RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 IL13RA2Q14627 380 aa18.41■□□□□ 0.54
SNIP1-203ENST00000493916 OR13D1Q8NGV5 346 aa18.41■□□□□ 0.54
SNIP1-203ENST00000493916 OR5R1Q8NH85 324 aa18.41■□□□□ 0.54
SNIP1-203ENST00000493916 C17orf50Q8WW18 174 aa18.41■□□□□ 0.54
SNIP1-203ENST00000493916 TAF15Q92804 592 aaKnown RBP eCLIP18.41■□□□□ 0.54
SNIP1-203ENST00000493916 ORAI1Q96D31 301 aa18.41■□□□□ 0.54
SNIP1-203ENST00000493916 OR14A2Q96R54 314 aa18.41■□□□□ 0.54
SNIP1-203ENST00000493916 VPREB3Q9UKI3 123 aa18.41■□□□□ 0.54
SNIP1-203ENST00000493916 UBE2J1Q9Y385 318 aaPredicted RBP18.41■□□□□ 0.54
SNIP1-203ENST00000493916 DSCAML1Q8TD84 2053 aa18.41■□□□□ 0.54
SNIP1-203ENST00000493916 PNMA8CA0A1B0GUJ8 204 aa18.4■□□□□ 0.54
SNIP1-203ENST00000493916 MEX3AA1L020 520 aaKnown RBP18.4■□□□□ 0.54
SNIP1-203ENST00000493916 ODF3BA8MYP8 253 aa18.4■□□□□ 0.54
SNIP1-203ENST00000493916 PTGES3LE9PB15 166 aa18.4■□□□□ 0.54
SNIP1-203ENST00000493916 DEGS1O15121 323 aa18.4■□□□□ 0.54
SNIP1-203ENST00000493916 RSU1Q15404 277 aa18.4■□□□□ 0.54
SNIP1-203ENST00000493916 GDPGP1Q6ZNW5 385 aa18.4■□□□□ 0.54
SNIP1-203ENST00000493916 OR11H6Q8NGC7 330 aa18.4■□□□□ 0.54
SNIP1-203ENST00000493916 OR4F5Q8NH21 305 aa18.4■□□□□ 0.54
SNIP1-203ENST00000493916 THRSPQ92748 146 aa18.4■□□□□ 0.54
SNIP1-203ENST00000493916 MEGF9Q9H1U4 602 aa18.4■□□□□ 0.54
SNIP1-203ENST00000493916 PPA2Q9H2U2 334 aa18.4■□□□□ 0.54
SNIP1-203ENST00000493916 PAK1IP1Q9NWT1 392 aaPredicted RBP18.4■□□□□ 0.54
SNIP1-203ENST00000493916 TRAV8-7A0A075B6U6 113 aa18.39■□□□□ 0.53
SNIP1-203ENST00000493916 A0A1B0GUS0 222 aa18.39■□□□□ 0.53
SNIP1-203ENST00000493916 POM121CA8CG34 1229 aa18.39■□□□□ 0.53
SNIP1-203ENST00000493916 H0YHG0 523 aa18.39■□□□□ 0.53
SNIP1-203ENST00000493916 CLPXO76031 633 aa18.39■□□□□ 0.53
SNIP1-203ENST00000493916 MDKP21741 143 aaPredicted RBP18.39■□□□□ 0.53
SNIP1-203ENST00000493916 HSPA13P48723 471 aa18.39■□□□□ 0.53
SNIP1-203ENST00000493916 RAG2P55895 527 aa18.39■□□□□ 0.53
SNIP1-203ENST00000493916 LGALS4P56470 323 aa18.39■□□□□ 0.53
SNIP1-203ENST00000493916 SLC35A2P78381 396 aa18.39■□□□□ 0.53
SNIP1-203ENST00000493916 RELBQ01201 579 aa18.39■□□□□ 0.53
SNIP1-203ENST00000493916 SCN1BQ07699 218 aa18.39■□□□□ 0.53
SNIP1-203ENST00000493916 AANATQ16613 207 aa18.39■□□□□ 0.53
SNIP1-203ENST00000493916 NHLRC3Q5JS37 347 aa18.39■□□□□ 0.53
SNIP1-203ENST00000493916 CORO2AQ92828 525 aa18.39■□□□□ 0.53
SNIP1-203ENST00000493916 DERL3Q96Q80 235 aa18.39■□□□□ 0.53
SNIP1-203ENST00000493916 ZNF184Q99676 751 aaPredicted RBP18.39■□□□□ 0.53
SNIP1-203ENST00000493916 NKX3-1Q99801 234 aaPredicted RBP18.39■□□□□ 0.53
SNIP1-203ENST00000493916 METTL9Q9H1A3 318 aa18.39■□□□□ 0.53
SNIP1-203ENST00000493916 FOXJ3Q9UPW0 622 aa18.39■□□□□ 0.53
SNIP1-203ENST00000493916 LSM2Q9Y333 95 aaKnown RBP18.39■□□□□ 0.53
SNIP1-203ENST00000493916 SESN1Q9Y6P5 492 aa18.39■□□□□ 0.53
SNIP1-203ENST00000493916 TRGV10A0A0A0MS01 117 aa18.38■□□□□ 0.53
SNIP1-203ENST00000493916 FAM90A8PA6NJQ4 464 aa18.38■□□□□ 0.53
SNIP1-203ENST00000493916 OMGP23515 440 aa18.38■□□□□ 0.53
SNIP1-203ENST00000493916 AESQ08117 197 aa18.38■□□□□ 0.53
SNIP1-203ENST00000493916 ZNF626Q68DY1 528 aa18.38■□□□□ 0.53
SNIP1-203ENST00000493916 IZUMO2Q6UXV1 221 aa18.38■□□□□ 0.53
SNIP1-203ENST00000493916 TRAPPC6BQ86SZ2 158 aa18.38■□□□□ 0.53
SNIP1-203ENST00000493916 OR10K1Q8NGX5 313 aa18.38■□□□□ 0.53
SNIP1-203ENST00000493916 COQ2Q96H96 371 aa18.38■□□□□ 0.53
SNIP1-203ENST00000493916 GAL3ST2Q9H3Q3 398 aa18.38■□□□□ 0.53
SNIP1-203ENST00000493916 TAS2R3Q9NYW6 316 aa18.38■□□□□ 0.53
SNIP1-203ENST00000493916 TPRKBQ9Y3C4 175 aa18.38■□□□□ 0.53
SNIP1-203ENST00000493916 TBL2Q9Y4P3 447 aaKnown RBP18.38■□□□□ 0.53
SNIP1-203ENST00000493916 ODAMA1E959 279 aa18.37■□□□□ 0.53
SNIP1-203ENST00000493916 MAGEA13PA6NCF6 341 aa18.37■□□□□ 0.53
SNIP1-203ENST00000493916 CDRT1O95170 752 aa18.37■□□□□ 0.53
SNIP1-203ENST00000493916 MAPK3P27361 379 aaPredicted RBP18.37■□□□□ 0.53
SNIP1-203ENST00000493916 TGFBR2P37173 567 aa18.37■□□□□ 0.53
SNIP1-203ENST00000493916 GLIPR1P48060 266 aa18.37■□□□□ 0.53
SNIP1-203ENST00000493916 IRF3Q14653 427 aa18.37■□□□□ 0.53
SNIP1-203ENST00000493916 LRRC75BQ2VPJ9 315 aa18.37■□□□□ 0.53
SNIP1-203ENST00000493916 PIGYQ3MUY2 71 aa18.37■□□□□ 0.53
SNIP1-203ENST00000493916 SHISA2Q6UWI4 295 aa18.37■□□□□ 0.53
SNIP1-203ENST00000493916 SGCDQ92629 289 aa18.37■□□□□ 0.53
SNIP1-203ENST00000493916 NR1H4Q96RI1 486 aaPredicted RBP18.37■□□□□ 0.53
SNIP1-203ENST00000493916 DUSP21Q9H596 190 aa18.37■□□□□ 0.53
SNIP1-203ENST00000493916 IFT22Q9H7X7 185 aa18.37■□□□□ 0.53
SNIP1-203ENST00000493916 BEX1Q9HBH7 125 aa18.37■□□□□ 0.53
SNIP1-203ENST00000493916 TRAV24A0A0B4J272 114 aa18.36■□□□□ 0.53
SNIP1-203ENST00000493916 ZNF780AO75290 641 aaPredicted RBP18.36■□□□□ 0.53
SNIP1-203ENST00000493916 HTR3BO95264 441 aa18.36■□□□□ 0.53
SNIP1-203ENST00000493916 ARG1P05089 322 aa18.36■□□□□ 0.53
SNIP1-203ENST00000493916 PAX5Q02548 391 aa18.36■□□□□ 0.53
SNIP1-203ENST00000493916 ATXN7L3Q14CW9 347 aaPredicted RBP18.36■□□□□ 0.53
SNIP1-203ENST00000493916 SPHARQ15513 63 aa18.36■□□□□ 0.53
SNIP1-203ENST00000493916 KRBOX4Q5JUW0 171 aa18.36■□□□□ 0.53
SNIP1-203ENST00000493916 LINC00596Q86U02 117 aa18.36■□□□□ 0.53
SNIP1-203ENST00000493916 CDH26Q8IXH8 852 aa18.36■□□□□ 0.53
SNIP1-203ENST00000493916 FOXRED1Q96CU9 486 aaPredicted RBP18.36■□□□□ 0.53
SNIP1-203ENST00000493916 OR5M11Q96RB7 305 aa18.36■□□□□ 0.53
SNIP1-203ENST00000493916 S100A13Q99584 98 aa18.36■□□□□ 0.53
SNIP1-203ENST00000493916 SSX3Q99909 188 aa18.36■□□□□ 0.53
SNIP1-203ENST00000493916 TMEM133Q9H2Q1 129 aa18.36■□□□□ 0.53
SNIP1-203ENST00000493916 ING4Q9UNL4 249 aa18.36■□□□□ 0.53
SNIP1-203ENST00000493916 IGHV2-26A0A0B4J1V2 119 aa18.35■□□□□ 0.53
SNIP1-203ENST00000493916 A0A1W2PPK0 400 aa18.35■□□□□ 0.53
SNIP1-203ENST00000493916 H3BUX3 64 aa18.35■□□□□ 0.53
SNIP1-203ENST00000493916 PIN1P1O15428 100 aa18.35■□□□□ 0.53
SNIP1-203ENST00000493916 KCNJ3P48549 501 aa18.35■□□□□ 0.53
SNIP1-203ENST00000493916 RBM11P57052 281 aaKnown RBP18.35■□□□□ 0.53
SNIP1-203ENST00000493916 PAN3Q58A45 887 aaKnown RBP18.35■□□□□ 0.53
SNIP1-203ENST00000493916 HEPN1Q6WQI6 88 aa18.35■□□□□ 0.53
SNIP1-203ENST00000493916 LHFPL4Q7Z7J7 247 aa18.35■□□□□ 0.53
SNIP1-203ENST00000493916 OSR2Q8N2R0 312 aa18.35■□□□□ 0.53
SNIP1-203ENST00000493916 MS4A15Q8N5U1 240 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms