RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 NEURL2Q9BR09 285 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 CDCA4Q9BXL8 241 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 NAA50Q9GZZ1 169 aaKnown RBP8.47□□□□□ -1.05
TTC28-207ENST00000490475 ZCCHC4Q9H5U6 513 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 MTCH1Q9NZJ7 389 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 DHDHQ9UQ10 334 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 ZNF281Q9Y2X9 895 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 TET2Q6N021 2002 aaPredicted RBP8.46□□□□□ -1.05
TTC28-207ENST00000490475 RFPL4AA6NLU0 287 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 RFPL4AL1F8VTS6 287 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 H3BUI4 141 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 NOS1APO75052 506 aaPredicted RBP8.46□□□□□ -1.06
TTC28-207ENST00000490475 CALCBP10092 127 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 SELLP14151 372 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 PRKACBP22694 351 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 AZGP1P25311 298 aaKnown RBP8.46□□□□□ -1.06
TTC28-207ENST00000490475 GABRA5P31644 462 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 RBP2P50120 134 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 CAPZA1P52907 286 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 LGALS4P56470 323 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 WNT4P56705 351 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 ZNF45Q02386 682 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 IL24Q13007 206 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 CNN3Q15417 329 aaKnown RBP8.46□□□□□ -1.06
TTC28-207ENST00000490475 RNLSQ5VYX0 342 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 ACP7Q6ZNF0 438 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 SLC25A26Q70HW3 274 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 SERPINA12Q8IW75 414 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 PARP16Q8N5Y8 322 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 CD177Q8N6Q3 437 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 DNAAF1Q8NEP3 725 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 OR5D14Q8NGL3 314 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 OR4C13Q8NGP0 309 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 OR13C5Q8NGS8 318 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 OR2T6Q8NHC8 308 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 GPR148Q8TDV2 347 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 CHAC2Q8WUX2 184 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 TAF15Q92804 592 aaKnown RBP eCLIP8.46□□□□□ -1.06
TTC28-207ENST00000490475 SLAMF9Q96A28 289 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 RFT1Q96AA3 541 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 ORAI1Q96D31 301 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 SMIM19Q96E16 107 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 OR5M11Q96RB7 305 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 NRIP2Q9BQI9 281 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 PKIBQ9C010 78 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 MEGF9Q9H1U4 602 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 MAB21L2Q9Y586 359 aa8.46□□□□□ -1.06
TTC28-207ENST00000490475 MYL12BO14950 172 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 MAGEB3O15480 346 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 NXPH2O95156 264 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 MT-ND2P03891 347 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 CSF1P09603 554 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 CELP19835 753 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 PRDX2P32119 198 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 KIR2DS4P43632 304 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 POU3F4P49335 361 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 CEBPDP49716 269 aaPredicted RBP8.45□□□□□ -1.06
TTC28-207ENST00000490475 ERVFRD-1P60508 538 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 ERVK11-1P61568 191 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 RPS11P62280 158 aaKnown RBP eCLIP8.45□□□□□ -1.06
TTC28-207ENST00000490475 RPL31P62899 125 aaKnown RBP8.45□□□□□ -1.06
TTC28-207ENST00000490475 SRSF4Q08170 494 aaKnown RBP8.45□□□□□ -1.06
TTC28-207ENST00000490475 PDZK1IP1Q13113 114 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 IRF3Q14653 427 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 SPCS2Q15005 226 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 HERPUD1Q15011 391 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 LRRC75BQ2VPJ9 315 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 TIMM50Q3ZCQ8 353 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 CRIP3Q6Q6R5 217 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 FAM185AQ8N0U4 392 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 ZNRF1Q8ND25 227 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 OPALINQ96PE5 141 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 SSX3Q99909 188 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 NPFFR1Q9GZQ6 430 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 PPA2Q9H2U2 334 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 ACOT13Q9NPJ3 140 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 CCDC59Q9P031 241 aaKnown RBP8.45□□□□□ -1.06
TTC28-207ENST00000490475 OR14J1Q9UGF5 321 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 DAPK2Q9UIK4 370 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 ZNF222Q9UK12 451 aa8.45□□□□□ -1.06
TTC28-207ENST00000490475 IGKV1-12A0A0C4DH73 117 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 TRBV5-5A0A0J9YX44 114 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 A0A1W2PPK0 400 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 H3BUX3 64 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 SULT1B1O43704 296 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 ANGPTL7O43827 346 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 PTTG1O95997 202 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 IGKV1D-12P01611 117 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 RBP4P02753 201 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 HCKP08631 526 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 BCL3P20749 454 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 ETV6P41212 452 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 MAP2K4P45985 399 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 NPBWR2P48146 333 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 KLRD1Q13241 179 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 SLC35E4Q6ICL7 350 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 ZNF529Q6P280 563 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 LHFPL2Q6ZUX7 228 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 MKXQ8IYA7 352 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 MFSD4AQ8N468 514 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms