RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 PLSCR2Q9NRY7 297 aa11.16□□□□□ -0.62
GARNL3-220ENST00000496711 KIR2DS1A0A191URI9 304 aa11.15□□□□□ -0.62
GARNL3-220ENST00000496711 ZSCAN5BA6NJL1 495 aa11.15□□□□□ -0.62
GARNL3-220ENST00000496711 AQP7O14520 342 aa11.15□□□□□ -0.62
GARNL3-220ENST00000496711 HSPB6O14558 160 aa11.15□□□□□ -0.62
GARNL3-220ENST00000496711 SMPD2O60906 423 aa11.15□□□□□ -0.62
GARNL3-220ENST00000496711 DEDDO75618 318 aa11.15□□□□□ -0.62
GARNL3-220ENST00000496711 M6PRP20645 277 aa11.15□□□□□ -0.62
GARNL3-220ENST00000496711 CA6P23280 308 aa11.15□□□□□ -0.62
GARNL3-220ENST00000496711 KIR2DS4P43632 304 aa11.15□□□□□ -0.62
GARNL3-220ENST00000496711 KIR2DS1Q14954 304 aa11.15□□□□□ -0.62
GARNL3-220ENST00000496711 SP6Q3SY56 376 aa11.15□□□□□ -0.62
GARNL3-220ENST00000496711 ZNF585AQ6P3V2 769 aa11.15□□□□□ -0.62
GARNL3-220ENST00000496711 FBXW12Q6X9E4 464 aa11.15□□□□□ -0.62
GARNL3-220ENST00000496711 FAM214BQ7L5A3 538 aa11.15□□□□□ -0.62
GARNL3-220ENST00000496711 MYPOPQ86VE0 399 aaPredicted RBP11.15□□□□□ -0.62
GARNL3-220ENST00000496711 FAM185AQ8N0U4 392 aa11.15□□□□□ -0.62
GARNL3-220ENST00000496711 OR11L1Q8NGX0 322 aa11.15□□□□□ -0.62
GARNL3-220ENST00000496711 CDH20Q9HBT6 801 aa11.15□□□□□ -0.62
GARNL3-220ENST00000496711 LHX6Q9UPM6 363 aa11.15□□□□□ -0.62
GARNL3-220ENST00000496711 J3QT63 122 aa11.15□□□□□ -0.63
GARNL3-220ENST00000496711 LGALS8O00214 317 aa11.15□□□□□ -0.63
GARNL3-220ENST00000496711 FGF16O43320 207 aa11.15□□□□□ -0.63
GARNL3-220ENST00000496711 DIRAS3O95661 229 aa11.15□□□□□ -0.63
GARNL3-220ENST00000496711 CELA3BP08861 270 aa11.15□□□□□ -0.63
GARNL3-220ENST00000496711 IDH3GP51553 393 aaPredicted RBP11.15□□□□□ -0.63
GARNL3-220ENST00000496711 GUSBP1Q15486 140 aa11.15□□□□□ -0.63
GARNL3-220ENST00000496711 LGI3Q8N145 548 aa11.15□□□□□ -0.63
GARNL3-220ENST00000496711 SUMF2Q8NBJ7 301 aa11.15□□□□□ -0.63
GARNL3-220ENST00000496711 GTF3AQ92664 365 aaKnown RBP11.15□□□□□ -0.63
GARNL3-220ENST00000496711 C18orf12Q96KH6 178 aa11.15□□□□□ -0.63
GARNL3-220ENST00000496711 ZNF488Q96MN9 340 aa11.15□□□□□ -0.63
GARNL3-220ENST00000496711 RTL8AQ9BWD3 113 aa11.15□□□□□ -0.63
GARNL3-220ENST00000496711 OR51I2Q9H344 312 aa11.15□□□□□ -0.63
GARNL3-220ENST00000496711 FBXO9Q9UK97 447 aaPredicted RBP11.15□□□□□ -0.63
GARNL3-220ENST00000496711 CACNA1GO43497 2377 aa11.15□□□□□ -0.63
GARNL3-220ENST00000496711 B8ZZF3 427 aa11.14□□□□□ -0.63
GARNL3-220ENST00000496711 H7C1Q1 480 aa11.14□□□□□ -0.63
GARNL3-220ENST00000496711 TAAR5O14804 337 aa11.14□□□□□ -0.63
GARNL3-220ENST00000496711 PHF1O43189 567 aaPredicted RBP11.14□□□□□ -0.63
GARNL3-220ENST00000496711 LYZL6O75951 148 aa11.14□□□□□ -0.63
GARNL3-220ENST00000496711 SCGB1D2O95969 90 aa11.14□□□□□ -0.63
GARNL3-220ENST00000496711 TK1P04183 234 aa11.14□□□□□ -0.63
GARNL3-220ENST00000496711 HKR1P10072 659 aa11.14□□□□□ -0.63
GARNL3-220ENST00000496711 IL32P24001 234 aa11.14□□□□□ -0.63
GARNL3-220ENST00000496711 DUSP1P28562 367 aa11.14□□□□□ -0.63
GARNL3-220ENST00000496711 PPP1CBP62140 327 aa11.14□□□□□ -0.63
GARNL3-220ENST00000496711 TSC22D1Q15714 1073 aa11.14□□□□□ -0.63
GARNL3-220ENST00000496711 Q6ZT83 130 aa11.14□□□□□ -0.63
GARNL3-220ENST00000496711 FAM58AQ8N1B3 248 aa11.14□□□□□ -0.63
GARNL3-220ENST00000496711 GALNT11Q8NCW6 608 aa11.14□□□□□ -0.63
GARNL3-220ENST00000496711 MSI2Q96DH6 328 aaKnown RBP11.14□□□□□ -0.63
GARNL3-220ENST00000496711 RIMS4Q9H426 269 aaPredicted RBP11.14□□□□□ -0.63
GARNL3-220ENST00000496711 RHOFQ9HBH0 211 aa11.14□□□□□ -0.63
GARNL3-220ENST00000496711 ZC4H2Q9NQZ6 224 aa11.14□□□□□ -0.63
GARNL3-220ENST00000496711 TAS2R3Q9NYW6 316 aa11.14□□□□□ -0.63
GARNL3-220ENST00000496711 LSM5Q9Y4Y9 91 aaKnown RBP11.14□□□□□ -0.63
GARNL3-220ENST00000496711 A0A1W2PR80 420 aa11.13□□□□□ -0.63
GARNL3-220ENST00000496711 TRDCB7Z8K6 153 aa11.13□□□□□ -0.63
GARNL3-220ENST00000496711 K7EPK0 472 aa11.13□□□□□ -0.63
GARNL3-220ENST00000496711 CNOT4O95628 575 aaKnown RBP11.13□□□□□ -0.63
GARNL3-220ENST00000496711 SCTP09683 121 aa11.13□□□□□ -0.63
GARNL3-220ENST00000496711 SPINK2P20155 84 aa11.13□□□□□ -0.63
GARNL3-220ENST00000496711 EIF5AP63241 154 aaKnown RBP11.13□□□□□ -0.63
GARNL3-220ENST00000496711 SRPXP78539 464 aa11.13□□□□□ -0.63
GARNL3-220ENST00000496711 GABRA6Q16445 453 aa11.13□□□□□ -0.63
GARNL3-220ENST00000496711 TUSC1Q2TAM9 212 aa11.13□□□□□ -0.63
GARNL3-220ENST00000496711 INO80CQ6PI98 192 aaPredicted RBP11.13□□□□□ -0.63
GARNL3-220ENST00000496711 LYZL2Q7Z4W2 148 aa11.13□□□□□ -0.63
GARNL3-220ENST00000496711 FAM71E2Q8N5Q1 922 aa11.13□□□□□ -0.63
GARNL3-220ENST00000496711 MRPL30Q8TCC3 161 aaKnown RBP11.13□□□□□ -0.63
GARNL3-220ENST00000496711 GLYATL2Q8WU03 294 aa11.13□□□□□ -0.63
GARNL3-220ENST00000496711 RNF141Q8WVD5 230 aa11.13□□□□□ -0.63
GARNL3-220ENST00000496711 TMED6Q8WW62 240 aa11.13□□□□□ -0.63
GARNL3-220ENST00000496711 SARAFQ96BY9 339 aa11.13□□□□□ -0.63
GARNL3-220ENST00000496711 PRRX2Q99811 253 aa11.13□□□□□ -0.63
GARNL3-220ENST00000496711 IFT22Q9H7X7 185 aa11.13□□□□□ -0.63
GARNL3-220ENST00000496711 ASF1BQ9NVP2 202 aa11.13□□□□□ -0.63
GARNL3-220ENST00000496711 ATP23Q9Y6H3 246 aa11.13□□□□□ -0.63
GARNL3-220ENST00000496711 TRBV6-6A0A0A6YYG2 114 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 C3orf85A0A1B0GTC6 90 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 LRP5LA4QPB2 252 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 BET1O15155 118 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 GLAP06280 429 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 CTXN2P0C2S0 81 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 RPL12P30050 165 aaKnown RBP11.12□□□□□ -0.63
GARNL3-220ENST00000496711 HERPUD1Q15011 391 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 C17orf78Q8N4C9 275 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 CNEP1R1Q8N9A8 125 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 ZNF565Q8N9K5 539 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 SPERTQ8NA61 448 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 TP53RKQ96S44 253 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 OR2J1Q9GZK6 312 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 PIGMQ9H3S5 423 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 OR2S2Q9NQN1 319 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 ZFP57Q9NU63 452 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 TMEM100Q9NV29 134 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 PCDHB10Q9UN67 800 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 TRAV24A0A0B4J272 114 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 MPPED1O15442 326 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms