RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 NSDHLQ15738 373 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 ZNF181Q2M3W8 571 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 TMEM249Q2WGJ8 235 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 PARP15Q460N3 678 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 PAGE3Q5JUK9 113 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 RNF165Q6ZSG1 346 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 FAM19A1Q7Z5A9 133 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 TMEM135Q86UB9 458 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 NT5DC3Q86UY8 548 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 FAM71E2Q8N5Q1 922 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 Q8N9W7 124 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 WDR31Q8NA23 367 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 C19orf18Q8NEA5 215 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 RNASE11Q8TAA1 199 aaKnown RBP3.37□□□□□ -1.87
SF3B1-212ENST00000496458 ZFAND1Q8TCF1 268 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 NDRG1Q92597 394 aaKnown RBP3.37□□□□□ -1.87
SF3B1-212ENST00000496458 SGTBQ96EQ0 304 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 MRPL48Q96GC5 212 aaKnown RBP3.37□□□□□ -1.87
SF3B1-212ENST00000496458 DCUN1D1Q96GG9 259 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 ZNF681Q96N22 645 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 GPR21Q99679 349 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 TCEAL7Q9BRU2 100 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 ING2Q9H160 280 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 HRASLSQ9HDD0 168 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 BIN3Q9NQY0 253 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 FBXO8Q9NRD0 319 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 BTNL2Q9UIR0 455 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 MMP17Q9ULZ9 603 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 TFR2Q9UP52 801 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 POLR3HQ9Y535 204 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-212ENST00000496458 SLC22A7Q9Y694 548 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 MAST2Q6P0Q8 1798 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 ATAD5Q96QE3 1844 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 MYO9BQ13459 2157 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 PTPRFP10586 1907 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 ZNFX1Q9P2E3 1918 aaKnown RBP3.36□□□□□ -1.87
SF3B1-212ENST00000496458 C2orf16Q68DN1 1984 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 SIPA1L1O43166 1804 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 A0A0B4J2E0 115 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 CCL15-CCL14A0A0B4J2E2 113 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 A0A0D9SFI3 127 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 A0A1B0GX12 115 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 FAM166BA8MTA8 275 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 BTNL10A8MVZ5 291 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 J3QRK9 145 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 SLC16A4O15374 487 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 ZNF780AO75290 641 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-212ENST00000496458 VAMP5O95183 116 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 RAB3DO95716 219 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 IFNA5P01569 189 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 IFNGP01579 166 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 FBP1P09467 338 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 COX4I1P13073 169 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 CBR1P16152 277 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 ZNF30P17039 623 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 GNRHRP30968 328 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 CD79BP40259 229 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 KIR3DL2P43630 455 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 PSMD8P48556 350 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 HCCSP53701 268 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 BIDP55957 195 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 INCA1Q0VD86 236 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 ST3GAL4Q11206 333 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 ARL6IP1Q15041 203 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 TRIP13Q15645 432 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-212ENST00000496458 CCL15Q16663 113 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 NSUN5P1Q3KNT7 163 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 KLF17Q5JT82 389 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-212ENST00000496458 DCUN1D2Q6PH85 259 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 Q6ZT83 130 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 ACOT7LQ6ZUV0 252 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 TMEM150AQ86TG1 271 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 PUSL1Q8N0Z8 303 aaKnown RBP3.36□□□□□ -1.87
SF3B1-212ENST00000496458 CA13Q8N1Q1 262 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 TMEM251Q8N6I4 163 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 HSD17B11Q8NBQ5 300 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 ATP6V1C2Q8NEY4 427 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 OR4K2Q8NGD2 314 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 RAB2BQ8WUD1 216 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 FGF11Q92914 225 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 EEF1AKMT3Q96AZ1 226 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 FLYWCH2Q96CP2 140 aaKnown RBP3.36□□□□□ -1.87
SF3B1-212ENST00000496458 CMTM5Q96DZ9 223 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 YIPF6Q96EC8 236 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 DYNLL2Q96FJ2 89 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 TAAR1Q96RJ0 339 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 HBEGFQ99075 208 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 TSNAXQ99598 290 aaKnown RBP3.36□□□□□ -1.87
SF3B1-212ENST00000496458 RBBP8Q99708 897 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 RARRES2Q99969 163 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 OSBPL11Q9BXB4 747 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 ACTR6Q9GZN1 396 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 EFCAB1Q9HAE3 211 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 CXorf21Q9HAI6 301 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 HSPE1-MOB4S4R3N1 261 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 NAV1Q8NEY1 1877 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 MYH4Q9Y623 1939 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 TRIOBPQ9H2D6 2365 aa3.36□□□□□ -1.87
SF3B1-212ENST00000496458 PHIPQ8WWQ0 1821 aa3.35□□□□□ -1.87
SF3B1-212ENST00000496458 DOCK1Q14185 1865 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms