RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 STMN2Q93045 179 aa10.27□□□□□ -0.77
PTPRF-214ENST00000496043 CPNE2Q96FN4 548 aaPredicted RBP10.27□□□□□ -0.77
PTPRF-214ENST00000496043 RDH12Q96NR8 316 aa10.27□□□□□ -0.77
PTPRF-214ENST00000496043 GPER1Q99527 375 aa10.27□□□□□ -0.77
PTPRF-214ENST00000496043 ZNF702PQ9H963 129 aa10.27□□□□□ -0.77
PTPRF-214ENST00000496043 SMPD3Q9NY59 655 aaPredicted RBP10.27□□□□□ -0.77
PTPRF-214ENST00000496043 DPM3Q9P2X0 92 aa10.27□□□□□ -0.77
PTPRF-214ENST00000496043 WNK1Q9H4A3 2382 aa10.27□□□□□ -0.77
PTPRF-214ENST00000496043 ODAMA1E959 279 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 MEGF11A6BM72 1044 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 SLC33A1O00400 549 aaPredicted RBP10.26□□□□□ -0.77
PTPRF-214ENST00000496043 TOR1AO14656 332 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 CSN2P05814 226 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 LIMS3P0CW19 117 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 LIMS4P0CW20 117 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 CDK2P24941 298 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 DCKP27707 260 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 BRS3P32247 399 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 GTF2A1P52655 376 aaPredicted RBP10.26□□□□□ -0.77
PTPRF-214ENST00000496043 PRRX1P54821 245 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 ZP1P60852 638 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 BDH1Q02338 343 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 EMX1Q04741 257 aaPredicted RBP10.26□□□□□ -0.77
PTPRF-214ENST00000496043 CCDC58Q4VC31 144 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 PRAMEF5Q5TYX0 476 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 ELP2Q6IA86 826 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 RPL22L1Q6P5R6 122 aaKnown RBP10.26□□□□□ -0.77
PTPRF-214ENST00000496043 TMPRSS11AQ6ZMR5 421 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 PXT1Q8NFP0 134 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 OR4D6Q8NGJ1 314 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 GPR148Q8TDV2 347 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 APH1BQ8WW43 257 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 NR1H4Q96RI1 486 aaPredicted RBP10.26□□□□□ -0.77
PTPRF-214ENST00000496043 JAM3Q9BX67 310 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 ING3Q9NXR8 418 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 OR6C3Q9NZP0 311 aa10.26□□□□□ -0.77
PTPRF-214ENST00000496043 IRGMA1A4Y4 181 aa10.25□□□□□ -0.77
PTPRF-214ENST00000496043 ZNF729A6NN14 1252 aaPredicted RBP10.25□□□□□ -0.77
PTPRF-214ENST00000496043 FAM90A22PA8MWA6 464 aa10.25□□□□□ -0.77
PTPRF-214ENST00000496043 LEUTXA8MZ59 168 aa10.25□□□□□ -0.77
PTPRF-214ENST00000496043 PEX14O75381 377 aa10.25□□□□□ -0.77
PTPRF-214ENST00000496043 WBP4O75554 376 aaKnown RBP10.25□□□□□ -0.77
PTPRF-214ENST00000496043 CD2P06729 351 aa10.25□□□□□ -0.77
PTPRF-214ENST00000496043 SOX2P48431 317 aa10.25□□□□□ -0.77
PTPRF-214ENST00000496043 ARHGDIBP52566 201 aa10.25□□□□□ -0.77
PTPRF-214ENST00000496043 CDK5R1Q15078 307 aa10.25□□□□□ -0.77
PTPRF-214ENST00000496043 SMN1Q16637 294 aaKnown RBP10.25□□□□□ -0.77
PTPRF-214ENST00000496043 ZSCAN26Q16670 478 aa10.25□□□□□ -0.77
PTPRF-214ENST00000496043 ARSJQ5FYB0 599 aaPredicted RBP10.25□□□□□ -0.77
PTPRF-214ENST00000496043 ZNF565Q8N9K5 539 aa10.25□□□□□ -0.77
PTPRF-214ENST00000496043 OR4P4Q8NGL7 312 aa10.25□□□□□ -0.77
PTPRF-214ENST00000496043 TNFAIP8L1Q8WVP5 186 aa10.25□□□□□ -0.77
PTPRF-214ENST00000496043 CREB3L1Q96BA8 519 aa10.25□□□□□ -0.77
PTPRF-214ENST00000496043 BARHL1Q9BZE3 327 aa10.25□□□□□ -0.77
PTPRF-214ENST00000496043 SERTAD4Q9NUC0 356 aa10.25□□□□□ -0.77
PTPRF-214ENST00000496043 BABAM2Q9NXR7 383 aa10.25□□□□□ -0.77
PTPRF-214ENST00000496043 MEGF8Q7Z7M0 2845 aa10.25□□□□□ -0.77
PTPRF-214ENST00000496043 H0YJX3 145 aa10.24□□□□□ -0.77
PTPRF-214ENST00000496043 ALDOBP05062 364 aa10.24□□□□□ -0.77
PTPRF-214ENST00000496043 JUNBP17275 347 aaPredicted RBP10.24□□□□□ -0.77
PTPRF-214ENST00000496043 CD34P28906 385 aa10.24□□□□□ -0.77
PTPRF-214ENST00000496043 C21orf33P30042 268 aaPredicted RBP10.24□□□□□ -0.77
PTPRF-214ENST00000496043 CEACAM3P40198 252 aa10.24□□□□□ -0.77
PTPRF-214ENST00000496043 PTGFRP43088 359 aa10.24□□□□□ -0.77
PTPRF-214ENST00000496043 ETV1P50549 477 aa10.24□□□□□ -0.77
PTPRF-214ENST00000496043 BLCAPP62952 87 aa10.24□□□□□ -0.77
PTPRF-214ENST00000496043 MED21Q13503 144 aa10.24□□□□□ -0.77
PTPRF-214ENST00000496043 HABP2Q14520 560 aaPredicted RBP10.24□□□□□ -0.77
PTPRF-214ENST00000496043 RSU1Q15404 277 aa10.24□□□□□ -0.77
PTPRF-214ENST00000496043 TTC23Q5W5X9 447 aa10.24□□□□□ -0.77
PTPRF-214ENST00000496043 ZNF529Q6P280 563 aa10.24□□□□□ -0.77
PTPRF-214ENST00000496043 BAIAP2L2Q6UXY1 529 aa10.24□□□□□ -0.77
PTPRF-214ENST00000496043 ASCL4Q6XD76 172 aa10.24□□□□□ -0.77
PTPRF-214ENST00000496043 OR51T1Q8NGJ9 327 aa10.24□□□□□ -0.77
PTPRF-214ENST00000496043 CNIH3Q8TBE1 160 aa10.24□□□□□ -0.77
PTPRF-214ENST00000496043 CAPSLQ8WWF8 208 aa10.24□□□□□ -0.77
PTPRF-214ENST00000496043 COQ2Q96H96 371 aa10.24□□□□□ -0.77
PTPRF-214ENST00000496043 NCOR1P1Q9H4R4 102 aa10.24□□□□□ -0.77
PTPRF-214ENST00000496043 CHCHD3Q9NX63 227 aaKnown RBP10.24□□□□□ -0.77
PTPRF-214ENST00000496043 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.24□□□□□ -0.77
PTPRF-214ENST00000496043 ING4Q9UNL4 249 aa10.24□□□□□ -0.77
PTPRF-214ENST00000496043 KBTBD11-OT1A0A1B0GTJ5 212 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 BUB1B-PAK6H3BSN5 160 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 GABRPO00591 440 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 OGG1O15527 345 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 FBXO24O75426 580 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 HTR3BO95264 441 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 IGLV1-47P01700 117 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 OPN1MWP04001 364 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 OPN1MW2P0DN77 364 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 OPN1MW3P0DN78 364 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 CGB3P0DN86 165 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 CGB7P0DN87 165 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 MYL12AP19105 171 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 GDNFP39905 211 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 IL13RA2Q14627 380 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 ATXN7L3Q14CW9 347 aaPredicted RBP10.23□□□□□ -0.77
PTPRF-214ENST00000496043 C17orf58Q2M2W7 97 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 PAN3Q58A45 887 aaKnown RBP10.23□□□□□ -0.77
PTPRF-214ENST00000496043 OR2G6Q5TZ20 316 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms