RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 SPIN3Q5JUX0 258 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 Q6P435 159 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 CEMP1Q6PRD7 247 aaPredicted RBP2.33□□□□□ -2.04
CLK1-214ENST00000496205 OPN5Q6U736 354 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 DGAT2L6Q6ZPD8 337 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 Q6ZSR6 202 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 NT5DC3Q86UY8 548 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 RIMKLAQ8IXN7 391 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 RNF175Q8N4F7 328 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 C15orf56Q8N910 161 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 OR5M1Q8NGP8 315 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 OR13G1Q8NGZ3 307 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 ERMNQ8TAM6 284 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 ASB13Q8WXK3 278 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 PTX4Q96A99 478 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 TMEM159Q96B96 161 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 TMA16Q96EY4 203 aaKnown RBP2.33□□□□□ -2.04
CLK1-214ENST00000496205 SMIM8Q96KF7 97 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 FAM210BQ96KR6 192 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 TMEM243Q9BU79 118 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 CDCA4Q9BXL8 241 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 MRPL20Q9BYC9 149 aaKnown RBP2.33□□□□□ -2.04
CLK1-214ENST00000496205 SAMD10Q9BYL1 202 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 MAP1LC3AQ9H492 121 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 DMAC2Q9NW81 257 aa2.33□□□□□ -2.04
CLK1-214ENST00000496205 MN1Q10571 1320 aaPredicted RBP2.33□□□□□ -2.04
CLK1-214ENST00000496205 IGLV11-55A0A075B6I3 123 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.32□□□□□ -2.04
CLK1-214ENST00000496205 IGKV1-8A0A0C4DH67 115 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 A0A1B0GXF2 115 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 ZNF705GA8MUZ8 300 aaPredicted RBP2.32□□□□□ -2.04
CLK1-214ENST00000496205 F5H5T6 163 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 TMX2-CTNND1H3BSU7 103 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 CCDC22O60826 627 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 PDCD6O75340 191 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 LYPLA2O95372 231 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 MT-ND4P03905 459 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 TCRBP04435 133 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 PRTN3P24158 256 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 AGTR1P30556 359 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 CBX5P45973 191 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 UBE2AP49459 152 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 SULT1A1P50225 295 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 SULT1A2P50226 295 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 PSMD7P51665 324 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 LSM6P62312 80 aaKnown RBP2.32□□□□□ -2.04
CLK1-214ENST00000496205 AESQ08117 197 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 SHHQ15465 462 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 GUK1Q16774 197 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 C4orf26Q17RF5 130 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 ZNF404Q494X3 552 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 Q499Y3 187 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 KDM4DQ6B0I6 523 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 NIT1Q86X76 327 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 ZFP82Q8N141 532 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 ZCCHC24Q8N2G6 241 aaKnown RBP2.32□□□□□ -2.04
CLK1-214ENST00000496205 MUC15Q8N387 334 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 Q8N976 141 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 HAVCR2Q8TDQ0 301 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 ORAOV1Q8WV07 137 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 CYGBQ8WWM9 190 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 TM4SF18Q96CE8 201 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 IMP4Q96G21 291 aaKnown RBP2.32□□□□□ -2.04
CLK1-214ENST00000496205 KCNS1Q96KK3 526 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 SPACA5Q96QH8 159 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 OR4K3Q96R72 315 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 EBNA1BP2Q99848 306 aaKnown RBP2.32□□□□□ -2.04
CLK1-214ENST00000496205 BCL2L14Q9BZR8 327 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 MS4A6AQ9H2W1 248 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 DDX19AQ9NUU7 478 aaKnown RBP2.32□□□□□ -2.04
CLK1-214ENST00000496205 RBFOX1Q9NWB1 397 aaKnown RBP2.32□□□□□ -2.04
CLK1-214ENST00000496205 ZNF223Q9UK11 482 aaPredicted RBP2.32□□□□□ -2.04
CLK1-214ENST00000496205 ARL2BPQ9Y2Y0 163 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 LSM5Q9Y4Y9 91 aaKnown RBP2.32□□□□□ -2.04
CLK1-214ENST00000496205 ARL5AQ9Y689 179 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 ENPP4Q9Y6X5 453 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 V9GYQ6 96 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 ASTN1O14525 1302 aa2.32□□□□□ -2.04
CLK1-214ENST00000496205 TEX50A0A1B0GTY4 177 aa2.31□□□□□ -2.04
CLK1-214ENST00000496205 A0A1B0GVX0 72 aa2.31□□□□□ -2.04
CLK1-214ENST00000496205 METTL15A6NJ78 407 aa2.31□□□□□ -2.04
CLK1-214ENST00000496205 KRBOX1C9JBD0 128 aa2.31□□□□□ -2.04
CLK1-214ENST00000496205 INS-IGF2F8WCM5 200 aa2.31□□□□□ -2.04
CLK1-214ENST00000496205 KPNA3O00505 521 aaPredicted RBP2.31□□□□□ -2.04
CLK1-214ENST00000496205 GATBO75879 557 aaKnown RBP2.31□□□□□ -2.04
CLK1-214ENST00000496205 VAMP5O95183 116 aa2.31□□□□□ -2.04
CLK1-214ENST00000496205 HLA-DRAP01903 254 aa2.31□□□□□ -2.04
CLK1-214ENST00000496205 CD74P04233 296 aa2.31□□□□□ -2.04
CLK1-214ENST00000496205 LINC00614P0C842 121 aa2.31□□□□□ -2.04
CLK1-214ENST00000496205 RPL12P30050 165 aaKnown RBP2.31□□□□□ -2.04
CLK1-214ENST00000496205 GRPRP30550 384 aa2.31□□□□□ -2.04
CLK1-214ENST00000496205 PYCR1P32322 319 aa2.31□□□□□ -2.04
CLK1-214ENST00000496205 KIR3DL2P43630 455 aa2.31□□□□□ -2.04
CLK1-214ENST00000496205 HSPA13P48723 471 aa2.31□□□□□ -2.04
CLK1-214ENST00000496205 RAB14P61106 215 aa2.31□□□□□ -2.04
CLK1-214ENST00000496205 EBPQ15125 230 aaKnown RBP2.31□□□□□ -2.04
CLK1-214ENST00000496205 PTGES3Q15185 160 aaKnown RBP2.31□□□□□ -2.04
CLK1-214ENST00000496205 RBMY1FQ15415 496 aaKnown RBP2.31□□□□□ -2.04
CLK1-214ENST00000496205 CLLU1OSQ5K130 101 aa2.31□□□□□ -2.04
CLK1-214ENST00000496205 TSPO2Q5TGU0 170 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms