RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 CALRP27797 417 aaKnown RBP13.33□□□□□ -0.28
YIF1A-209ENST00000494836 P2RX3P56373 397 aa13.33□□□□□ -0.28
YIF1A-209ENST00000494836 RBM11P57052 281 aaKnown RBP13.33□□□□□ -0.28
YIF1A-209ENST00000494836 MEF2CQ06413 473 aaPredicted RBP13.33□□□□□ -0.28
YIF1A-209ENST00000494836 C9orf139Q6ZV77 190 aa13.33□□□□□ -0.28
YIF1A-209ENST00000494836 LINC00596Q86U02 117 aa13.33□□□□□ -0.28
YIF1A-209ENST00000494836 BCL6BQ8N143 479 aaPredicted RBP13.33□□□□□ -0.28
YIF1A-209ENST00000494836 TPRX1Q8N7U7 411 aa13.33□□□□□ -0.28
YIF1A-209ENST00000494836 UNKLQ9H9P5 680 aaKnown RBP13.33□□□□□ -0.28
YIF1A-209ENST00000494836 A0A0A6YYJ9 748 aa13.32□□□□□ -0.28
YIF1A-209ENST00000494836 IGHV1-69DA0A0B4J2H0 117 aa13.32□□□□□ -0.28
YIF1A-209ENST00000494836 A0A1W2PP11 408 aa13.32□□□□□ -0.28
YIF1A-209ENST00000494836 FUOMA2VDF0 154 aa13.32□□□□□ -0.28
YIF1A-209ENST00000494836 OR7C1O76099 320 aaPredicted RBP13.32□□□□□ -0.28
YIF1A-209ENST00000494836 IGHV1-69P01742 117 aa13.32□□□□□ -0.28
YIF1A-209ENST00000494836 CSN2P05814 226 aa13.32□□□□□ -0.28
YIF1A-209ENST00000494836 CCL3L1P16619 93 aa13.32□□□□□ -0.28
YIF1A-209ENST00000494836 PRTN3P24158 256 aa13.32□□□□□ -0.28
YIF1A-209ENST00000494836 ERP29P30040 261 aaKnown RBP13.32□□□□□ -0.28
YIF1A-209ENST00000494836 GUCA2AQ02747 115 aa13.32□□□□□ -0.28
YIF1A-209ENST00000494836 ATXN7L3Q14CW9 347 aaPredicted RBP13.32□□□□□ -0.28
YIF1A-209ENST00000494836 NEDD8Q15843 81 aa13.32□□□□□ -0.28
YIF1A-209ENST00000494836 PAN3Q58A45 887 aaKnown RBP13.32□□□□□ -0.28
YIF1A-209ENST00000494836 RUSC1-AS1Q66K80 236 aa13.32□□□□□ -0.28
YIF1A-209ENST00000494836 NCR3LG1Q68D85 454 aa13.32□□□□□ -0.28
YIF1A-209ENST00000494836 CD200R1LQ6Q8B3 271 aa13.32□□□□□ -0.28
YIF1A-209ENST00000494836 METAP1DQ6UB28 335 aaPredicted RBP13.32□□□□□ -0.28
YIF1A-209ENST00000494836 RBMS3Q6XE24 437 aaKnown RBP13.32□□□□□ -0.28
YIF1A-209ENST00000494836 USP43Q70EL4 1123 aa13.32□□□□□ -0.28
YIF1A-209ENST00000494836 PDZD9Q8IXQ8 264 aa13.32□□□□□ -0.28
YIF1A-209ENST00000494836 MRPS24Q96EL2 167 aaKnown RBP13.32□□□□□ -0.28
YIF1A-209ENST00000494836 C1orf147Q96MC9 270 aaPredicted RBP13.32□□□□□ -0.28
YIF1A-209ENST00000494836 GHRLQ9UBU3 117 aa13.32□□□□□ -0.28
YIF1A-209ENST00000494836 LINC00312Q9Y6C7 94 aa13.32□□□□□ -0.28
YIF1A-209ENST00000494836 TRAV24A0A0B4J272 114 aa13.31□□□□□ -0.28
YIF1A-209ENST00000494836 TRDV1A0A1B0GX56 115 aa13.31□□□□□ -0.28
YIF1A-209ENST00000494836 MEX3AA1L020 520 aaKnown RBP13.31□□□□□ -0.28
YIF1A-209ENST00000494836 HSPB6O14558 160 aa13.31□□□□□ -0.28
YIF1A-209ENST00000494836 GEMIN2O14893 280 aaKnown RBP13.31□□□□□ -0.28
YIF1A-209ENST00000494836 CRTAPO75718 401 aaPredicted RBP13.31□□□□□ -0.28
YIF1A-209ENST00000494836 UBBP0CG47 229 aa13.31□□□□□ -0.28
YIF1A-209ENST00000494836 ZNF728P0DKX0 622 aa13.31□□□□□ -0.28
YIF1A-209ENST00000494836 GALP22466 123 aa13.31□□□□□ -0.28
YIF1A-209ENST00000494836 DLX1P56177 255 aa13.31□□□□□ -0.28
YIF1A-209ENST00000494836 HILS1P60008 231 aa13.31□□□□□ -0.28
YIF1A-209ENST00000494836 PRB3Q04118 309 aaPredicted RBP13.31□□□□□ -0.28
YIF1A-209ENST00000494836 AESQ08117 197 aa13.31□□□□□ -0.28
YIF1A-209ENST00000494836 MPV17LQ2QL34 196 aa13.31□□□□□ -0.28
YIF1A-209ENST00000494836 C1orf100Q5SVJ3 147 aa13.31□□□□□ -0.28
YIF1A-209ENST00000494836 SIGLECL1Q8N7X8 197 aa13.31□□□□□ -0.28
YIF1A-209ENST00000494836 TNFRSF14Q92956 283 aa13.31□□□□□ -0.28
YIF1A-209ENST00000494836 ZNF714Q96N38 554 aa13.31□□□□□ -0.28
YIF1A-209ENST00000494836 JMJD8Q96S16 334 aa13.31□□□□□ -0.28
YIF1A-209ENST00000494836 CST11Q9H112 138 aa13.31□□□□□ -0.28
YIF1A-209ENST00000494836 IFT22Q9H7X7 185 aa13.31□□□□□ -0.28
YIF1A-209ENST00000494836 DSCAML1Q8TD84 2053 aa13.3□□□□□ -0.28
YIF1A-209ENST00000494836 RNASEK-C17orf49H0YIS7 233 aa13.3□□□□□ -0.28
YIF1A-209ENST00000494836 MGMTP16455 207 aa13.3□□□□□ -0.28
YIF1A-209ENST00000494836 HTR2CP28335 458 aa13.3□□□□□ -0.28
YIF1A-209ENST00000494836 DLX6P56179 175 aa13.3□□□□□ -0.28
YIF1A-209ENST00000494836 KLRD1Q13241 179 aa13.3□□□□□ -0.28
YIF1A-209ENST00000494836 TAF9Q16594 264 aa13.3□□□□□ -0.28
YIF1A-209ENST00000494836 TUSC1Q2TAM9 212 aa13.3□□□□□ -0.28
YIF1A-209ENST00000494836 KRBOX4Q5JUW0 171 aa13.3□□□□□ -0.28
YIF1A-209ENST00000494836 SYT6Q5T7P8 510 aaPredicted RBP13.3□□□□□ -0.28
YIF1A-209ENST00000494836 TCF23Q7RTU1 214 aa13.3□□□□□ -0.28
YIF1A-209ENST00000494836 TRAPPC6BQ86SZ2 158 aa13.3□□□□□ -0.28
YIF1A-209ENST00000494836 TMEM104Q8NE00 496 aa13.3□□□□□ -0.28
YIF1A-209ENST00000494836 TSPAN14Q8NG11 270 aa13.3□□□□□ -0.28
YIF1A-209ENST00000494836 OR6M1Q8NGM8 313 aa13.3□□□□□ -0.28
YIF1A-209ENST00000494836 SELENOIQ9C0D9 397 aa13.3□□□□□ -0.28
YIF1A-209ENST00000494836 BANF2Q9H503 90 aa13.3□□□□□ -0.28
YIF1A-209ENST00000494836 PLGRKTQ9HBL7 147 aa13.3□□□□□ -0.28
YIF1A-209ENST00000494836 VCX3AQ9NNX9 186 aa13.3□□□□□ -0.28
YIF1A-209ENST00000494836 ING3Q9NXR8 418 aa13.3□□□□□ -0.28
YIF1A-209ENST00000494836 AK6Q9Y3D8 172 aaKnown RBP13.3□□□□□ -0.28
YIF1A-209ENST00000494836 SOX21Q9Y651 276 aaPredicted RBP13.3□□□□□ -0.28
YIF1A-209ENST00000494836 A0A087WXM4 84 aa13.29□□□□□ -0.28
YIF1A-209ENST00000494836 TRGV10A0A0A0MS01 117 aa13.29□□□□□ -0.28
YIF1A-209ENST00000494836 ODAMA1E959 279 aa13.29□□□□□ -0.28
YIF1A-209ENST00000494836 C17orf98A8MV24 154 aa13.29□□□□□ -0.28
YIF1A-209ENST00000494836 SLC22A1O15245 554 aa13.29□□□□□ -0.28
YIF1A-209ENST00000494836 VENTXO95231 258 aa13.29□□□□□ -0.28
YIF1A-209ENST00000494836 RBP4P02753 201 aa13.29□□□□□ -0.28
YIF1A-209ENST00000494836 CD37P11049 281 aa13.29□□□□□ -0.28
YIF1A-209ENST00000494836 MYL9P24844 172 aa13.29□□□□□ -0.28
YIF1A-209ENST00000494836 GLIPR1P48060 266 aa13.29□□□□□ -0.28
YIF1A-209ENST00000494836 KCNJ3P48549 501 aa13.29□□□□□ -0.28
YIF1A-209ENST00000494836 ERVFRD-1P60508 538 aa13.29□□□□□ -0.28
YIF1A-209ENST00000494836 SRSF2Q01130 221 aaKnown RBP13.29□□□□□ -0.28
YIF1A-209ENST00000494836 ATAD3CQ5T2N8 411 aa13.29□□□□□ -0.28
YIF1A-209ENST00000494836 C11orf42Q8N5U0 333 aa13.29□□□□□ -0.28
YIF1A-209ENST00000494836 SUMF2Q8NBJ7 301 aa13.29□□□□□ -0.28
YIF1A-209ENST00000494836 FAM46BQ96A09 425 aa13.29□□□□□ -0.28
YIF1A-209ENST00000494836 COQ2Q96H96 371 aa13.29□□□□□ -0.28
YIF1A-209ENST00000494836 ZNF48Q96MX3 618 aaPredicted RBP13.29□□□□□ -0.28
YIF1A-209ENST00000494836 GFI1Q99684 422 aa13.29□□□□□ -0.28
YIF1A-209ENST00000494836 DPCDQ9BVM2 203 aaPredicted RBP13.29□□□□□ -0.28
YIF1A-209ENST00000494836 HEXA-AS1Q9H8Q6 139 aa13.29□□□□□ -0.28
YIF1A-209ENST00000494836 SPACA1Q9HBV2 294 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms