RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 RPL3LQ92901 407 aaKnown RBP7.47□□□□□ -1.21
SMARCAL1-213ENST00000496037 BPIFA2Q96DR5 249 aa7.47□□□□□ -1.21
SMARCAL1-213ENST00000496037 SDSLQ96GA7 329 aa7.47□□□□□ -1.21
SMARCAL1-213ENST00000496037 Q96M85 177 aa7.47□□□□□ -1.21
SMARCAL1-213ENST00000496037 TMEM68Q96MH6 324 aa7.47□□□□□ -1.21
SMARCAL1-213ENST00000496037 FAM110AQ9BQ89 295 aa7.47□□□□□ -1.21
SMARCAL1-213ENST00000496037 RTL8AQ9BWD3 113 aa7.47□□□□□ -1.21
SMARCAL1-213ENST00000496037 PAPOLGQ9BWT3 736 aaKnown RBP7.47□□□□□ -1.21
SMARCAL1-213ENST00000496037 NDEL1Q9GZM8 345 aa7.47□□□□□ -1.21
SMARCAL1-213ENST00000496037 ZNF222Q9UK12 451 aa7.47□□□□□ -1.21
SMARCAL1-213ENST00000496037 RAP2CQ9Y3L5 183 aa7.47□□□□□ -1.21
SMARCAL1-213ENST00000496037 FAM32AQ9Y421 112 aaKnown RBP7.47□□□□□ -1.21
SMARCAL1-213ENST00000496037 CEPT1Q9Y6K0 416 aa7.47□□□□□ -1.21
SMARCAL1-213ENST00000496037 FAT2Q9NYQ8 4349 aa7.47□□□□□ -1.21
SMARCAL1-213ENST00000496037 CXorf65A6NEN9 183 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 NUPR2A6NF83 97 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 C5orf52A6NGY3 159 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 TMEM210A6NLX4 147 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 SLC22A2O15244 555 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 ITM2AO43736 263 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 BPGMP07738 259 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 CD14P08571 375 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 ZNF728P0DKX0 622 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 PRDX6P30041 224 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 ALDH3B2P48448 385 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 SLC9A3P48764 834 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 BCAP31P51572 246 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 POLR2JP52435 117 aaKnown RBP7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 PDZK1IP1Q13113 114 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 KIR3DS1Q14943 382 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 LRIF1Q5T3J3 769 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 SLC18B1Q6NT16 456 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 DNM1P34Q6PK57 102 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 ACP7Q6ZNF0 438 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 ZBTB49Q6ZSB9 765 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 KCTD8Q6ZWB6 473 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 MAVSQ7Z434 540 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 SLC35E3Q7Z769 313 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 OAFQ86UD1 273 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 SERPINA12Q8IW75 414 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 FTMTQ8N4E7 242 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 ZNF561Q8N587 486 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 SLC26A7Q8TE54 656 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 GIPC3Q8TF64 312 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 GTF2H4Q92759 462 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 NRBF2Q96F24 287 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 KRTAP4-12Q9BQ66 201 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 NUAK2Q9H093 628 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 PPP1R3EQ9H7J1 279 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 RETNQ9HD89 108 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 RPRD1BQ9NQG5 326 aaKnown RBP7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 DNAH2Q9P225 4427 aa7.46□□□□□ -1.22
SMARCAL1-213ENST00000496037 MUC4Q99102 2169 aa7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 IGHV2-26A0A0B4J1V2 119 aa7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 OVOL1O14753 267 aa7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 ST8SIA3O43173 380 aa7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 XRCC2O43543 280 aa7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 IL1AP01583 271 aa7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 VPREB1P12018 145 aa7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 ARSBP15848 533 aa7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 PRRX1P54821 245 aa7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 DLX6P56179 175 aa7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 ATP5IP56385 69 aaPredicted RBP7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 ABCE1P61221 599 aaKnown RBP7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 GPR50Q13585 617 aa7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 PNLIPRP3Q17RR3 467 aa7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 ZNF829Q3KNS6 432 aaPredicted RBP7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 GAGE13Q4V321 117 aa7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 DRAM2Q6UX65 266 aa7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 FAM71E2Q8N5Q1 922 aa7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 SPSB1Q96BD6 273 aa7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 CLEC7AQ9BXN2 247 aa7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 GON7Q9BXV9 100 aa7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 POLR2J2Q9GZM3 115 aaKnown RBP7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 POLR2J3Q9H1A7 115 aaKnown RBP7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 NMNAT1Q9HAN9 279 aaPredicted RBP7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 PNRC2Q9NPJ4 139 aaKnown RBP7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 SLC25A37Q9NYZ2 338 aa7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 RIMS3Q9UJD0 308 aa7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 HSPG2P98160 4391 aa7.45□□□□□ -1.22
SMARCAL1-213ENST00000496037 FUOMA2VDF0 154 aa7.44□□□□□ -1.22
SMARCAL1-213ENST00000496037 EFCAB9A8MZ26 197 aa7.44□□□□□ -1.22
SMARCAL1-213ENST00000496037 EVPLLA8MZ36 301 aa7.44□□□□□ -1.22
SMARCAL1-213ENST00000496037 SDHDO14521 159 aa7.44□□□□□ -1.22
SMARCAL1-213ENST00000496037 PSPNO60542 156 aa7.44□□□□□ -1.22
SMARCAL1-213ENST00000496037 OCM2P0CE71 109 aa7.44□□□□□ -1.22
SMARCAL1-213ENST00000496037 OCMP0CE72 109 aaPredicted RBP7.44□□□□□ -1.22
SMARCAL1-213ENST00000496037 FAM106CPP0CH98 169 aa7.44□□□□□ -1.22
SMARCAL1-213ENST00000496037 HOXB9P17482 250 aaPredicted RBP7.44□□□□□ -1.22
SMARCAL1-213ENST00000496037 CRABP1P29762 137 aa7.44□□□□□ -1.22
SMARCAL1-213ENST00000496037 ARPC4P59998 168 aa7.44□□□□□ -1.22
SMARCAL1-213ENST00000496037 ESRRGP62508 458 aa7.44□□□□□ -1.22
SMARCAL1-213ENST00000496037 ZNF616Q08AN1 781 aa7.44□□□□□ -1.22
SMARCAL1-213ENST00000496037 FOXE3Q13461 319 aa7.44□□□□□ -1.22
SMARCAL1-213ENST00000496037 NFYCQ13952 458 aa7.44□□□□□ -1.22
SMARCAL1-213ENST00000496037 SLC36A3Q495N2 470 aa7.44□□□□□ -1.22
SMARCAL1-213ENST00000496037 LPCAT4Q643R3 524 aa7.44□□□□□ -1.22
SMARCAL1-213ENST00000496037 ACSM6Q6P461 480 aa7.44□□□□□ -1.22
SMARCAL1-213ENST00000496037 CD300LDQ6UXZ3 194 aa7.44□□□□□ -1.22
SMARCAL1-213ENST00000496037 SLC16A9Q7RTY1 509 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms