RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 TRAV8-7A0A075B6U6 113 aa20.02■□□□□ 0.8
UPF3A-209ENST00000492270 POM121CA8CG34 1229 aa20.02■□□□□ 0.8
UPF3A-209ENST00000492270 ODF3BA8MYP8 253 aa20.02■□□□□ 0.8
UPF3A-209ENST00000492270 DEGS1O15121 323 aa20.02■□□□□ 0.8
UPF3A-209ENST00000492270 CDRT1O95170 752 aa20.02■□□□□ 0.8
UPF3A-209ENST00000492270 ALDOBP05062 364 aa20.02■□□□□ 0.8
UPF3A-209ENST00000492270 ARG1P05089 322 aa20.02■□□□□ 0.8
UPF3A-209ENST00000492270 BDKRB2P30411 391 aa20.02■□□□□ 0.8
UPF3A-209ENST00000492270 LGALS4P56470 323 aa20.02■□□□□ 0.8
UPF3A-209ENST00000492270 TAS2R43P59537 309 aa20.02■□□□□ 0.8
UPF3A-209ENST00000492270 ATXN7L3Q14CW9 347 aaPredicted RBP20.02■□□□□ 0.8
UPF3A-209ENST00000492270 PIGYQ3MUY2 71 aa20.02■□□□□ 0.8
UPF3A-209ENST00000492270 C6orf141Q5SZD1 244 aa20.02■□□□□ 0.8
UPF3A-209ENST00000492270 LDLRAD2Q5SZI1 272 aa20.02■□□□□ 0.8
UPF3A-209ENST00000492270 NANOGP1Q8N7R0 232 aa20.02■□□□□ 0.8
UPF3A-209ENST00000492270 OR13D1Q8NGV5 346 aa20.02■□□□□ 0.8
UPF3A-209ENST00000492270 OR5R1Q8NH85 324 aa20.02■□□□□ 0.8
UPF3A-209ENST00000492270 COQ2Q96H96 371 aa20.02■□□□□ 0.8
UPF3A-209ENST00000492270 MEGF9Q9H1U4 602 aa20.02■□□□□ 0.8
UPF3A-209ENST00000492270 BEX1Q9HBH7 125 aa20.02■□□□□ 0.8
UPF3A-209ENST00000492270 A0A1W2PPK0 400 aa20.01■□□□□ 0.79
UPF3A-209ENST00000492270 H0YJX3 145 aa20.01■□□□□ 0.79
UPF3A-209ENST00000492270 HSPB6O14558 160 aa20.01■□□□□ 0.79
UPF3A-209ENST00000492270 CLPXO76031 633 aa20.01■□□□□ 0.79
UPF3A-209ENST00000492270 CDK1P06493 297 aa20.01■□□□□ 0.79
UPF3A-209ENST00000492270 CELP19835 753 aa20.01■□□□□ 0.79
UPF3A-209ENST00000492270 ZNF93P35789 620 aaPredicted RBP20.01■□□□□ 0.79
UPF3A-209ENST00000492270 PTGFRP43088 359 aa20.01■□□□□ 0.79
UPF3A-209ENST00000492270 RIPK1Q13546 671 aa20.01■□□□□ 0.79
UPF3A-209ENST00000492270 RSU1Q15404 277 aa20.01■□□□□ 0.79
UPF3A-209ENST00000492270 LY6EQ16553 131 aa20.01■□□□□ 0.79
UPF3A-209ENST00000492270 LRRC75BQ2VPJ9 315 aa20.01■□□□□ 0.79
UPF3A-209ENST00000492270 ZNF626Q68DY1 528 aa20.01■□□□□ 0.79
UPF3A-209ENST00000492270 DHRS7BQ6IAN0 325 aaPredicted RBP20.01■□□□□ 0.79
UPF3A-209ENST00000492270 ASCL4Q6XD76 172 aa20.01■□□□□ 0.79
UPF3A-209ENST00000492270 Q6ZSV7 163 aa20.01■□□□□ 0.79
UPF3A-209ENST00000492270 CHST4Q8NCG5 386 aa20.01■□□□□ 0.79
UPF3A-209ENST00000492270 PPIL3Q9H2H8 161 aaKnown RBP20.01■□□□□ 0.79
UPF3A-209ENST00000492270 PAK1IP1Q9NWT1 392 aaPredicted RBP20.01■□□□□ 0.79
UPF3A-209ENST00000492270 ZNF581Q9P0T4 197 aa20.01■□□□□ 0.79
UPF3A-209ENST00000492270 TRBV5-7A0A0A0MS05 114 aa20■□□□□ 0.79
UPF3A-209ENST00000492270 FAM90A8PA6NJQ4 464 aa20■□□□□ 0.79
UPF3A-209ENST00000492270 PTGES3LE9PB15 166 aa20■□□□□ 0.79
UPF3A-209ENST00000492270 HTR3BO95264 441 aa20■□□□□ 0.79
UPF3A-209ENST00000492270 SRSF4Q08170 494 aaKnown RBP20■□□□□ 0.79
UPF3A-209ENST00000492270 PLA1AQ53H76 456 aa20■□□□□ 0.79
UPF3A-209ENST00000492270 OLFML2AQ68BL7 652 aa20■□□□□ 0.79
UPF3A-209ENST00000492270 BAIAP2L2Q6UXY1 529 aa20■□□□□ 0.79
UPF3A-209ENST00000492270 OR11H6Q8NGC7 330 aa20■□□□□ 0.79
UPF3A-209ENST00000492270 OR51T1Q8NGJ9 327 aa20■□□□□ 0.79
UPF3A-209ENST00000492270 WFDC12Q8WWY7 111 aa20■□□□□ 0.79
UPF3A-209ENST00000492270 ZNF184Q99676 751 aaPredicted RBP20■□□□□ 0.79
UPF3A-209ENST00000492270 ING4Q9UNL4 249 aa20■□□□□ 0.79
UPF3A-209ENST00000492270 UBE2J1Q9Y385 318 aaPredicted RBP20■□□□□ 0.79
UPF3A-209ENST00000492270 SESN1Q9Y6P5 492 aa20■□□□□ 0.79
UPF3A-209ENST00000492270 CLPSL1A2RUU4 121 aa19.99■□□□□ 0.79
UPF3A-209ENST00000492270 CSN2P05814 226 aa19.99■□□□□ 0.79
UPF3A-209ENST00000492270 FSTP19883 344 aa19.99■□□□□ 0.79
UPF3A-209ENST00000492270 DYNC1I2Q13409 638 aaKnown RBP19.99■□□□□ 0.79
UPF3A-209ENST00000492270 KRBOX4Q5JUW0 171 aa19.99■□□□□ 0.79
UPF3A-209ENST00000492270 PRAMEF5Q5TYX0 476 aa19.99■□□□□ 0.79
UPF3A-209ENST00000492270 Q8NFD4 153 aa19.99■□□□□ 0.79
UPF3A-209ENST00000492270 LINC01006Q8NI28 216 aa19.99■□□□□ 0.79
UPF3A-209ENST00000492270 ERGIC3Q9Y282 383 aa19.99■□□□□ 0.79
UPF3A-209ENST00000492270 PKD1L1Q8TDX9 2849 aa19.98■□□□□ 0.79
UPF3A-209ENST00000492270 TRGV10A0A0A0MS01 117 aa19.98■□□□□ 0.79
UPF3A-209ENST00000492270 IGHV2-26A0A0B4J1V2 119 aa19.98■□□□□ 0.79
UPF3A-209ENST00000492270 TRAV24A0A0B4J272 114 aa19.98■□□□□ 0.79
UPF3A-209ENST00000492270 A0A1B0GUS0 222 aa19.98■□□□□ 0.79
UPF3A-209ENST00000492270 ODAMA1E959 279 aa19.98■□□□□ 0.79
UPF3A-209ENST00000492270 GPX5O75715 221 aa19.98■□□□□ 0.79
UPF3A-209ENST00000492270 GDNFP39905 211 aa19.98■□□□□ 0.79
UPF3A-209ENST00000492270 IL13RA2Q14627 380 aa19.98■□□□□ 0.79
UPF3A-209ENST00000492270 PAN3Q58A45 887 aaKnown RBP19.98■□□□□ 0.79
UPF3A-209ENST00000492270 DERL3Q96Q80 235 aa19.98■□□□□ 0.79
UPF3A-209ENST00000492270 SLITRK2Q9H156 845 aa19.98■□□□□ 0.79
UPF3A-209ENST00000492270 TMEM133Q9H2Q1 129 aa19.98■□□□□ 0.79
UPF3A-209ENST00000492270 TBL2Q9Y4P3 447 aaKnown RBP19.98■□□□□ 0.79
UPF3A-209ENST00000492270 FUOMA2VDF0 154 aa19.97■□□□□ 0.79
UPF3A-209ENST00000492270 FAM172BPA6NC97 362 aa19.97■□□□□ 0.79
UPF3A-209ENST00000492270 SGMS2Q8NHU3 365 aa19.97■□□□□ 0.79
UPF3A-209ENST00000492270 PIFOQ8TCI5 191 aa19.97■□□□□ 0.79
UPF3A-209ENST00000492270 CORO2AQ92828 525 aa19.97■□□□□ 0.79
UPF3A-209ENST00000492270 OR5M11Q96RB7 305 aa19.97■□□□□ 0.79
UPF3A-209ENST00000492270 METTL9Q9H1A3 318 aa19.97■□□□□ 0.79
UPF3A-209ENST00000492270 GAL3ST2Q9H3Q3 398 aa19.97■□□□□ 0.79
UPF3A-209ENST00000492270 IL36GQ9NZH8 169 aa19.97■□□□□ 0.79
UPF3A-209ENST00000492270 CKLFQ9UBR5 152 aa19.97■□□□□ 0.79
UPF3A-209ENST00000492270 RNF114Q9Y508 228 aa19.97■□□□□ 0.79
UPF3A-209ENST00000492270 A0A1W2PP11 408 aa19.96■□□□□ 0.79
UPF3A-209ENST00000492270 PIN1P1O15428 100 aa19.96■□□□□ 0.79
UPF3A-209ENST00000492270 MAS1P04201 325 aa19.96■□□□□ 0.79
UPF3A-209ENST00000492270 CD1AP06126 327 aa19.96■□□□□ 0.79
UPF3A-209ENST00000492270 JUNBP17275 347 aaPredicted RBP19.96■□□□□ 0.79
UPF3A-209ENST00000492270 SERPINA2P20848 420 aa19.96■□□□□ 0.79
UPF3A-209ENST00000492270 MYF6P23409 242 aa19.96■□□□□ 0.79
UPF3A-209ENST00000492270 CDK2P24941 298 aa19.96■□□□□ 0.79
UPF3A-209ENST00000492270 TGFBR2P37173 567 aa19.96■□□□□ 0.79
UPF3A-209ENST00000492270 KRTAP10-3P60369 221 aa19.96■□□□□ 0.79
UPF3A-209ENST00000492270 INSL4Q14641 139 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms