RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 RAB18Q9NP72 206 aa9.05□□□□□ -0.96
CLCN6-208ENST00000494028 U3KQ87 197 aa9.05□□□□□ -0.96
CLCN6-208ENST00000494028 A0A1B0GWJ7 208 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 TIMM8AO60220 97 aaPredicted RBP9.04□□□□□ -0.96
CLCN6-208ENST00000494028 NOS1APO75052 506 aaPredicted RBP9.04□□□□□ -0.96
CLCN6-208ENST00000494028 ADAP1O75689 374 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 CFDP00746 253 aaPredicted RBP9.04□□□□□ -0.96
CLCN6-208ENST00000494028 GLAP06280 429 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 ZNF728P0DKX0 622 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 C4BPBP20851 252 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 TUBG1P23258 451 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 ZNF83P51522 516 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 UCP3P55916 312 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 FXYD4P59646 89 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 FGL1Q08830 312 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 HERPUD1Q15011 391 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 C3orf36Q3SXR2 165 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 TIMM23BQ5SRD1 257 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 SHEQ5VZ18 495 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 MBNL2Q5VZF2 373 aaKnown RBP9.04□□□□□ -0.96
CLCN6-208ENST00000494028 C11orf87Q6NUJ2 197 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 ZNF880Q6PDB4 577 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 GSG1LQ6UXU4 331 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 UNQ6126/PRO20091Q6UXV3 157 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 Q8IYB0 196 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 NEK7Q8TDX7 302 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 PPP1R1CQ8WVI7 109 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 GTF3AQ92664 365 aaKnown RBP9.04□□□□□ -0.96
CLCN6-208ENST00000494028 CABLES2Q9BTV7 478 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 TLNRD1Q9H1K6 362 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 NAA60Q9H7X0 242 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 HES4Q9HCC6 221 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 TUBG2Q9NRH3 451 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 RDH8Q9NYR8 311 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 TINAGQ9UJW2 476 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 TNFSF18Q9UNG2 199 aa9.04□□□□□ -0.96
CLCN6-208ENST00000494028 IGKV1-6A0A0C4DH72 117 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.03□□□□□ -0.96
CLCN6-208ENST00000494028 RNF222A6NCQ9 220 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 FAM25EA8MYX2 175 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 RP2O75695 350 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 KNG1P01042 644 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 PPYP01298 95 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 HOXD4P09016 255 aaPredicted RBP9.03□□□□□ -0.96
CLCN6-208ENST00000494028 ZNF44P15621 663 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 NFYAP23511 347 aaPredicted RBP9.03□□□□□ -0.96
CLCN6-208ENST00000494028 S100A11P31949 105 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 FCGR2CP31995 323 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 HERV-K104P61576 105 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 ZNF345Q14585 488 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 LRRC37A5PQ49AS3 106 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 IGSF11Q5DX21 431 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 PRAMEF6Q5VXH4 476 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 TMEM65Q6PI78 240 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 DHRS11Q6UWP2 260 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 TMUB2Q71RG4 321 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 C5orf24Q7Z6I8 188 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 RELL2Q8NC24 303 aaPredicted RBP9.03□□□□□ -0.96
CLCN6-208ENST00000494028 PLPPR1Q8TBJ4 325 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 RDH5Q92781 318 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 PIK3IP1Q96FE7 263 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 RSRP1Q9BUV0 290 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 CXXC4Q9H2H0 198 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 COMMD9Q9P000 198 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 MBD2Q9UBB5 411 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 FZR1Q9UM11 496 aa9.03□□□□□ -0.96
CLCN6-208ENST00000494028 SHANK1Q9Y566 2161 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 PTPRQQ9UMZ3 2332 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 KIR2DS1A0A191URI9 304 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 C5orf51A6NDU8 294 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 MPTX1A8MV57 137 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 C1QTNF9BB2RNN3 333 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 TRDCB7Z8K6 153 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 EEF1E1-BLOC1S5C9J1V9 151 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 M0R1B8 84 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 SIRPB1O00241 398 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 SLC33A1O00400 549 aaPredicted RBP9.02□□□□□ -0.97
CLCN6-208ENST00000494028 DEGS1O15121 323 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 B3GALNT1O75752 331 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 TUSC2O75896 110 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 SNAPC5O75971 98 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 OR2H2O95918 312 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 IFNA2P01563 188 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 SCTP09683 121 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 C1QTNF9P0C862 333 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 RBMXP38159 391 aaKnown RBP9.02□□□□□ -0.97
CLCN6-208ENST00000494028 MDH2P40926 338 aaKnown RBP9.02□□□□□ -0.97
CLCN6-208ENST00000494028 KIR2DS4P43632 304 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 PIGPP57054 158 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 TMPRSS3P57727 454 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 GMFBP60983 142 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 NKX6-1P78426 367 aaPredicted RBP9.02□□□□□ -0.97
CLCN6-208ENST00000494028 KIR2DS1Q14954 304 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 ATXN7L3Q14CW9 347 aaPredicted RBP9.02□□□□□ -0.97
CLCN6-208ENST00000494028 ZNF146Q15072 292 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 ZNF718Q3SXZ3 478 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 PAN3Q58A45 887 aaKnown RBP9.02□□□□□ -0.97
CLCN6-208ENST00000494028 MOB1BQ7L9L4 216 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 DOLPP1Q86YN1 238 aa9.02□□□□□ -0.97
CLCN6-208ENST00000494028 SGPP2Q8IWX5 399 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms