RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 GPR179Q6PRD1 2367 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 NKX2-6A6NCS4 301 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 ZNF732B4DXR9 585 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 DTYMKP23919 212 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 CEACAM6P40199 344 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 NOVA1P51513 510 aaKnown RBP16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 RND2P52198 227 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 C17orf67Q0P5P2 114 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 FOXO1Q12778 655 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 MYBPHQ13203 477 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 JOSD1Q15040 202 aaPredicted RBP16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 TAF9Q16594 264 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 TGIF2LXQ8IUE1 241 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 SUMF1Q8NBK3 374 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 OR5C1Q8NGR4 320 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 PLEKHF2Q9H8W4 249 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 ZNF581Q9P0T4 197 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 PITPNC1Q9UKF7 332 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 V9GYS6 101 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 RTTNQ86VV8 2226 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 LILRA5A6NI73 299 aa16.77■□□□□ 0.28
SNAPC3-206ENST00000490969 A8MWP6 167 aa16.77■□□□□ 0.28
SNAPC3-206ENST00000490969 EFNA2O43921 213 aa16.77■□□□□ 0.28
SNAPC3-206ENST00000490969 FOLR1P15328 257 aa16.77■□□□□ 0.28
SNAPC3-206ENST00000490969 FUT3P21217 361 aa16.77■□□□□ 0.28
SNAPC3-206ENST00000490969 USF2Q15853 346 aaPredicted RBP16.77■□□□□ 0.28
SNAPC3-206ENST00000490969 TMEM252Q8N6L7 170 aa16.77■□□□□ 0.28
SNAPC3-206ENST00000490969 PIGLQ9Y2B2 252 aa16.77■□□□□ 0.28
SNAPC3-206ENST00000490969 ASCC3Q8N3C0 2202 aaKnown RBP16.77■□□□□ 0.28
SNAPC3-206ENST00000490969 TCAPO15273 167 aa16.77■□□□□ 0.28
SNAPC3-206ENST00000490969 CDS2O95674 445 aa16.77■□□□□ 0.28
SNAPC3-206ENST00000490969 FGF7P21781 194 aa16.77■□□□□ 0.28
SNAPC3-206ENST00000490969 CD200P41217 278 aa16.77■□□□□ 0.28
SNAPC3-206ENST00000490969 FBXW4P57775 412 aa16.77■□□□□ 0.28
SNAPC3-206ENST00000490969 CHAF1BQ13112 559 aa16.77■□□□□ 0.28
SNAPC3-206ENST00000490969 GNPNAT1Q96EK6 184 aaPredicted RBP16.77■□□□□ 0.28
SNAPC3-206ENST00000490969 TP53RKQ96S44 253 aa16.77■□□□□ 0.28
SNAPC3-206ENST00000490969 ZNF160Q9HCG1 818 aa16.77■□□□□ 0.28
SNAPC3-206ENST00000490969 GLRX2Q9NS18 164 aa16.77■□□□□ 0.28
SNAPC3-206ENST00000490969 CLDN34H7C241 214 aa16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 TRAF3IP2O43734 574 aaPredicted RBP16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 NKX2-1P43699 371 aaPredicted RBP16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 RAB4BP61018 213 aa16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 RUNX1Q01196 453 aa16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 KCNMB1Q16558 191 aa16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 DYRK2Q92630 601 aa16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 LYRM2Q9NU23 88 aaPredicted RBP16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 TMEM242Q9NWH2 141 aa16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 SHANK1Q9Y566 2161 aa16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 PROB1E7EW31 1015 aa16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 DVL1O14640 695 aa16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 SSSCA1O60232 199 aa16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 HBE1P02100 147 aa16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 OPN1LWP04000 364 aa16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 SNRPCP09234 159 aaKnown RBP16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 GZMBP10144 247 aa16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 TLE4Q04727 773 aa16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 LYSMD4Q5XG99 296 aa16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 OR10G4Q8NGN3 311 aa16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 CALHM2Q9HA72 323 aa16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 NCOA6Q14686 2063 aaPredicted RBP16.76■□□□□ 0.27
SNAPC3-206ENST00000490969 LOC102723971A0A1B0GUV8 181 aa16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 F5H5K5 113 aa16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 EPHA1P21709 976 aa16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 CTSSP25774 331 aa16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 DYNLT3P51808 116 aa16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 SUMO3P55854 103 aaPredicted RBP16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 OR8G1Q15617 311 aa16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 PMS2CLQ68D20 193 aa16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 TMEM183AQ8IXX5 376 aa16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 CMTM1Q8IZ96 169 aa16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 CCDC71LQ8N9Z2 235 aa16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 MOB3AQ96BX8 217 aa16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 NOL4LQ96MY1 436 aaPredicted RBP16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 TNRC6BQ9UPQ9 1833 aaKnown RBP16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 IGHV1OR21-1A0A087WYE8 117 aa16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 A0A0U1RQV5 110 aa16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 A0A1B0GU03 582 aa16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 PATE3B3GLJ2 98 aa16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 GEMIN2O14893 280 aaKnown RBP16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 ANGPTL7O43827 346 aa16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 CYB5R3P00387 301 aaPredicted RBP16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 OR5L2Q8NGL0 311 aa16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 NDUFAF3Q9BU61 184 aa16.75■□□□□ 0.27
SNAPC3-206ENST00000490969 CST7O76096 145 aa16.74■□□□□ 0.27
SNAPC3-206ENST00000490969 RAB11AP62491 216 aa16.74■□□□□ 0.27
SNAPC3-206ENST00000490969 PNRC1Q12796 327 aaPredicted RBP16.74■□□□□ 0.27
SNAPC3-206ENST00000490969 FAM90A2PQ658T7 463 aa16.74■□□□□ 0.27
SNAPC3-206ENST00000490969 LANCL3Q6ZV70 420 aa16.74■□□□□ 0.27
SNAPC3-206ENST00000490969 C20orf196Q8IYI0 205 aa16.74■□□□□ 0.27
SNAPC3-206ENST00000490969 ZNF664Q8N3J9 261 aa16.74■□□□□ 0.27
SNAPC3-206ENST00000490969 OR6X1Q8NH79 312 aa16.74■□□□□ 0.27
SNAPC3-206ENST00000490969 RNASEH2CQ8TDP1 164 aaKnown RBP16.74■□□□□ 0.27
SNAPC3-206ENST00000490969 RAB24Q969Q5 203 aa16.74■□□□□ 0.27
SNAPC3-206ENST00000490969 GPR87Q9BY21 358 aa16.74■□□□□ 0.27
SNAPC3-206ENST00000490969 MAGT1Q9H0U3 335 aa16.74■□□□□ 0.27
SNAPC3-206ENST00000490969 METTL9Q9H1A3 318 aa16.74■□□□□ 0.27
SNAPC3-206ENST00000490969 HIPK2Q9H2X6 1198 aa16.74■□□□□ 0.27
SNAPC3-206ENST00000490969 DKKL1Q9UK85 242 aa16.74■□□□□ 0.27
SNAPC3-206ENST00000490969 TRBV24-1A0A075B6N3 115 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms