RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 ATXN7L3Q14CW9 347 aaPredicted RBP14.71□□□□□ -0.05
COL9A3-214ENST00000490398 UTF1Q5T230 341 aa14.71□□□□□ -0.05
COL9A3-214ENST00000490398 ELP2Q6IA86 826 aa14.71□□□□□ -0.05
COL9A3-214ENST00000490398 BEND2Q8NDZ0 799 aa14.71□□□□□ -0.05
COL9A3-214ENST00000490398 DYRK2Q92630 601 aa14.71□□□□□ -0.05
COL9A3-214ENST00000490398 TMEM138Q9NPI0 162 aa14.71□□□□□ -0.05
COL9A3-214ENST00000490398 GLS2Q9UI32 602 aa14.71□□□□□ -0.05
COL9A3-214ENST00000490398 ING4Q9UNL4 249 aa14.71□□□□□ -0.05
COL9A3-214ENST00000490398 LINC00312Q9Y6C7 94 aa14.71□□□□□ -0.05
COL9A3-214ENST00000490398 PKD1L1Q8TDX9 2849 aa14.7□□□□□ -0.06
COL9A3-214ENST00000490398 TRAV24A0A0B4J272 114 aa14.7□□□□□ -0.06
COL9A3-214ENST00000490398 MEGF11A6BM72 1044 aa14.7□□□□□ -0.06
COL9A3-214ENST00000490398 ODF3BA8MYP8 253 aa14.7□□□□□ -0.06
COL9A3-214ENST00000490398 H3BUX3 64 aa14.7□□□□□ -0.06
COL9A3-214ENST00000490398 HSPB6O14558 160 aa14.7□□□□□ -0.06
COL9A3-214ENST00000490398 MAGEB3O15480 346 aa14.7□□□□□ -0.06
COL9A3-214ENST00000490398 GPX5O75715 221 aa14.7□□□□□ -0.06
COL9A3-214ENST00000490398 HTR3BO95264 441 aa14.7□□□□□ -0.06
COL9A3-214ENST00000490398 JUNBP17275 347 aaPredicted RBP14.7□□□□□ -0.06
COL9A3-214ENST00000490398 MYF6P23409 242 aa14.7□□□□□ -0.06
COL9A3-214ENST00000490398 ERP29P30040 261 aaKnown RBP14.7□□□□□ -0.06
COL9A3-214ENST00000490398 ZNF93P35789 620 aaPredicted RBP14.7□□□□□ -0.06
COL9A3-214ENST00000490398 GP2P55259 537 aaKnown RBP14.7□□□□□ -0.06
COL9A3-214ENST00000490398 PPP3R1P63098 170 aa14.7□□□□□ -0.06
COL9A3-214ENST00000490398 RIPK1Q13546 671 aa14.7□□□□□ -0.06
COL9A3-214ENST00000490398 LY6EQ16553 131 aa14.7□□□□□ -0.06
COL9A3-214ENST00000490398 Q8NFD4 153 aa14.7□□□□□ -0.06
COL9A3-214ENST00000490398 OR51T1Q8NGJ9 327 aa14.7□□□□□ -0.06
COL9A3-214ENST00000490398 CYYR1Q96J86 154 aa14.7□□□□□ -0.06
COL9A3-214ENST00000490398 ZNF184Q99676 751 aaPredicted RBP14.7□□□□□ -0.06
COL9A3-214ENST00000490398 DPAGT1Q9H3H5 408 aa14.7□□□□□ -0.06
COL9A3-214ENST00000490398 RHOFQ9HBH0 211 aa14.7□□□□□ -0.06
COL9A3-214ENST00000490398 VPREB3Q9UKI3 123 aa14.7□□□□□ -0.06
COL9A3-214ENST00000490398 hCG_1809904A0A1W2PP81 198 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 A0A1W2PPE2 198 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 A0A1W2PR64 198 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 A0A1W2PRV1 198 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 FAM90A8PA6NJQ4 464 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 ARG1P05089 322 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 TGFBR2P37173 567 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 KRTAP10-3P60369 221 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 SLC35A2P78381 396 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 IRF3Q14653 427 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 RSU1Q15404 277 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 PLA1AQ53H76 456 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 PRAMEF5Q5TYX0 476 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 RNLSQ5VYX0 342 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 IZUMO2Q6UXV1 221 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 PLPPR1Q8TBJ4 325 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 PIFOQ8TCI5 191 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 DERL3Q96Q80 235 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 SSX3Q99909 188 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 CDCA4Q9BXL8 241 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 MEGF9Q9H1U4 602 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 ERGIC3Q9Y282 383 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 DSCAML1Q8TD84 2053 aa14.69□□□□□ -0.06
COL9A3-214ENST00000490398 ODAMA1E959 279 aa14.68□□□□□ -0.06
COL9A3-214ENST00000490398 FAM172BPA6NC97 362 aa14.68□□□□□ -0.06
COL9A3-214ENST00000490398 NDUFA7O95182 113 aa14.68□□□□□ -0.06
COL9A3-214ENST00000490398 RBP4P02753 201 aa14.68□□□□□ -0.06
COL9A3-214ENST00000490398 CRYBA1P05813 215 aa14.68□□□□□ -0.06
COL9A3-214ENST00000490398 FSTP19883 344 aa14.68□□□□□ -0.06
COL9A3-214ENST00000490398 RAB13P51153 203 aa14.68□□□□□ -0.06
COL9A3-214ENST00000490398 TAS2R43P59537 309 aa14.68□□□□□ -0.06
COL9A3-214ENST00000490398 KRBOX4Q5JUW0 171 aa14.68□□□□□ -0.06
COL9A3-214ENST00000490398 FAM27D1Q5T7N8 215 aa14.68□□□□□ -0.06
COL9A3-214ENST00000490398 ZNF626Q68DY1 528 aa14.68□□□□□ -0.06
COL9A3-214ENST00000490398 Q6ZSV7 163 aa14.68□□□□□ -0.06
COL9A3-214ENST00000490398 TRAPPC6BQ86SZ2 158 aa14.68□□□□□ -0.06
COL9A3-214ENST00000490398 LYPD6Q86Y78 171 aa14.68□□□□□ -0.06
COL9A3-214ENST00000490398 OR11H6Q8NGC7 330 aa14.68□□□□□ -0.06
COL9A3-214ENST00000490398 OR13D1Q8NGV5 346 aa14.68□□□□□ -0.06
COL9A3-214ENST00000490398 PPP1R35Q8TAP8 253 aa14.68□□□□□ -0.06
COL9A3-214ENST00000490398 ANKRD60Q9BZ19 345 aa14.68□□□□□ -0.06
COL9A3-214ENST00000490398 SESN1Q9Y6P5 492 aa14.68□□□□□ -0.06
COL9A3-214ENST00000490398 CLPXO76031 633 aa14.67□□□□□ -0.06
COL9A3-214ENST00000490398 MAS1P04201 325 aa14.67□□□□□ -0.06
COL9A3-214ENST00000490398 CD1AP06126 327 aa14.67□□□□□ -0.06
COL9A3-214ENST00000490398 DYNC1I2Q13409 638 aaKnown RBP14.67□□□□□ -0.06
COL9A3-214ENST00000490398 IL13RA2Q14627 380 aa14.67□□□□□ -0.06
COL9A3-214ENST00000490398 C17orf58Q2M2W7 97 aa14.67□□□□□ -0.06
COL9A3-214ENST00000490398 CHST4Q8NCG5 386 aa14.67□□□□□ -0.06
COL9A3-214ENST00000490398 CORO2AQ92828 525 aa14.67□□□□□ -0.06
COL9A3-214ENST00000490398 MUL1Q969V5 352 aa14.67□□□□□ -0.06
COL9A3-214ENST00000490398 TMEM133Q9H2Q1 129 aa14.67□□□□□ -0.06
COL9A3-214ENST00000490398 DUSP21Q9H596 190 aa14.67□□□□□ -0.06
COL9A3-214ENST00000490398 SCN3BQ9NY72 215 aa14.67□□□□□ -0.06
COL9A3-214ENST00000490398 ST3GAL6Q9Y274 331 aa14.67□□□□□ -0.06
COL9A3-214ENST00000490398 UBE2J1Q9Y385 318 aaPredicted RBP14.67□□□□□ -0.06
COL9A3-214ENST00000490398 MMP24Q9Y5R2 645 aa14.67□□□□□ -0.06
COL9A3-214ENST00000490398 IGHV2-26A0A0B4J1V2 119 aa14.66□□□□□ -0.06
COL9A3-214ENST00000490398 TRAV39A0A0B4J263 110 aa14.66□□□□□ -0.06
COL9A3-214ENST00000490398 GEMIN2O14893 280 aaKnown RBP14.66□□□□□ -0.06
COL9A3-214ENST00000490398 CSN2P05814 226 aa14.66□□□□□ -0.06
COL9A3-214ENST00000490398 SERPINA2P20848 420 aa14.66□□□□□ -0.06
COL9A3-214ENST00000490398 CDK2P24941 298 aa14.66□□□□□ -0.06
COL9A3-214ENST00000490398 LGALS4P56470 323 aa14.66□□□□□ -0.06
COL9A3-214ENST00000490398 LRRC75BQ2VPJ9 315 aa14.66□□□□□ -0.06
COL9A3-214ENST00000490398 PAN3Q58A45 887 aaKnown RBP14.66□□□□□ -0.06
COL9A3-214ENST00000490398 BRICD5Q6PL45 260 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms