RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 SPHKAPQ2M3C7 1700 aa3.14□□□□□ -1.91
VPS13A-212ENST00000493341 DAPL1A0PJW8 107 aa3.14□□□□□ -1.91
VPS13A-212ENST00000493341 UPK2O00526 184 aa3.14□□□□□ -1.91
VPS13A-212ENST00000493341 GPR171O14626 319 aa3.14□□□□□ -1.91
VPS13A-212ENST00000493341 CYTH3O43739 400 aa3.14□□□□□ -1.91
VPS13A-212ENST00000493341 SYNGR1O43759 233 aa3.14□□□□□ -1.91
VPS13A-212ENST00000493341 CTDNEP1O95476 244 aa3.14□□□□□ -1.91
VPS13A-212ENST00000493341 ZNF806P0C7X5 589 aa3.14□□□□□ -1.91
VPS13A-212ENST00000493341 HIST1H1CP16403 213 aaKnown RBP3.14□□□□□ -1.91
VPS13A-212ENST00000493341 ELK1P19419 428 aa3.14□□□□□ -1.91
VPS13A-212ENST00000493341 WNT4P56705 351 aa3.14□□□□□ -1.91
VPS13A-212ENST00000493341 MPPED2Q15777 294 aa3.14□□□□□ -1.91
VPS13A-212ENST00000493341 CLEC12AQ5QGZ9 265 aa3.14□□□□□ -1.91
VPS13A-212ENST00000493341 C12orf56Q8IXR9 622 aa3.14□□□□□ -1.91
VPS13A-212ENST00000493341 C15orf56Q8N910 161 aa3.14□□□□□ -1.91
VPS13A-212ENST00000493341 OR6K3Q8NGY3 331 aa3.14□□□□□ -1.91
VPS13A-212ENST00000493341 OR1L1Q8NH94 360 aa3.14□□□□□ -1.91
VPS13A-212ENST00000493341 NEURL3Q96EH8 262 aa3.14□□□□□ -1.91
VPS13A-212ENST00000493341 TBL1XR1Q9BZK7 514 aa3.14□□□□□ -1.91
VPS13A-212ENST00000493341 MTCH2Q9Y6C9 303 aa3.14□□□□□ -1.91
VPS13A-212ENST00000493341 NWD1Q149M9 1564 aa3.13□□□□□ -1.91
VPS13A-212ENST00000493341 TMEM131LA2VDJ0 1609 aa3.13□□□□□ -1.91
VPS13A-212ENST00000493341 LOC102724200A0A096LPH7 203 aaPredicted RBP3.13□□□□□ -1.91
VPS13A-212ENST00000493341 A0A0G2JMP0 313 aa3.13□□□□□ -1.91
VPS13A-212ENST00000493341 A0A0X1KG70 313 aa3.13□□□□□ -1.91
VPS13A-212ENST00000493341 LOC389332A0A1B0GUA5 103 aa3.13□□□□□ -1.91
VPS13A-212ENST00000493341 F5H768 121 aa3.13□□□□□ -1.91
VPS13A-212ENST00000493341 H0Y980 276 aa3.13□□□□□ -1.91
VPS13A-212ENST00000493341 H0YJW9 148 aa3.13□□□□□ -1.91
VPS13A-212ENST00000493341 IGHV3-11P01762 117 aa3.13□□□□□ -1.91
VPS13A-212ENST00000493341 ATF1P18846 271 aa3.13□□□□□ -1.91
VPS13A-212ENST00000493341 MAGOHP61326 146 aaKnown RBP3.13□□□□□ -1.91
VPS13A-212ENST00000493341 COX19Q49B96 90 aa3.13□□□□□ -1.91
VPS13A-212ENST00000493341 ATP6AP1LQ52LC2 224 aa3.13□□□□□ -1.91
VPS13A-212ENST00000493341 DGAT2L6Q6ZPD8 337 aa3.13□□□□□ -1.91
VPS13A-212ENST00000493341 PRNTQ86SH4 94 aa3.13□□□□□ -1.91
VPS13A-212ENST00000493341 SLC13A5Q86YT5 568 aaPredicted RBP3.13□□□□□ -1.91
VPS13A-212ENST00000493341 RNF138Q8WVD3 245 aa3.13□□□□□ -1.91
VPS13A-212ENST00000493341 KLF13Q9Y2Y9 288 aaPredicted RBP3.13□□□□□ -1.91
VPS13A-212ENST00000493341 KIF25-AS1Q9Y6Z4 181 aa3.13□□□□□ -1.91
VPS13A-212ENST00000493341 CHD2O14647 1828 aaKnown RBP3.13□□□□□ -1.91
VPS13A-212ENST00000493341 ANKRD50Q9ULJ7 1429 aa3.13□□□□□ -1.91
VPS13A-212ENST00000493341 ATRXP46100 2492 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 TRAV8-2A0A0B4J237 113 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 IGKV6-21A0A0C4DH24 114 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 CCRL2O00421 344 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 ZW10O43264 779 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 UGT2B11O75310 529 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 ASS1P00966 412 aaKnown RBP3.12□□□□□ -1.91
VPS13A-212ENST00000493341 ZNF688P0C7X2 276 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 SLC2A1P11166 492 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 RCVRNP35243 200 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 SYCNQ0VAF6 134 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 KCTD16Q68DU8 428 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 CASP12Q6UXS9 341 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 ZNF584Q8IVC4 421 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 RIBC1Q8N443 379 aaPredicted RBP3.12□□□□□ -1.91
VPS13A-212ENST00000493341 LINC00337Q8N6G1 96 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 SLC26A10Q8NG04 563 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 TTLQ8NG68 377 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 OR2M7Q8NG81 312 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 SMIM19Q96E16 107 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 ASB7Q9H672 318 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 PARP11Q9NR21 331 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 RPS6KB2Q9UBS0 482 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 TBL2Q9Y4P3 447 aaKnown RBP3.12□□□□□ -1.91
VPS13A-212ENST00000493341 ALKQ9UM73 1620 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 NRCAMQ92823 1304 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 VWA8A3KMH1 1905 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 DIP2AQ14689 1571 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 SCAF11Q99590 1463 aaKnown RBP3.12□□□□□ -1.91
VPS13A-212ENST00000493341 DYSFO75923 2080 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 CEACAM18A8MTB9 384 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 F5H5K5 113 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 BPY2O14599 106 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 PHYHO14832 338 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 BIRC5O15392 142 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 SOCS1O15524 211 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 ATP5HO75947 161 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 OR2A4O95047 310 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 APOEP02649 317 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 OR4Q2P0C623 313 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 PSG2P11465 335 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 MEF2CQ06413 473 aaPredicted RBP3.12□□□□□ -1.91
VPS13A-212ENST00000493341 ZNF404Q494X3 552 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 YIF1BQ5BJH7 314 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 XKRXQ6PP77 449 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 FAM231DQ6ZW35 169 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 LYG1Q8N1E2 194 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 GATD1Q8NB37 220 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 SYNPRQ8TBG9 265 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 RNF133Q8WVZ7 376 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 CCL17Q92583 94 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 KCTD7Q96MP8 289 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 OR2A7Q96R45 310 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 LINC01587Q99440 93 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 METTL9Q9H1A3 318 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 SPANXB1Q9NS25 103 aaPredicted RBP3.12□□□□□ -1.91
VPS13A-212ENST00000493341 FGFR1OP2Q9NVK5 253 aa3.12□□□□□ -1.91
VPS13A-212ENST00000493341 DMAC2Q9NW81 257 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms