RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 OR2Y1Q8NGV0 311 aa7.84□□□□□ -1.15
LSAMP-205ENST00000490035 ABHD1Q96SE0 405 aa7.84□□□□□ -1.15
LSAMP-205ENST00000490035 NEURL2Q9BR09 285 aa7.84□□□□□ -1.15
LSAMP-205ENST00000490035 FAM103A1Q9BTL3 118 aaKnown RBP7.84□□□□□ -1.15
LSAMP-205ENST00000490035 MFNGO00587 321 aa7.84□□□□□ -1.16
LSAMP-205ENST00000490035 SPRY1O43609 319 aaPredicted RBP7.84□□□□□ -1.16
LSAMP-205ENST00000490035 CDAP32320 146 aa7.84□□□□□ -1.16
LSAMP-205ENST00000490035 LSM11P83369 360 aaKnown RBP eCLIP7.84□□□□□ -1.16
LSAMP-205ENST00000490035 CEBPEQ15744 281 aa7.84□□□□□ -1.16
LSAMP-205ENST00000490035 DEFB108BQ8NET1 73 aa7.84□□□□□ -1.16
LSAMP-205ENST00000490035 MISP3Q96FF7 219 aa7.84□□□□□ -1.16
LSAMP-205ENST00000490035 PARP11Q9NR21 331 aa7.84□□□□□ -1.16
LSAMP-205ENST00000490035 MDC1Q14676 2089 aaKnown RBP7.83□□□□□ -1.16
LSAMP-205ENST00000490035 SEC11BP0C7V7 166 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 PI3P19957 117 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 RNF151Q2KHN1 245 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 FOXB2Q5VYV0 432 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 TMEM88Q6PEY1 159 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 OR52B4Q8NGK2 314 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 LRRC3BQ96PB8 259 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 TNFRSF12AQ9NP84 129 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 A6NDN8 102 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 CDK2AP1O14519 115 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 TSPAN7P41732 249 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 UCNP55089 124 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 CLEC9AQ6UXN8 241 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 OR8B3Q8NGG8 313 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 OR8B2Q96RD0 313 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 RAB33BQ9H082 229 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 SYNGR2O43760 224 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 SEMA7AO75326 666 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 PABPC1L2AQ5JQF8 200 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 OLIG3Q7RTU3 272 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 OR10G8Q8NGN5 311 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 MS4A5Q9H3V2 200 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 SLC7A10Q9NS82 523 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 KCNE3Q9Y6H6 103 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 ATP5IP56385 69 aaPredicted RBP7.83□□□□□ -1.16
LSAMP-205ENST00000490035 ABLIM2Q6H8Q1 611 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 ERASQ7Z444 233 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 VSTM2LQ96N03 204 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 SCN10AQ9Y5Y9 1956 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 FCGR3BO75015 233 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 EPHA8P29322 1005 aaPredicted RBP7.83□□□□□ -1.16
LSAMP-205ENST00000490035 ZP4Q12836 540 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 ZNF260Q3ZCT1 412 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 PDZD11Q5EBL8 140 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 SIGIRRQ6IA17 410 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 RELL2Q8NC24 303 aaPredicted RBP7.83□□□□□ -1.16
LSAMP-205ENST00000490035 SLC25A33Q9BSK2 321 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 FAAP20Q6NZ36 180 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 ATG4DQ86TL0 474 aaPredicted RBP7.83□□□□□ -1.16
LSAMP-205ENST00000490035 Q8WTZ3 238 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 TMPRSS13Q9BYE2 586 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 LRRC37AA6NMS7 1700 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 CDRT15L2A8MXV6 281 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 C5orf67F2Z3F1 127 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 RER1O15258 196 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 MMP16P51512 607 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 FNDC7Q5VTL7 733 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 DEFB123Q8N688 67 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 HEXA-AS1Q9H8Q6 139 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 TMEM30AQ9NV96 361 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 PITPNC1Q9UKF7 332 aa7.83□□□□□ -1.16
LSAMP-205ENST00000490035 AVPR2P30518 371 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 CSF2RBP32927 897 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 MPLP40238 635 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 BSXQ3C1V8 233 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 GNRHR2Q96P88 292 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 CHST5Q9GZS9 411 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 ZNF768Q9H5H4 540 aaKnown RBP7.82□□□□□ -1.16
LSAMP-205ENST00000490035 CASP8AP2Q9UKL3 1982 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 TMEM238LA0A1B0GVL6 79 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 A6NJY4 79 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 DNASE2O00115 360 aaPredicted RBP7.82□□□□□ -1.16
LSAMP-205ENST00000490035 CD3EP07766 207 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 FAM87AP0C7U9 286 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 SRP14P37108 136 aaKnown RBP7.82□□□□□ -1.16
LSAMP-205ENST00000490035 FAM3BP58499 235 aaPredicted RBP7.82□□□□□ -1.16
LSAMP-205ENST00000490035 D2HGDHQ8N465 521 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 COL25A1Q9BXS0 654 aaPredicted RBP7.82□□□□□ -1.16
LSAMP-205ENST00000490035 WDR13Q9H1Z4 485 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 FAM186AA6NE01 2351 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 FAM90A10PA6NDY2 464 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 FAM90A18PA6NE21 464 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 FAM90A16PA6NEW6 464 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 MFSD2BA6NFX1 497 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 FAM90A20PA6NIJ5 464 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 FAM90A8PA6NJQ4 464 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 LIPT2A6NK58 231 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 FAM90A7PA6NKC0 464 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 FAM90A22PA8MWA6 464 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 FAM90A12PA8MX19 464 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 FAM90A5PA8MXJ8 464 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 FAM90A23PA8MXZ1 464 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 KLK10O43240 276 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 WNT1P04628 370 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 FAM90A15PP0C7V4 464 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 FAM90A13PP0C7W8 464 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 FAM90A14PP0C7W9 464 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms