RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 PRRG2O14669 202 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 GEMIN2O14893 280 aaKnown RBP8.56□□□□□ -1.04
PRPF3-206ENST00000493553 SMPD2O60906 423 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 B3GALNT1O75752 331 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 SFT2D2O95562 160 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 NGFP01138 241 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 IGKV1D-12P01611 117 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 TK1P04183 234 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 FCGR3AP08637 254 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 RPA2P15927 270 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 AKR1C4P17516 323 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 HOXA5P20719 270 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 GCH1P30793 250 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 OPRM1P35372 400 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 NUP62P37198 522 aaPredicted RBP8.56□□□□□ -1.04
PRPF3-206ENST00000493553 RBMXP38159 391 aaKnown RBP8.56□□□□□ -1.04
PRPF3-206ENST00000493553 NPY4RP50391 375 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 ZNF81P51508 661 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 IDH3GP51553 393 aaPredicted RBP8.56□□□□□ -1.04
PRPF3-206ENST00000493553 RPS23P62266 143 aaKnown RBP8.56□□□□□ -1.04
PRPF3-206ENST00000493553 ESCO2Q56NI9 601 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 FAM76BQ5HYJ3 339 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 SPIN3Q5JUX0 258 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 TIMM23BQ5SRD1 257 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 SIGIRRQ6IA17 410 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 GSG1LQ6UXU4 331 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 RFPL4BQ6ZWI9 263 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 RNF144BQ7Z419 303 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 FAM58AQ8N1B3 248 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 FAM57AQ8TBR7 257 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 MARCH1Q8TCQ1 289 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 CCDC140Q96MF4 163 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 KRTAP4-7Q9BYR0 210 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 CHMP1AQ9HD42 196 aaPredicted RBP8.56□□□□□ -1.04
PRPF3-206ENST00000493553 ZNF71Q9NQZ8 489 aaPredicted RBP8.56□□□□□ -1.04
PRPF3-206ENST00000493553 AK3Q9UIJ7 227 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 MSRB2Q9Y3D2 182 aa8.56□□□□□ -1.04
PRPF3-206ENST00000493553 TNFSF13O75888 250 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 LYZL6O75951 148 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 OR2F2O95006 317 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 PLATP00750 562 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 CGAP01215 116 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 IFNA2P01563 188 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 IFNA21P01568 189 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 IGLV1-44P01699 117 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 SFTPBP07988 381 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 ZNF728P0DKX0 622 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 CCL2P13500 99 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 ZNF35P13682 527 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 KITLGP21583 273 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 KCNJ3P48549 501 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 AP2S1P53680 142 aaPredicted RBP8.55□□□□□ -1.04
PRPF3-206ENST00000493553 HERV-K104P61576 105 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 RBPJQ06330 500 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 PPP1R1AQ13522 171 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 OR2F1Q13607 317 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 HLXQ14774 488 aaPredicted RBP8.55□□□□□ -1.04
PRPF3-206ENST00000493553 OR8G1Q15617 311 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 ABCA11PQ4W5N1 156 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 SHEQ5VZ18 495 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 CALHM1Q8IU99 346 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 SLC38A6Q8IZM9 456 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 RBMXL3Q8N7X1 1067 aaKnown RBP8.55□□□□□ -1.04
PRPF3-206ENST00000493553 LINC01356Q8N9X3 169 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 OR8H1Q8NGG4 311 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 OR52B4Q8NGK2 314 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 OR1J1Q8NGS3 322 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 OR13G1Q8NGZ3 307 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 THAP6Q8TBB0 222 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 HPSE2Q8WWQ2 592 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 EXTL1Q92935 676 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 STARD4Q96DR4 205 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 SULT4A1Q9BR01 284 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 SUCNR1Q9BXA5 334 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 NMES1Q9C002 83 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 OR51I2Q9H344 312 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 CA10Q9NS85 328 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 TMEM100Q9NV29 134 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 C1orf123Q9NWV4 160 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 MAB21L2Q9Y586 359 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 FREM1Q5H8C1 2179 aa8.55□□□□□ -1.04
PRPF3-206ENST00000493553 OR5H14A6NHG9 310 aa8.54□□□□□ -1.04
PRPF3-206ENST00000493553 KRTAP9-7A8MTY7 169 aa8.54□□□□□ -1.04
PRPF3-206ENST00000493553 SMLR1H3BR10 107 aa8.54□□□□□ -1.04
PRPF3-206ENST00000493553 NOS1APO75052 506 aaPredicted RBP8.54□□□□□ -1.04
PRPF3-206ENST00000493553 CA6P23280 308 aa8.54□□□□□ -1.04
PRPF3-206ENST00000493553 S100A11P31949 105 aa8.54□□□□□ -1.04
PRPF3-206ENST00000493553 CEACAM8P31997 349 aaPredicted RBP8.54□□□□□ -1.04
PRPF3-206ENST00000493553 H2BFSP57053 126 aa8.54□□□□□ -1.04
PRPF3-206ENST00000493553 SELENOVP59797 346 aa8.54□□□□□ -1.04
PRPF3-206ENST00000493553 ZNF345Q14585 488 aa8.54□□□□□ -1.04
PRPF3-206ENST00000493553 OPCMLQ14982 345 aa8.54□□□□□ -1.04
PRPF3-206ENST00000493553 TESK1Q15569 626 aa8.54□□□□□ -1.04
PRPF3-206ENST00000493553 PIGYQ3MUY2 71 aa8.54□□□□□ -1.04
PRPF3-206ENST00000493553 MBNL2Q5VZF2 373 aaKnown RBP8.54□□□□□ -1.04
PRPF3-206ENST00000493553 OR2T2Q6IF00 324 aa8.54□□□□□ -1.04
PRPF3-206ENST00000493553 HAGHLQ6PII5 290 aaPredicted RBP8.54□□□□□ -1.04
PRPF3-206ENST00000493553 TEX261Q6UWH6 196 aa8.54□□□□□ -1.04
PRPF3-206ENST00000493553 WDR31Q8NA23 367 aa8.54□□□□□ -1.04
PRPF3-206ENST00000493553 INO80EQ8NBZ0 244 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms