RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 KLHL22Q53GT1 634 aa6.66□□□□□ -1.34
LSM2-213ENST00000491421 ARSJQ5FYB0 599 aaPredicted RBP6.66□□□□□ -1.34
LSM2-213ENST00000491421 LPCAT4Q643R3 524 aa6.66□□□□□ -1.34
LSM2-213ENST00000491421 HIST2H2BDQ6DRA6 164 aa6.66□□□□□ -1.34
LSM2-213ENST00000491421 OR52W1Q6IF63 320 aa6.66□□□□□ -1.34
LSM2-213ENST00000491421 CCBE1Q6UXH8 406 aaPredicted RBP6.66□□□□□ -1.34
LSM2-213ENST00000491421 Q8N2B8 174 aa6.66□□□□□ -1.34
LSM2-213ENST00000491421 ABHD12Q8N2K0 398 aa6.66□□□□□ -1.34
LSM2-213ENST00000491421 PARP16Q8N5Y8 322 aa6.66□□□□□ -1.34
LSM2-213ENST00000491421 CHST4Q8NCG5 386 aa6.66□□□□□ -1.34
LSM2-213ENST00000491421 ZNF555Q8NEP9 628 aa6.66□□□□□ -1.34
LSM2-213ENST00000491421 OR52I1Q8NGK6 324 aa6.66□□□□□ -1.34
LSM2-213ENST00000491421 HAVCR2Q8TDQ0 301 aa6.66□□□□□ -1.34
LSM2-213ENST00000491421 APH1BQ8WW43 257 aa6.66□□□□□ -1.34
LSM2-213ENST00000491421 CFHR4Q92496 578 aa6.66□□□□□ -1.34
LSM2-213ENST00000491421 CPNE2Q96FN4 548 aaPredicted RBP6.66□□□□□ -1.34
LSM2-213ENST00000491421 ZNF649Q9BS31 505 aa6.66□□□□□ -1.34
LSM2-213ENST00000491421 ING3Q9NXR8 418 aa6.66□□□□□ -1.34
LSM2-213ENST00000491421 A0A0G2JK05 382 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 ODAMA1E959 279 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 FAM172BPA6NC97 362 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 PRSS47A8MTI9 375 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 H3BUI4 141 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 SLC33A1O00400 549 aaPredicted RBP6.65□□□□□ -1.34
LSM2-213ENST00000491421 DEGS1O15121 323 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 MAGEB3O15480 346 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 ALX3O95076 343 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 BAG2O95816 211 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 CSN2P05814 226 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 LIMS3P0CW19 117 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 LIMS4P0CW20 117 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 RAB3AP20336 220 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 CDK2P24941 298 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 LMO1P25800 156 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 PTGFRP43088 359 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 SOX2P48431 317 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 ARHGDIBP52566 201 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 GTF2A1P52655 376 aaPredicted RBP6.65□□□□□ -1.34
LSM2-213ENST00000491421 ZP1P60852 638 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 HABP2Q14520 560 aaPredicted RBP6.65□□□□□ -1.34
LSM2-213ENST00000491421 ATXN7L3Q14CW9 347 aaPredicted RBP6.65□□□□□ -1.34
LSM2-213ENST00000491421 SMN1Q16637 294 aaKnown RBP6.65□□□□□ -1.34
LSM2-213ENST00000491421 ZSCAN26Q16670 478 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 KRBOX4Q5JUW0 171 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 ZNF691Q5VV52 312 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 Q6P435 159 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 BAIAP2L2Q6UXY1 529 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 HEPN1Q6WQI6 88 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 RTN4RL2Q86UN3 420 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 OR4D6Q8NGJ1 314 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 OR4P4Q8NGL7 312 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 ZNF596Q8TC21 504 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 CORO2AQ92828 525 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 STMN2Q93045 179 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 RDH12Q96NR8 316 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 GPER1Q99527 375 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 PRSS22Q9GZN4 317 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 SERTAD4Q9NUC0 356 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 MRPS18AQ9NVS2 196 aaKnown RBP6.65□□□□□ -1.34
LSM2-213ENST00000491421 SMPD3Q9NY59 655 aaPredicted RBP6.65□□□□□ -1.34
LSM2-213ENST00000491421 TAS2R3Q9NYW6 316 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 DPM3Q9P2X0 92 aa6.65□□□□□ -1.34
LSM2-213ENST00000491421 WNK1Q9H4A3 2382 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 H0YJX3 145 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 GABRPO00591 440 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 HSPB6O14558 160 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 TOR1AO14656 332 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 FBXO24O75426 580 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 WBP4O75554 376 aaKnown RBP6.64□□□□□ -1.35
LSM2-213ENST00000491421 ALDOBP05062 364 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 CD2P06729 351 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 DCKP27707 260 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 BRS3P32247 399 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 GDNFP39905 211 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 MTNR1BP49286 362 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 BDH1Q02338 343 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 CDK5R1Q15078 307 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 CCDC58Q4VC31 144 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 PAN3Q58A45 887 aaKnown RBP6.64□□□□□ -1.35
LSM2-213ENST00000491421 TMPRSS11AQ6ZMR5 421 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 SATL1Q86VE3 508 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 C1QL4Q86Z23 238 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 PXT1Q8NFP0 134 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 OR51A2Q8NGJ7 313 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 GPR148Q8TDV2 347 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 TNFAIP8L1Q8WVP5 186 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 CAPSLQ8WWF8 208 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 RGP1Q92546 391 aaPredicted RBP6.64□□□□□ -1.35
LSM2-213ENST00000491421 COQ2Q96H96 371 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 OR5M11Q96RB7 305 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 NR1H4Q96RI1 486 aaPredicted RBP6.64□□□□□ -1.35
LSM2-213ENST00000491421 JAM3Q9BX67 310 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 FAM192AQ9GZU8 254 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 PPIL3Q9H2H8 161 aaKnown RBP6.64□□□□□ -1.35
LSM2-213ENST00000491421 FGF20Q9NP95 211 aaPredicted RBP6.64□□□□□ -1.35
LSM2-213ENST00000491421 TAS2R4Q9NYW5 299 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 OR6C3Q9NZP0 311 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 PFDN2Q9UHV9 154 aa6.64□□□□□ -1.35
LSM2-213ENST00000491421 TGP01266 2768 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 MEIKINA0A087WXM9 373 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms