216ENST00000496738 ZDHHC8Q9ULC8 765 aa14.25□□□□□ -0.13
LMNA-216ENST00000496738 HS3ST1O14792 307 aa14.25□□□□□ -0.13
LMNA-216ENST00000496738 CSF1P09603 554 aa14.25□□□□□ -0.13
LMNA-216ENST00000496738 EGR1P18146 543 aa14.25□□□□□ -0.13
LMNA-216ENST00000496738 PMELP40967 661 aa14.25□□□□□ -0.13
LMNA-216ENST00000496738 CCR6P51684 374 aa14.25□□□□□ -0.13
LMNA-216ENST00000496738 ACTBP60709 375 aa14.25□□□□□ -0.13
LMNA-216ENST00000496738 ACTG1P63261 375 aa14.25□□□□□ -0.13
LMNA-216ENST00000496738 ZNF672Q499Z4 452 aaPredicted RBP14.25□□□□□ -0.13
LMNA-216ENST00000496738 DYNLRB1Q9NP97 96 aa14.25□□□□□ -0.13
LMNA-216ENST00000496738 ZNF462Q96JM2 2506 aa14.25□□□□□ -0.13
LMNA-216ENST00000496738 C17orf100A8MU93 164 aa14.24□□□□□ -0.13
LMNA-216ENST00000496738 M0QYG6 137 aa14.24□□□□□ -0.13
LMNA-216ENST00000496738 ZNF44P15621 663 aa14.24□□□□□ -0.13
LMNA-216ENST00000496738 FUT3P21217 361 aa14.24□□□□□ -0.13
LMNA-216ENST00000496738 GLRA1P23415 457 aa14.24□□□□□ -0.13
LMNA-216ENST00000496738 AP3S2P59780 193 aa14.24□□□□□ -0.13
LMNA-216ENST00000496738 PNLIPRP3Q17RR3 467 aa14.24□□□□□ -0.13
LMNA-216ENST00000496738 NHLRC3Q5JS37 347 aa14.24□□□□□ -0.13
LMNA-216ENST00000496738 TGIF2LYQ8IUE0 185 aa14.24□□□□□ -0.13
LMNA-216ENST00000496738 Q8IYB0 196 aa14.24□□□□□ -0.13
LMNA-216ENST00000496738 RDH5Q92781 318 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms