RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 KISS1Q15726 138 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 FAM189A2Q15884 450 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 SSX2Q16385 188 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 Q6P435 159 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 TRAPPC6BQ86SZ2 158 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 DHRSXQ8N5I4 330 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 PARP16Q8N5Y8 322 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 OR51A2Q8NGJ7 313 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 PIFOQ8TCI5 191 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 RDH12Q96NR8 316 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 CITED1Q99966 193 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 C16orf95Q9H693 158 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 TAS2R4Q9NYW5 299 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 A0A0G2JK05 382 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 FAM172BPA6NC97 362 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 FAM90A8PA6NJQ4 464 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 MGST3O14880 152 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 DEGS1O15121 323 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 TSPAN9O75954 239 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 LALBAP00709 142 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 DCKP27707 260 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 P2RX3P56373 397 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 ZP1P60852 638 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 ADARB1P78563 741 aaKnown RBP8.62□□□□□ -1.03
COL6A3-214ENST00000493608 MEF2CQ06413 473 aaPredicted RBP8.62□□□□□ -1.03
COL6A3-214ENST00000493608 MRPL28Q13084 256 aaKnown RBP8.62□□□□□ -1.03
COL6A3-214ENST00000493608 CDK5R1Q15078 307 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 SPIN3Q5JUX0 258 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 TTC23Q5W5X9 447 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 ASPHD2Q6ICH7 369 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 ZFP41Q8N8Y5 198 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 OR13C5Q8NGS8 318 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 OR10K1Q8NGX5 313 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 GGHQ92820 318 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 CITED4Q96RK1 184 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 GPER1Q99527 375 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 SEBOXQ9HB31 216 aaPredicted RBP8.62□□□□□ -1.03
COL6A3-214ENST00000493608 TCF7L1Q9HCS4 588 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 BABAM2Q9NXR7 383 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 HILPDAQ9Y5L2 63 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 LINC00312Q9Y6C7 94 aa8.62□□□□□ -1.03
COL6A3-214ENST00000493608 ODF3BA8MYP8 253 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 HSPB6O14558 160 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 MAGEB3O15480 346 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 PAX4O43316 350 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 CHST1O43916 411 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 CLPXO76031 633 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 GNAO1P09471 354 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 RAB3AP20336 220 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 LMO1P25800 156 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 GABRA5P31644 462 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 GDNFP39905 211 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 ATXN7L3Q14CW9 347 aaPredicted RBP8.61□□□□□ -1.03
COL6A3-214ENST00000493608 PRAMEF5Q5TYX0 476 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 ZNF626Q68DY1 528 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 RPL22L1Q6P5R6 122 aaKnown RBP8.61□□□□□ -1.03
COL6A3-214ENST00000493608 CCBE1Q6UXH8 406 aaPredicted RBP8.61□□□□□ -1.03
COL6A3-214ENST00000493608 TMPRSS11AQ6ZMR5 421 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 TMEM219Q86XT9 240 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 SAXO1Q8IYX7 474 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 OR11H6Q8NGC7 330 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 NDNFQ8TB73 568 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 GPR148Q8TDV2 347 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 TNFAIP8L1Q8WVP5 186 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 TMEM80Q96HE8 168 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 JAM3Q9BX67 310 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 FAM192AQ9GZU8 254 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 DIMT1Q9UNQ2 313 aaKnown RBP8.61□□□□□ -1.03
COL6A3-214ENST00000493608 SESN1Q9Y6P5 492 aa8.61□□□□□ -1.03
COL6A3-214ENST00000493608 TET2Q6N021 2002 aaPredicted RBP8.61□□□□□ -1.03
COL6A3-214ENST00000493608 IGHV2-26A0A0B4J1V2 119 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 PNMA8CA0A1B0GUJ8 204 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 H0YJX3 145 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 SLC33A1O00400 549 aaPredicted RBP8.6□□□□□ -1.03
COL6A3-214ENST00000493608 GABRPO00591 440 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 OGG1O15527 345 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 XPNPEP2O43895 674 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 CDRT1O95170 752 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 HTR3BO95264 441 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 RBP4P02753 201 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 MYL12AP19105 171 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 CDK2P24941 298 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 ERP29P30040 261 aaKnown RBP8.6□□□□□ -1.03
COL6A3-214ENST00000493608 OR3A4PP47883 348 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 SLC34A1Q06495 639 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 ST3GAL4Q11206 333 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 HABP2Q14520 560 aaPredicted RBP8.6□□□□□ -1.03
COL6A3-214ENST00000493608 CCDC58Q4VC31 144 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 KRBOX4Q5JUW0 171 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 LAIR2Q6ISS4 152 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 ZNF529Q6P280 563 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 PACRGLQ8N7B6 248 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 C11orf44Q8N8P7 122 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 SETD9Q8NE22 299 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 TMEM106AQ96A25 262 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 MALSU1Q96EH3 234 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 COQ2Q96H96 371 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 PPIL3Q9H2H8 161 aaKnown RBP8.6□□□□□ -1.03
COL6A3-214ENST00000493608 TMEM133Q9H2Q1 129 aa8.6□□□□□ -1.03
COL6A3-214ENST00000493608 ABCB10Q9NRK6 738 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 239.1 ms