RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 MNDAP41218 407 aa11.86□□□□□ -0.51
FAM3D-204ENST00000489857 PTGFRP43088 359 aa11.86□□□□□ -0.51
FAM3D-204ENST00000489857 DGCR2P98153 550 aa11.86□□□□□ -0.51
FAM3D-204ENST00000489857 PDZK1IP1Q13113 114 aa11.86□□□□□ -0.51
FAM3D-204ENST00000489857 KPNB1Q14974 876 aaKnown RBP11.86□□□□□ -0.51
FAM3D-204ENST00000489857 C17orf58Q2M2W7 97 aa11.86□□□□□ -0.51
FAM3D-204ENST00000489857 CCDC144NLQ6NUI1 221 aa11.86□□□□□ -0.51
FAM3D-204ENST00000489857 SPATA24Q86W54 205 aa11.86□□□□□ -0.51
FAM3D-204ENST00000489857 GID4Q8IVV7 300 aa11.86□□□□□ -0.51
FAM3D-204ENST00000489857 RNF166Q96A37 237 aaPredicted RBP11.86□□□□□ -0.51
FAM3D-204ENST00000489857 RFT1Q96AA3 541 aa11.86□□□□□ -0.51
FAM3D-204ENST00000489857 COMMD4Q9H0A8 199 aa11.86□□□□□ -0.51
FAM3D-204ENST00000489857 ING3Q9NXR8 418 aa11.86□□□□□ -0.51
FAM3D-204ENST00000489857 STAB2Q8WWQ8 2551 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 TCRBV3S1A0A5B6 114 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 FUOMA2VDF0 154 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 NUDT19A8MXV4 375 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 SULT1C4O75897 302 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 CSN2P05814 226 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 OR2T7P0C7T2 308 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 NHLRC4P0CG21 123 aaPredicted RBP11.85□□□□□ -0.51
FAM3D-204ENST00000489857 FAM106CPP0CH98 169 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 PRKACBP22694 351 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 PRRX1P54821 245 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 ISL1P61371 349 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 FLOT2Q14254 428 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 NKAPLQ5M9Q1 402 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 Q6P435 159 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 UTS2BQ765I0 119 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 THNSL2Q86YJ6 484 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 C5orf56Q8N8D9 126 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 KLHL30-AS1Q8NEE0 82 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 OR4D6Q8NGJ1 314 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 OR56B4Q8NH76 319 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 CHPT1Q8WUD6 406 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 TFAP2CQ92754 450 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 UTP4Q969X6 686 aaKnown RBP11.85□□□□□ -0.51
FAM3D-204ENST00000489857 DUX3Q96PT4 197 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 ZFP57Q9NU63 452 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 WARS2Q9UGM6 360 aaKnown RBP11.85□□□□□ -0.51
FAM3D-204ENST00000489857 LINC00527Q9UJ94 153 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 U3KQK5 164 aa11.85□□□□□ -0.51
FAM3D-204ENST00000489857 KIAA2026Q5HYC2 2103 aa11.84□□□□□ -0.51
FAM3D-204ENST00000489857 A0A1W2PPI3 338 aa11.84□□□□□ -0.51
FAM3D-204ENST00000489857 ATP8B1O43520 1251 aa11.84□□□□□ -0.51
FAM3D-204ENST00000489857 KDM4BO94953 1096 aa11.84□□□□□ -0.51
FAM3D-204ENST00000489857 UBCP0CG48 685 aaKnown RBP11.84□□□□□ -0.51
FAM3D-204ENST00000489857 CGB3P0DN86 165 aa11.84□□□□□ -0.51
FAM3D-204ENST00000489857 CGB7P0DN87 165 aa11.84□□□□□ -0.51
FAM3D-204ENST00000489857 ZNF44P15621 663 aa11.84□□□□□ -0.51
FAM3D-204ENST00000489857 SLC6A1P30531 599 aa11.84□□□□□ -0.51
FAM3D-204ENST00000489857 HTR1FP30939 366 aa11.84□□□□□ -0.51
FAM3D-204ENST00000489857 SCN1BQ07699 218 aa11.84□□□□□ -0.51
FAM3D-204ENST00000489857 ATXN7L3Q14CW9 347 aaPredicted RBP11.84□□□□□ -0.51
FAM3D-204ENST00000489857 KRBOX4Q5JUW0 171 aa11.84□□□□□ -0.51
FAM3D-204ENST00000489857 UNQ9370/PRO34162Q6UXP9 181 aa11.84□□□□□ -0.51
FAM3D-204ENST00000489857 LHFPL2Q6ZUX7 228 aa11.84□□□□□ -0.51
FAM3D-204ENST00000489857 OR10H4Q8NGA5 316 aa11.84□□□□□ -0.51
FAM3D-204ENST00000489857 OR9G1Q8NH87 305 aa11.84□□□□□ -0.51
FAM3D-204ENST00000489857 TOMM40LQ969M1 308 aa11.84□□□□□ -0.51
FAM3D-204ENST00000489857 RPEQ96AT9 228 aa11.84□□□□□ -0.51
FAM3D-204ENST00000489857 FGGYQ96C11 551 aa11.84□□□□□ -0.51
FAM3D-204ENST00000489857 KIRREL1Q96J84 757 aa11.84□□□□□ -0.51
FAM3D-204ENST00000489857 PPIL3Q9H2H8 161 aaKnown RBP11.84□□□□□ -0.51
FAM3D-204ENST00000489857 KRT84Q9NSB2 600 aa11.84□□□□□ -0.51
FAM3D-204ENST00000489857 LSM4Q9Y4Z0 139 aaKnown RBP11.84□□□□□ -0.51
FAM3D-204ENST00000489857 DYNC2H1Q8NCM8 4307 aaKnown RBP11.83□□□□□ -0.52
FAM3D-204ENST00000489857 KBTBD11-OT1A0A1B0GTJ5 212 aa11.83□□□□□ -0.52
FAM3D-204ENST00000489857 ZNF729A6NN14 1252 aaPredicted RBP11.83□□□□□ -0.52
FAM3D-204ENST00000489857 SERPINE3A8MV23 424 aa11.83□□□□□ -0.52
FAM3D-204ENST00000489857 SLC33A1O00400 549 aaPredicted RBP11.83□□□□□ -0.52
FAM3D-204ENST00000489857 FAM107AO95990 144 aa11.83□□□□□ -0.52
FAM3D-204ENST00000489857 IGHV3-7P01780 117 aa11.83□□□□□ -0.52
FAM3D-204ENST00000489857 TMEM11P17152 192 aa11.83□□□□□ -0.52
FAM3D-204ENST00000489857 NFYBP25208 207 aa11.83□□□□□ -0.52
FAM3D-204ENST00000489857 ZNF85Q03923 595 aa11.83□□□□□ -0.52
FAM3D-204ENST00000489857 DIAPH2-AS1Q14236 149 aa11.83□□□□□ -0.52
FAM3D-204ENST00000489857 TP53I3Q53FA7 332 aa11.83□□□□□ -0.52
FAM3D-204ENST00000489857 ZNF695Q8IW36 515 aa11.83□□□□□ -0.52
FAM3D-204ENST00000489857 DRAM1Q8N682 238 aa11.83□□□□□ -0.52
FAM3D-204ENST00000489857 OR5D18Q8NGL1 313 aa11.83□□□□□ -0.52
FAM3D-204ENST00000489857 SPSB1Q96BD6 273 aa11.83□□□□□ -0.52
FAM3D-204ENST00000489857 RAX2Q96IS3 184 aa11.83□□□□□ -0.52
FAM3D-204ENST00000489857 OPALINQ96PE5 141 aa11.83□□□□□ -0.52
FAM3D-204ENST00000489857 SPACA5Q96QH8 159 aa11.83□□□□□ -0.52
FAM3D-204ENST00000489857 J3QR06 171 aa11.82□□□□□ -0.52
FAM3D-204ENST00000489857 FGF16O43320 207 aa11.82□□□□□ -0.52
FAM3D-204ENST00000489857 IGHG2P01859 326 aa11.82□□□□□ -0.52
FAM3D-204ENST00000489857 ZNF20P17024 532 aa11.82□□□□□ -0.52
FAM3D-204ENST00000489857 LUMP51884 338 aaPredicted RBP11.82□□□□□ -0.52
FAM3D-204ENST00000489857 HES1Q14469 280 aa11.82□□□□□ -0.52
FAM3D-204ENST00000489857 HNF4GQ14541 408 aa11.82□□□□□ -0.52
FAM3D-204ENST00000489857 CDK5R1Q15078 307 aa11.82□□□□□ -0.52
FAM3D-204ENST00000489857 TMEM244Q5VVB8 128 aa11.82□□□□□ -0.52
FAM3D-204ENST00000489857 KDM4DQ6B0I6 523 aa11.82□□□□□ -0.52
FAM3D-204ENST00000489857 SLC35E3Q7Z769 313 aa11.82□□□□□ -0.52
FAM3D-204ENST00000489857 OR2G2Q8NGZ5 317 aa11.82□□□□□ -0.52
FAM3D-204ENST00000489857 OR10AC1Q8NH08 325 aa11.82□□□□□ -0.52
FAM3D-204ENST00000489857 LEAP2Q969E1 77 aa11.82□□□□□ -0.52
FAM3D-204ENST00000489857 MBOAT4Q96T53 435 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms