RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 ASB9Q96DX5 294 aa11.26□□□□□ -0.61
VARS-228ENST00000495010 TBX5Q99593 518 aa11.26□□□□□ -0.61
VARS-228ENST00000495010 ADGRL4Q9HBW9 690 aa11.26□□□□□ -0.61
VARS-228ENST00000495010 DNAH9Q9NYC9 4486 aa11.26□□□□□ -0.61
VARS-228ENST00000495010 ODAMA1E959 279 aa11.25□□□□□ -0.61
VARS-228ENST00000495010 ZNF729A6NN14 1252 aaPredicted RBP11.25□□□□□ -0.61
VARS-228ENST00000495010 FGF16O43320 207 aa11.25□□□□□ -0.61
VARS-228ENST00000495010 FAM107AO95990 144 aa11.25□□□□□ -0.61
VARS-228ENST00000495010 PRKACBP22694 351 aa11.25□□□□□ -0.61
VARS-228ENST00000495010 LUMP51884 338 aaPredicted RBP11.25□□□□□ -0.61
VARS-228ENST00000495010 HNF4GQ14541 408 aa11.25□□□□□ -0.61
VARS-228ENST00000495010 PTGES3Q15185 160 aaKnown RBP11.25□□□□□ -0.61
VARS-228ENST00000495010 NKAPLQ5M9Q1 402 aa11.25□□□□□ -0.61
VARS-228ENST00000495010 NXNL2Q5VZ03 156 aa11.25□□□□□ -0.61
VARS-228ENST00000495010 TEX38Q6PEX7 206 aa11.25□□□□□ -0.61
VARS-228ENST00000495010 LHFPL2Q6ZUX7 228 aa11.25□□□□□ -0.61
VARS-228ENST00000495010 C5orf56Q8N8D9 126 aa11.25□□□□□ -0.61
VARS-228ENST00000495010 Q8NFD4 153 aa11.25□□□□□ -0.61
VARS-228ENST00000495010 OR8U1Q8NH10 309 aa11.25□□□□□ -0.61
VARS-228ENST00000495010 RAX2Q96IS3 184 aa11.25□□□□□ -0.61
VARS-228ENST00000495010 NSL1Q96IY1 281 aa11.25□□□□□ -0.61
VARS-228ENST00000495010 HMG20AQ9NP66 347 aa11.25□□□□□ -0.61
VARS-228ENST00000495010 KRT84Q9NSB2 600 aa11.25□□□□□ -0.61
VARS-228ENST00000495010 A0A087X0M5 115 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 A0A1B0GX30 115 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 FAM90A18PA6NE21 464 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 FAM90A16PA6NEW6 464 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 FAM90A20PA6NIJ5 464 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 METTL15A6NJ78 407 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 FAM90A9PA6NNJ1 464 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 FAM90A12PA8MX19 464 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 FAM90A5PA8MXJ8 464 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 FAM90A15PP0C7V4 464 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 FAM90A13PP0C7W8 464 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 FAM90A14PP0C7W9 464 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 FAM90A24PP0C7X0 464 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 ZNF20P17024 532 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 GID4Q8IVV7 300 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 STPG2Q8N412 459 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 DRAM1Q8N682 238 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 TCEANCQ8N8B7 351 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 MUC7Q8TAX7 377 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 CANT1Q8WVQ1 401 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 GON7Q9BXV9 100 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 NEK6Q9HC98 313 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 OR6C3Q9NZP0 311 aa11.24□□□□□ -0.61
VARS-228ENST00000495010 LOC107986453A0A1B0GWG9 222 aa11.23□□□□□ -0.61
VARS-228ENST00000495010 AQP12BA6NM10 295 aa11.23□□□□□ -0.61
VARS-228ENST00000495010 SEC14L6B5MCN3 397 aa11.23□□□□□ -0.61
VARS-228ENST00000495010 IGHG2P01859 326 aa11.23□□□□□ -0.61
VARS-228ENST00000495010 UBCP0CG48 685 aaKnown RBP11.23□□□□□ -0.61
VARS-228ENST00000495010 ATF1P18846 271 aa11.23□□□□□ -0.61
VARS-228ENST00000495010 RAB7AP51149 207 aa11.23□□□□□ -0.61
VARS-228ENST00000495010 PDZK1IP1Q13113 114 aa11.23□□□□□ -0.61
VARS-228ENST00000495010 MADCAM1Q13477 382 aa11.23□□□□□ -0.61
VARS-228ENST00000495010 DOC2BQ14184 412 aa11.23□□□□□ -0.61
VARS-228ENST00000495010 ATXN7L3Q14CW9 347 aaPredicted RBP11.23□□□□□ -0.61
VARS-228ENST00000495010 PNLIPRP3Q17RR3 467 aa11.23□□□□□ -0.61
VARS-228ENST00000495010 CXorf66Q5JRM2 361 aaPredicted RBP11.23□□□□□ -0.61
VARS-228ENST00000495010 CASC10Q5T4H9 136 aa11.23□□□□□ -0.61
VARS-228ENST00000495010 LCNL1Q6ZST4 164 aa11.23□□□□□ -0.61
VARS-228ENST00000495010 SSX6Q7RTT6 188 aa11.23□□□□□ -0.61
VARS-228ENST00000495010 AQP12AQ8IXF9 295 aa11.23□□□□□ -0.61
VARS-228ENST00000495010 ZNF565Q8N9K5 539 aa11.23□□□□□ -0.61
VARS-228ENST00000495010 CHST4Q8NCG5 386 aa11.23□□□□□ -0.61
VARS-228ENST00000495010 TMEM163Q8TC26 289 aa11.23□□□□□ -0.61
VARS-228ENST00000495010 RFT1Q96AA3 541 aa11.23□□□□□ -0.61
VARS-228ENST00000495010 DCLRE1BQ9H816 532 aa11.23□□□□□ -0.61
VARS-228ENST00000495010 KBTBD11-OT1A0A1B0GTJ5 212 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 NCBP2LA6PVI3 153 aaKnown RBP11.22□□□□□ -0.61
VARS-228ENST00000495010 J3QR06 171 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 M0R129 80 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 AP4M1O00189 453 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 DEGS1O15121 323 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 SULT1C4O75897 302 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 LY86O95711 162 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 IGKV1D-33P01593 117 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 IGKV1-33P01594 117 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 IGHV3-7P01780 117 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 RPLP1P05386 114 aaKnown RBP11.22□□□□□ -0.61
VARS-228ENST00000495010 CSN2P05814 226 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 OR2T7P0C7T2 308 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 CHATP28329 748 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 ATP6V1E1P36543 226 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 GLP1RP43220 463 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 C17orf58Q2M2W7 97 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 DEFB136Q30KP8 78 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 KIAA2026Q5HYC2 2103 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 AADACL4Q5VUY2 407 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 FAM220AQ7Z4H9 259 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 OR8H3Q8N146 312 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 OR10H4Q8NGA5 316 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 HAVCR2Q8TDQ0 301 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 SPSB1Q96BD6 273 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 KIRREL1Q96J84 757 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 OPALINQ96PE5 141 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 IL4I1Q96RQ9 567 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 COMMD4Q9H0A8 199 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 RHOFQ9HBH0 211 aa11.22□□□□□ -0.61
VARS-228ENST00000495010 PALMDQ9NP74 551 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 194.7 ms