RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 ZNF100Q8IYN0 542 aa13.27□□□□□ -0.29
SDF4-207ENST00000494748 ZNF295-AS1Q8N0V1 137 aa13.27□□□□□ -0.29
SDF4-207ENST00000494748 ZNF501Q96CX3 271 aaPredicted RBP13.27□□□□□ -0.29
SDF4-207ENST00000494748 NIPSNAP3BQ9BS92 247 aa13.27□□□□□ -0.29
SDF4-207ENST00000494748 PRO1933Q9H354 126 aa13.27□□□□□ -0.29
SDF4-207ENST00000494748 A0A1W2PR77 199 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 M0R135 149 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 SSSCA1O60232 199 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 DKK1O94907 266 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 MSX1P28360 303 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 PRSS12P56730 875 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 NKX6-1P78426 367 aaPredicted RBP13.26□□□□□ -0.29
SDF4-207ENST00000494748 H3F3AP84243 136 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 DLX2Q07687 328 aaPredicted RBP13.26□□□□□ -0.29
SDF4-207ENST00000494748 OR2AE1Q8NHA4 323 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 ZNF799Q96GE5 643 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 TGIF2Q9GZN2 237 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 SLC7A11Q9UPY5 501 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 CLEC18AA5D8T8 446 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 FUT3P21217 361 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 CRYGSP22914 178 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 NKX2-1P43699 371 aaPredicted RBP13.26□□□□□ -0.29
SDF4-207ENST00000494748 CD81P60033 236 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 HLA-DRB3P79483 266 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 C5orf24Q7Z6I8 188 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 SELENOHQ8IZQ5 122 aaKnown RBP13.26□□□□□ -0.29
SDF4-207ENST00000494748 CLEC18CQ8NCF0 446 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 SPSB1Q96BD6 273 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 S100PBPQ96BU1 408 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 SSX3Q99909 188 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 MAGT1Q9H0U3 335 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 NKX2-4Q9H2Z4 354 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 SEMA5BQ9P283 1151 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 FAM230AA0A1W2PPH8 454 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 IFNA10P01566 189 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 IL2RGP31785 369 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 RGS19P49795 217 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 PAX9P55771 341 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 TAS2R60P59551 318 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 CHAF1BQ13112 559 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 NMSQ5H8A3 153 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 SSX9Q7RTT3 188 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 OR5R1Q8NH85 324 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 FAM210BQ96KR6 192 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 ZNF700Q9H0M5 742 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 CDH20Q9HBT6 801 aa13.26□□□□□ -0.29
SDF4-207ENST00000494748 KIAA2026Q5HYC2 2103 aa13.25□□□□□ -0.29
SDF4-207ENST00000494748 IGHV1OR21-1A0A087WYE8 117 aa13.25□□□□□ -0.29
SDF4-207ENST00000494748 TRBV11-1A0A0K0K1C0 115 aa13.25□□□□□ -0.29
SDF4-207ENST00000494748 MKRN2OSH3BPM6 223 aa13.25□□□□□ -0.29
SDF4-207ENST00000494748 PPYP01298 95 aa13.25□□□□□ -0.29
SDF4-207ENST00000494748 Q6ZS52 159 aa13.25□□□□□ -0.29
SDF4-207ENST00000494748 RLN3Q8WXF3 142 aa13.25□□□□□ -0.29
SDF4-207ENST00000494748 ZNF837Q96EG3 531 aaPredicted RBP13.25□□□□□ -0.29
SDF4-207ENST00000494748 TMEM242Q9NWH2 141 aa13.25□□□□□ -0.29
SDF4-207ENST00000494748 A0A087X0M5 115 aa13.25□□□□□ -0.29
SDF4-207ENST00000494748 A0A1B0GU03 582 aa13.25□□□□□ -0.29
SDF4-207ENST00000494748 A0A1B0GX30 115 aa13.25□□□□□ -0.29
SDF4-207ENST00000494748 CST7O76096 145 aa13.25□□□□□ -0.29
SDF4-207ENST00000494748 ABLIM2Q6H8Q1 611 aa13.25□□□□□ -0.29
SDF4-207ENST00000494748 TMEM123Q8N131 208 aa13.25□□□□□ -0.29
SDF4-207ENST00000494748 ZNF385AQ96PM9 386 aaKnown RBP13.25□□□□□ -0.29
SDF4-207ENST00000494748 RNF115Q9Y4L5 304 aa13.25□□□□□ -0.29
SDF4-207ENST00000494748 IGLV3-12A0A075B6K2 115 aa13.25□□□□□ -0.29
SDF4-207ENST00000494748 TRAV1-1A0A0B4J248 108 aa13.25□□□□□ -0.29
SDF4-207ENST00000494748 ID3Q02535 119 aa13.25□□□□□ -0.29
SDF4-207ENST00000494748 RBMXL1Q96E39 390 aaKnown RBP13.25□□□□□ -0.29
SDF4-207ENST00000494748 PACRGQ96M98 296 aaPredicted RBP13.25□□□□□ -0.29
SDF4-207ENST00000494748 DKKL1Q9UK85 242 aa13.25□□□□□ -0.29
SDF4-207ENST00000494748 B4DEV8 164 aa13.24□□□□□ -0.29
SDF4-207ENST00000494748 PGA5P0DJD9 388 aa13.24□□□□□ -0.29
SDF4-207ENST00000494748 CEACAM6P40199 344 aa13.24□□□□□ -0.29
SDF4-207ENST00000494748 TMEM42Q69YG0 159 aa13.24□□□□□ -0.29
SDF4-207ENST00000494748 FADS6Q8N9I5 356 aa13.24□□□□□ -0.29
SDF4-207ENST00000494748 CCDC71LQ8N9Z2 235 aa13.24□□□□□ -0.29
SDF4-207ENST00000494748 ZNF286AQ9HBT8 521 aa13.24□□□□□ -0.29
SDF4-207ENST00000494748 PTRH2Q9Y3E5 179 aaKnown RBP13.24□□□□□ -0.29
SDF4-207ENST00000494748 C9J4A7 227 aa13.24□□□□□ -0.29
SDF4-207ENST00000494748 PDCD1Q15116 288 aa13.24□□□□□ -0.29
SDF4-207ENST00000494748 TBC1D26Q86UD7 250 aa13.24□□□□□ -0.29
SDF4-207ENST00000494748 DNASE2BQ8WZ79 361 aa13.24□□□□□ -0.29
SDF4-207ENST00000494748 ABHD14BQ96IU4 210 aa13.24□□□□□ -0.29
SDF4-207ENST00000494748 GPHA2Q96T91 129 aa13.24□□□□□ -0.29
SDF4-207ENST00000494748 ABCA7Q8IZY2 2146 aa13.24□□□□□ -0.29
SDF4-207ENST00000494748 ADAM20O43506 726 aa13.23□□□□□ -0.29
SDF4-207ENST00000494748 RPL23AP62750 156 aaKnown RBP13.23□□□□□ -0.29
SDF4-207ENST00000494748 ZNF154Q13106 437 aa13.23□□□□□ -0.29
SDF4-207ENST00000494748 TRIM61Q5EBN2 209 aa13.23□□□□□ -0.29
SDF4-207ENST00000494748 DPPA2Q7Z7J5 298 aa13.23□□□□□ -0.29
SDF4-207ENST00000494748 DEFB119Q8N690 84 aa13.23□□□□□ -0.29
SDF4-207ENST00000494748 GNPNAT1Q96EK6 184 aaPredicted RBP13.23□□□□□ -0.29
SDF4-207ENST00000494748 MISP3Q96FF7 219 aa13.23□□□□□ -0.29
SDF4-207ENST00000494748 C2orf88Q9BSF0 95 aa13.23□□□□□ -0.29
SDF4-207ENST00000494748 PLSCR2Q9NRY7 297 aa13.23□□□□□ -0.29
SDF4-207ENST00000494748 CD200P41217 278 aa13.23□□□□□ -0.29
SDF4-207ENST00000494748 DPPA3Q6W0C5 159 aa13.23□□□□□ -0.29
SDF4-207ENST00000494748 SSX7Q7RTT5 188 aa13.23□□□□□ -0.29
SDF4-207ENST00000494748 TRBV24-1A0A075B6N3 115 aa13.23□□□□□ -0.29
SDF4-207ENST00000494748 SHBQ15464 509 aa13.23□□□□□ -0.29
SDF4-207ENST00000494748 ZNF726P1Q15940 193 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms