RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 RFT1Q96AA3 541 aa12.59□□□□□ -0.39
PLOD3-216ENST00000489927 FGGYQ96C11 551 aa12.59□□□□□ -0.39
PLOD3-216ENST00000489927 OPALINQ96PE5 141 aa12.59□□□□□ -0.39
PLOD3-216ENST00000489927 B9D2Q9BPU9 175 aa12.59□□□□□ -0.39
PLOD3-216ENST00000489927 ING3Q9NXR8 418 aa12.59□□□□□ -0.39
PLOD3-216ENST00000489927 PCDHGB5Q9Y5G0 923 aa12.59□□□□□ -0.39
PLOD3-216ENST00000489927 A0A087X0M5 115 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 A0A1B0GX30 115 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 KDM4BO94953 1096 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 CCDC159P0C7I6 412 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 ZNF20P17024 532 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 ATP6V1E1P36543 226 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 PRRX1P54821 245 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 ZNF85Q03923 595 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 SCN1BQ07699 218 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 C17orf58Q2M2W7 97 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 TMEM244Q5VVB8 128 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 CCDC144NLQ6NUI1 221 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 OR51D1Q8NGF3 324 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 OR5D18Q8NGL1 313 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 SPSB1Q96BD6 273 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 COQ2Q96H96 371 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 WWC2-AS2Q96NR7 200 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 SPACA5Q96QH8 159 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 GPR61Q9BZJ8 451 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 COMMD4Q9H0A8 199 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 MOB4Q9Y3A3 225 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 HSPE1-MOB4S4R3N1 261 aa12.58□□□□□ -0.4
PLOD3-216ENST00000489927 OOSP1A8MZH6 123 aa12.57□□□□□ -0.4
PLOD3-216ENST00000489927 CSN2P05814 226 aa12.57□□□□□ -0.4
PLOD3-216ENST00000489927 FAM106CPP0CH98 169 aa12.57□□□□□ -0.4
PLOD3-216ENST00000489927 ZNF44P15621 663 aa12.57□□□□□ -0.4
PLOD3-216ENST00000489927 POLR2IP36954 125 aaKnown RBP12.57□□□□□ -0.4
PLOD3-216ENST00000489927 THBS3P49746 956 aa12.57□□□□□ -0.4
PLOD3-216ENST00000489927 RPL23AP62750 156 aaKnown RBP12.57□□□□□ -0.4
PLOD3-216ENST00000489927 ATXN7L3Q14CW9 347 aaPredicted RBP12.57□□□□□ -0.4
PLOD3-216ENST00000489927 ATP6AP1Q15904 470 aa12.57□□□□□ -0.4
PLOD3-216ENST00000489927 KRBOX4Q5JUW0 171 aa12.57□□□□□ -0.4
PLOD3-216ENST00000489927 C18orf65Q6ZTR6 163 aa12.57□□□□□ -0.4
PLOD3-216ENST00000489927 OR2G2Q8NGZ5 317 aa12.57□□□□□ -0.4
PLOD3-216ENST00000489927 NOL4LQ96MY1 436 aaPredicted RBP12.57□□□□□ -0.4
PLOD3-216ENST00000489927 MBOAT4Q96T53 435 aa12.57□□□□□ -0.4
PLOD3-216ENST00000489927 CIB1Q99828 191 aa12.57□□□□□ -0.4
PLOD3-216ENST00000489927 GABARAPL1Q9H0R8 117 aa12.57□□□□□ -0.4
PLOD3-216ENST00000489927 PPIL3Q9H2H8 161 aaKnown RBP12.57□□□□□ -0.4
PLOD3-216ENST00000489927 FRRS1LQ9P0K9 344 aa12.57□□□□□ -0.4
PLOD3-216ENST00000489927 FAM90A18PA6NE21 464 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 FAM90A16PA6NEW6 464 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 FAM90A20PA6NIJ5 464 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 ZNF729A6NN14 1252 aaPredicted RBP12.56□□□□□ -0.4
PLOD3-216ENST00000489927 FAM90A9PA6NNJ1 464 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 FAM90A12PA8MX19 464 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 FAM90A5PA8MXJ8 464 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 SLC33A1O00400 549 aaPredicted RBP12.56□□□□□ -0.4
PLOD3-216ENST00000489927 ISG15P05161 165 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 SNRNP70P08621 437 aaKnown RBP12.56□□□□□ -0.4
PLOD3-216ENST00000489927 FAM90A15PP0C7V4 464 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 FAM90A13PP0C7W8 464 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 FAM90A14PP0C7W9 464 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 FAM90A24PP0C7X0 464 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 OCM2P0CE71 109 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 OCMP0CE72 109 aaPredicted RBP12.56□□□□□ -0.4
PLOD3-216ENST00000489927 NFYBP25208 207 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 NANOS3P60323 173 aaKnown RBP12.56□□□□□ -0.4
PLOD3-216ENST00000489927 Q6P435 159 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 C8orf86Q6ZUL3 223 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 OR2W3Q7Z3T1 314 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 THNSL2Q86YJ6 484 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 ZDHHC13Q8IUH4 622 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 OR10AC1Q8NH08 325 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 OR56B4Q8NH76 319 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 OR9G1Q8NH87 305 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 TOMM40LQ969M1 308 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 RPEQ96AT9 228 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 EME1Q96AY2 570 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 SLC7A6OSQ96CW6 309 aaPredicted RBP12.56□□□□□ -0.4
PLOD3-216ENST00000489927 KIRREL1Q96J84 757 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 ENOPH1Q9UHY7 261 aa12.56□□□□□ -0.4
PLOD3-216ENST00000489927 KBTBD11-OT1A0A1B0GTJ5 212 aa12.55□□□□□ -0.4
PLOD3-216ENST00000489927 TMED1Q13445 227 aa12.55□□□□□ -0.4
PLOD3-216ENST00000489927 CDK5R1Q15078 307 aa12.55□□□□□ -0.4
PLOD3-216ENST00000489927 C5orf56Q8N8D9 126 aa12.55□□□□□ -0.4
PLOD3-216ENST00000489927 CHST4Q8NCG5 386 aa12.55□□□□□ -0.4
PLOD3-216ENST00000489927 OR51A4Q8NGJ6 313 aa12.55□□□□□ -0.4
PLOD3-216ENST00000489927 OR8J1Q8NGP2 316 aa12.55□□□□□ -0.4
PLOD3-216ENST00000489927 OR13C9Q8NGT0 318 aa12.55□□□□□ -0.4
PLOD3-216ENST00000489927 MCRIP2Q9BUT9 160 aaKnown RBP12.55□□□□□ -0.4
PLOD3-216ENST00000489927 NEK6Q9HC98 313 aa12.55□□□□□ -0.4
PLOD3-216ENST00000489927 OR6C3Q9NZP0 311 aa12.55□□□□□ -0.4
PLOD3-216ENST00000489927 LINC00527Q9UJ94 153 aa12.55□□□□□ -0.4
PLOD3-216ENST00000489927 NUDT19A8MXV4 375 aa12.54□□□□□ -0.4
PLOD3-216ENST00000489927 J3QR06 171 aa12.54□□□□□ -0.4
PLOD3-216ENST00000489927 DEGS1O15121 323 aa12.54□□□□□ -0.4
PLOD3-216ENST00000489927 IGHV3-7P01780 117 aa12.54□□□□□ -0.4
PLOD3-216ENST00000489927 MT-ND2P03891 347 aa12.54□□□□□ -0.4
PLOD3-216ENST00000489927 CGB3P0DN86 165 aa12.54□□□□□ -0.4
PLOD3-216ENST00000489927 CGB7P0DN87 165 aa12.54□□□□□ -0.4
PLOD3-216ENST00000489927 BNIP1Q12981 228 aa12.54□□□□□ -0.4
PLOD3-216ENST00000489927 DIAPH2-AS1Q14236 149 aa12.54□□□□□ -0.4
PLOD3-216ENST00000489927 HES1Q14469 280 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms