RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 C11orf91Q3C1V1 193 aa18.08■□□□□ 0.48
C9orf3-222ENST00000496567 UBE2NLQ5JXB2 153 aa18.08■□□□□ 0.48
C9orf3-222ENST00000496567 SAMD12Q8N8I0 201 aa18.08■□□□□ 0.48
C9orf3-222ENST00000496567 SUMF2Q8NBJ7 301 aa18.08■□□□□ 0.48
C9orf3-222ENST00000496567 ST8SIA4Q92187 359 aa18.08■□□□□ 0.48
C9orf3-222ENST00000496567 PHF21AQ96BD5 680 aa18.08■□□□□ 0.48
C9orf3-222ENST00000496567 SLIRPQ9GZT3 109 aaKnown RBP18.08■□□□□ 0.48
C9orf3-222ENST00000496567 SHARPINQ9H0F6 387 aa18.08■□□□□ 0.48
C9orf3-222ENST00000496567 RCC2Q9P258 522 aaKnown RBP18.08■□□□□ 0.48
C9orf3-222ENST00000496567 PEX16Q9Y5Y5 336 aa18.08■□□□□ 0.48
C9orf3-222ENST00000496567 A0A0A6YYD4 124 aa18.07■□□□□ 0.48
C9orf3-222ENST00000496567 MCRIP1C9JLW8 97 aa18.07■□□□□ 0.48
C9orf3-222ENST00000496567 FOXH1O75593 365 aa18.07■□□□□ 0.48
C9orf3-222ENST00000496567 GLAP06280 429 aa18.07■□□□□ 0.48
C9orf3-222ENST00000496567 NDUFB7P17568 137 aa18.07■□□□□ 0.48
C9orf3-222ENST00000496567 KCNJ3P48549 501 aa18.07■□□□□ 0.48
C9orf3-222ENST00000496567 SEC61A1P61619 476 aaKnown RBP18.07■□□□□ 0.48
C9orf3-222ENST00000496567 RBM39Q14498 530 aaKnown RBP18.07■□□□□ 0.48
C9orf3-222ENST00000496567 GRK1Q15835 563 aa18.07■□□□□ 0.48
C9orf3-222ENST00000496567 SIGIRRQ6IA17 410 aa18.07■□□□□ 0.48
C9orf3-222ENST00000496567 RAB12Q6IQ22 244 aa18.07■□□□□ 0.48
C9orf3-222ENST00000496567 METAP1DQ6UB28 335 aaPredicted RBP18.07■□□□□ 0.48
C9orf3-222ENST00000496567 RAB40AQ8WXH6 277 aa18.07■□□□□ 0.48
C9orf3-222ENST00000496567 SLC25A38Q96DW6 304 aa18.07■□□□□ 0.48
C9orf3-222ENST00000496567 DPCDQ9BVM2 203 aaPredicted RBP18.07■□□□□ 0.48
C9orf3-222ENST00000496567 CHST6Q9GZX3 395 aa18.07■□□□□ 0.48
C9orf3-222ENST00000496567 ABCG5Q9H222 651 aa18.07■□□□□ 0.48
C9orf3-222ENST00000496567 ZNF581Q9P0T4 197 aa18.07■□□□□ 0.48
C9orf3-222ENST00000496567 A0A075B6Q4 140 aa18.06■□□□□ 0.48
C9orf3-222ENST00000496567 MGST3O14880 152 aa18.06■□□□□ 0.48
C9orf3-222ENST00000496567 SOCS1O15524 211 aa18.06■□□□□ 0.48
C9orf3-222ENST00000496567 OR3A1P47881 315 aa18.06■□□□□ 0.48
C9orf3-222ENST00000496567 CD276Q5ZPR3 534 aa18.06■□□□□ 0.48
C9orf3-222ENST00000496567 GDPD3Q7L5L3 318 aa18.06■□□□□ 0.48
C9orf3-222ENST00000496567 MAPK1IP1LQ8NDC0 245 aa18.06■□□□□ 0.48
C9orf3-222ENST00000496567 OR4S1Q8NGB4 309 aa18.06■□□□□ 0.48
C9orf3-222ENST00000496567 OR10R2Q8NGX6 335 aa18.06■□□□□ 0.48
C9orf3-222ENST00000496567 PPA2Q9H2U2 334 aa18.06■□□□□ 0.48
C9orf3-222ENST00000496567 PLEKHJ1Q9NW61 149 aa18.06■□□□□ 0.48
C9orf3-222ENST00000496567 A8MXK9 166 aa18.05■□□□□ 0.48
C9orf3-222ENST00000496567 HSPB6O14558 160 aa18.05■□□□□ 0.48
C9orf3-222ENST00000496567 ECDO95905 644 aaPredicted RBP18.05■□□□□ 0.48
C9orf3-222ENST00000496567 CSN2P05814 226 aa18.05■□□□□ 0.48
C9orf3-222ENST00000496567 CHATP28329 748 aa18.05■□□□□ 0.48
C9orf3-222ENST00000496567 NKAPLQ5M9Q1 402 aa18.05■□□□□ 0.48
C9orf3-222ENST00000496567 Q6ZTK2 550 aa18.05■□□□□ 0.48
C9orf3-222ENST00000496567 MCFD2Q8NI22 146 aa18.05■□□□□ 0.48
C9orf3-222ENST00000496567 S100A16Q96FQ6 103 aaKnown RBP18.05■□□□□ 0.48
C9orf3-222ENST00000496567 C1orf159Q96HA4 380 aa18.05■□□□□ 0.48
C9orf3-222ENST00000496567 HSF4Q9ULV5 492 aa18.05■□□□□ 0.48
C9orf3-222ENST00000496567 ITPR3Q14573 2671 aa18.05■□□□□ 0.48
C9orf3-222ENST00000496567 A0A0A6YYH2 397 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 FUOMA2VDF0 154 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 A6NJ64 397 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 FOXI3A8MTJ6 420 aaPredicted RBP18.04■□□□□ 0.48
C9orf3-222ENST00000496567 B4DSR2 109 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 FAM157AC9JC47 383 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 RAB27BO00194 218 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 PHF1O43189 567 aaPredicted RBP18.04■□□□□ 0.48
C9orf3-222ENST00000496567 FCN3O75636 299 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 APOA1P02647 267 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 TMEM249Q2WGJ8 235 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 BIVMQ86UB2 503 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 CMTM4Q8IZR5 234 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 CIARTQ8N365 385 aaPredicted RBP18.04■□□□□ 0.48
C9orf3-222ENST00000496567 BPIFB2Q8N4F0 458 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 NEK7Q8TDX7 302 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 RAB3CQ96E17 227 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 NUDT16L1Q9BRJ7 211 aaKnown RBP18.04■□□□□ 0.48
C9orf3-222ENST00000496567 DIABLOQ9NR28 239 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 RGS5O15539 181 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 GZMKP49863 264 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 TMEM50BP56557 158 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 ARL6IP1Q15041 203 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 BRICD5Q6PL45 260 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 FGFRL1Q8N441 504 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 H1FXQ92522 213 aaKnown RBP18.04■□□□□ 0.48
C9orf3-222ENST00000496567 COX4I2Q96KJ9 171 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 C6orf62Q9GZU0 229 aaPredicted RBP18.04■□□□□ 0.48
C9orf3-222ENST00000496567 NXF2Q9GZY0 626 aaKnown RBP18.04■□□□□ 0.48
C9orf3-222ENST00000496567 POLR3KQ9Y2Y1 108 aaPredicted RBP18.04■□□□□ 0.48
C9orf3-222ENST00000496567 A3GALT2U3KPV4 340 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 TEX15Q9BXT5 2789 aa18.04■□□□□ 0.48
C9orf3-222ENST00000496567 OTOGQ6ZRI0 2925 aa18.03■□□□□ 0.48
C9orf3-222ENST00000496567 LOC105371242A0A075B767 164 aa18.03■□□□□ 0.48
C9orf3-222ENST00000496567 SMAD7O15105 426 aaKnown RBP18.03■□□□□ 0.48
C9orf3-222ENST00000496567 HPGDSO60760 199 aa18.03■□□□□ 0.48
C9orf3-222ENST00000496567 CR1P17927 2039 aa18.03■□□□□ 0.48
C9orf3-222ENST00000496567 ZFP36P26651 326 aaKnown RBP18.03■□□□□ 0.48
C9orf3-222ENST00000496567 ERP29P30040 261 aaKnown RBP18.03■□□□□ 0.48
C9orf3-222ENST00000496567 LCN2P80188 198 aa18.03■□□□□ 0.48
C9orf3-222ENST00000496567 ATXN7L3Q14CW9 347 aaPredicted RBP18.03■□□□□ 0.48
C9orf3-222ENST00000496567 MOGAT2Q3SYC2 334 aa18.03■□□□□ 0.48
C9orf3-222ENST00000496567 BTN2A1Q7KYR7 527 aa18.03■□□□□ 0.48
C9orf3-222ENST00000496567 C6orf201Q7Z4U5 140 aa18.03■□□□□ 0.48
C9orf3-222ENST00000496567 LINC01356Q8N9X3 169 aa18.03■□□□□ 0.48
C9orf3-222ENST00000496567 ARHGAP5-AS1Q96IT6 56 aa18.03■□□□□ 0.48
C9orf3-222ENST00000496567 MMP27Q9H306 513 aa18.03■□□□□ 0.48
C9orf3-222ENST00000496567 ADAM30Q9UKF2 790 aa18.03■□□□□ 0.48
C9orf3-222ENST00000496567 DOCK11Q5JSL3 2073 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms